RNA–Protein interactions for RNA: ENST00000338508.8

SHANK2-201, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 7,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-201ENST00000338508 C20orf173Q96LM9 149 aa8.84□□□□□ -0.99
SHANK2-201ENST00000338508 CLUHP3Q96NS8 147 aa8.84□□□□□ -0.99
SHANK2-201ENST00000338508 C6orf99Q4VX62 202 aa8.83□□□□□ -1
SHANK2-201ENST00000338508 GDF5OSQ5U4N7 250 aa8.83□□□□□ -1
SHANK2-201ENST00000338508 CCDC140Q96MF4 163 aa8.83□□□□□ -1
SHANK2-201ENST00000338508 LOC100131303A0A0U1RQF7 123 aa8.83□□□□□ -1
SHANK2-201ENST00000338508 FAM240AA0A1B0GVK7 77 aa8.83□□□□□ -1
SHANK2-201ENST00000338508 NANOS2P60321 138 aaKnown RBP8.83□□□□□ -1
SHANK2-201ENST00000338508 DEFB114Q30KQ6 69 aa8.83□□□□□ -1
SHANK2-201ENST00000338508 NEXN-AS1Q8NBZ9 246 aa8.83□□□□□ -1
SHANK2-201ENST00000338508 LINC00643Q86TS7 51 aa8.83□□□□□ -1
SHANK2-201ENST00000338508 RNASE8Q8TDE3 154 aaKnown RBP8.83□□□□□ -1
SHANK2-201ENST00000338508 A8MZ25 164 aa8.83□□□□□ -1
SHANK2-201ENST00000338508 NDUFC2-KCTD14E9PQ53 114 aa8.82□□□□□ -1
SHANK2-201ENST00000338508 IGLV2-8P01709 118 aa8.82□□□□□ -1
SHANK2-201ENST00000338508 SERP2Q8N6R1 65 aa8.82□□□□□ -1
SHANK2-201ENST00000338508 Q8N9L7 120 aa8.82□□□□□ -1
SHANK2-201ENST00000338508 PRYO14603 147 aa8.82□□□□□ -1
SHANK2-201ENST00000338508 KPRPQ5T749 579 aaPredicted RBP8.82□□□□□ -1
SHANK2-201ENST00000338508 TRAV10A0A0B4J240 114 aa8.81□□□□□ -1
SHANK2-201ENST00000338508 TRBV6-8A0A0A6YYG3 113 aa8.81□□□□□ -1
SHANK2-201ENST00000338508 DOPEY1Q5JWR5 2465 aa8.81□□□□□ -1
SHANK2-201ENST00000338508 Q6YL49 198 aa8.81□□□□□ -1
SHANK2-201ENST00000338508 HIGD1BQ9P298 99 aa8.81□□□□□ -1
SHANK2-201ENST00000338508 IGFL2Q6UWQ7 119 aa8.81□□□□□ -1
SHANK2-201ENST00000338508 MT-ATP8P03928 68 aa8.8□□□□□ -1
SHANK2-201ENST00000338508 KIAA1549LQ6ZVL6 1849 aa8.8□□□□□ -1
SHANK2-201ENST00000338508 SPINK1P00995 79 aa8.8□□□□□ -1
SHANK2-201ENST00000338508 SHISA2Q6UWI4 295 aa8.8□□□□□ -1
SHANK2-201ENST00000338508 C18orf65Q6ZTR6 163 aa8.8□□□□□ -1
SHANK2-201ENST00000338508 IGLV2-11P01706 119 aa8.8□□□□□ -1
SHANK2-201ENST00000338508 IGLV1-47P01700 117 aa8.79□□□□□ -1
SHANK2-201ENST00000338508 CFAP126Q5VTH2 177 aa8.79□□□□□ -1
SHANK2-201ENST00000338508 TRBV6-5A0A0K0K1A5 114 aa8.79□□□□□ -1
SHANK2-201ENST00000338508 TMEM89A2RUT3 159 aa8.79□□□□□ -1
SHANK2-201ENST00000338508 SMIM9A6NGZ8 99 aa8.79□□□□□ -1
SHANK2-201ENST00000338508 COA6Q5JTJ3 125 aaKnown RBP8.79□□□□□ -1
SHANK2-201ENST00000338508 ZNF706Q9Y5V0 76 aaPredicted RBP8.79□□□□□ -1
SHANK2-201ENST00000338508 RAI1Q7Z5J4 1906 aaPredicted RBP8.78□□□□□ -1
SHANK2-201ENST00000338508 ABCA2Q9BZC7 2435 aa8.78□□□□□ -1
SHANK2-201ENST00000338508 MIFP14174 115 aa8.78□□□□□ -1
SHANK2-201ENST00000338508 SPATA12Q7Z6I5 190 aa8.78□□□□□ -1
SHANK2-201ENST00000338508 SPANXB1Q9NS25 103 aaPredicted RBP8.78□□□□□ -1
SHANK2-201ENST00000338508 TMEM223A0PJW6 202 aa8.78□□□□□ -1
SHANK2-201ENST00000338508 LINC00322Q6ZN03 302 aaPredicted RBP8.78□□□□□ -1
SHANK2-201ENST00000338508 TNFRSF13BO14836 293 aaPredicted RBP8.78□□□□□ -1
SHANK2-201ENST00000338508 HIVEP3Q5T1R4 2406 aa8.77□□□□□ -1
SHANK2-201ENST00000338508 OXLD1Q5BKU9 147 aa8.77□□□□□ -1
SHANK2-201ENST00000338508 TP73-AS1Q9UF72 201 aa8.77□□□□□ -1.01
SHANK2-201ENST00000338508 TRBV27A0A0K0K1C4 114 aa8.77□□□□□ -1.01
SHANK2-201ENST00000338508 NUPR2A6NF83 97 aa8.77□□□□□ -1.01
SHANK2-201ENST00000338508 AGRNO00468 2067 aa8.77□□□□□ -1.01
SHANK2-201ENST00000338508 LINC00308Q8TCZ7 52 aa8.77□□□□□ -1.01
SHANK2-201ENST00000338508 CELA1Q9UNI1 258 aa8.77□□□□□ -1.01
SHANK2-201ENST00000338508 IGLV4-3A0A075B6K6 122 aa8.77□□□□□ -1.01
SHANK2-201ENST00000338508 IGLV2-14P01704 120 aa8.77□□□□□ -1.01
SHANK2-201ENST00000338508 ESRGQ1W209 222 aa8.77□□□□□ -1.01
SHANK2-201ENST00000338508 BDP1A6H8Y1 2624 aa8.77□□□□□ -1.01
SHANK2-201ENST00000338508 Q8NA96 180 aa8.76□□□□□ -1.01
SHANK2-201ENST00000338508 NUP210LQ5VU65 1888 aa8.76□□□□□ -1.01
SHANK2-201ENST00000338508 Q6ZSV7 163 aa8.76□□□□□ -1.01
SHANK2-201ENST00000338508 TRIAP1O43715 76 aa8.76□□□□□ -1.01
SHANK2-201ENST00000338508 MSMPQ1L6U9 139 aa8.76□□□□□ -1.01
SHANK2-201ENST00000338508 Q6ZQY7 126 aa8.76□□□□□ -1.01
SHANK2-201ENST00000338508 A0A1W2PNU3 283 aaPredicted RBP8.75□□□□□ -1.01
SHANK2-201ENST00000338508 ZNF843Q8N446 348 aa8.75□□□□□ -1.01
SHANK2-201ENST00000338508 SMR3AQ99954 134 aa8.75□□□□□ -1.01
SHANK2-201ENST00000338508 PLA2G1BP04054 148 aaKnown RBP8.75□□□□□ -1.01
SHANK2-201ENST00000338508 LMO4P61968 165 aa8.75□□□□□ -1.01
SHANK2-201ENST00000338508 C10orf25Q5T742 122 aa8.75□□□□□ -1.01
SHANK2-201ENST00000338508 LOC107984640A0A0U1RRK4 108 aa8.74□□□□□ -1.01
SHANK2-201ENST00000338508 PRORYQ9H606 182 aa8.74□□□□□ -1.01
SHANK2-201ENST00000338508 IBA57-AS1B1ANH7 110 aa8.74□□□□□ -1.01
SHANK2-201ENST00000338508 K7EQG2 157 aa8.74□□□□□ -1.01
SHANK2-201ENST00000338508 NOTCH2Q04721 2471 aa8.73□□□□□ -1.01
SHANK2-201ENST00000338508 IGLV4-69A0A075B6H9 119 aa8.73□□□□□ -1.01
SHANK2-201ENST00000338508 UQCRQO14949 82 aa8.73□□□□□ -1.01
SHANK2-201ENST00000338508 FAM19A3Q7Z5A8 133 aa8.73□□□□□ -1.01
SHANK2-201ENST00000338508 C19orf71A6NCJ1 209 aa8.73□□□□□ -1.01
SHANK2-201ENST00000338508 RBX1P62877 108 aa8.73□□□□□ -1.01
SHANK2-201ENST00000338508 IGHV6-1A0A0B4J1U7 121 aa8.73□□□□□ -1.01
SHANK2-201ENST00000338508 ZNF22P17026 224 aaPredicted RBP8.73□□□□□ -1.01
SHANK2-201ENST00000338508 KRTAP27-1Q3LI81 207 aa8.73□□□□□ -1.01
SHANK2-201ENST00000338508 H7C423 109 aa8.72□□□□□ -1.01
SHANK2-201ENST00000338508 IGLV5-52A0A0A0MRZ9 124 aa8.72□□□□□ -1.01
SHANK2-201ENST00000338508 V9GYY9 64 aa8.72□□□□□ -1.01
SHANK2-201ENST00000338508 TIMM17BO60830 172 aa8.72□□□□□ -1.01
SHANK2-201ENST00000338508 M0R378 163 aa8.72□□□□□ -1.01
SHANK2-201ENST00000338508 MAPKAPK5-AS1Q8N8E1 139 aa8.72□□□□□ -1.01
SHANK2-201ENST00000338508 DHRS4-AS1Q9P1J3 65 aa8.71□□□□□ -1.02
SHANK2-201ENST00000338508 SMIM11BQ8TCY0 68 aa8.71□□□□□ -1.02
SHANK2-201ENST00000338508 CCDC168Q8NDH2 2452 aa8.7□□□□□ -1.02
SHANK2-201ENST00000338508 M0QXV9 152 aa8.7□□□□□ -1.02
SHANK2-201ENST00000338508 Q6Q795 121 aa8.7□□□□□ -1.02
SHANK2-201ENST00000338508 ALPK3Q96L96 1907 aa8.7□□□□□ -1.02
SHANK2-201ENST00000338508 DEFB116Q30KQ4 102 aa8.7□□□□□ -1.02
SHANK2-201ENST00000338508 M0QY20 66 aa8.69□□□□□ -1.02
SHANK2-201ENST00000338508 MRPS12O15235 138 aaKnown RBP8.69□□□□□ -1.02
SHANK2-201ENST00000338508 BRI3O95415 125 aa8.69□□□□□ -1.02
SHANK2-201ENST00000338508 SPRY4Q9C004 299 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms