RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 RNASE3P12724 160 aaKnown RBP9.92□□□□□ -0.82
COL2A1-201ENST00000337299 WFDC11Q8NEX6 87 aa9.92□□□□□ -0.82
COL2A1-201ENST00000337299 IGLV4-69A0A075B6H9 119 aa9.91□□□□□ -0.82
COL2A1-201ENST00000337299 TIRAPP58753 221 aa9.91□□□□□ -0.82
COL2A1-201ENST00000337299 NCR3O14931 201 aa9.91□□□□□ -0.82
COL2A1-201ENST00000337299 CSDC2Q9Y534 153 aaKnown RBP9.91□□□□□ -0.82
COL2A1-201ENST00000337299 LINC00308Q8TCZ7 52 aa9.91□□□□□ -0.82
COL2A1-201ENST00000337299 ODF3Q96PU9 254 aa9.91□□□□□ -0.82
COL2A1-201ENST00000337299 IGHG2P01859 326 aa9.9□□□□□ -0.82
COL2A1-201ENST00000337299 XCL1P47992 114 aa9.9□□□□□ -0.82
COL2A1-201ENST00000337299 IGIPA6NJ69 53 aa9.9□□□□□ -0.82
COL2A1-201ENST00000337299 USP17L23D6RBM5 183 aa9.9□□□□□ -0.82
COL2A1-201ENST00000337299 MED14OSP0DP75 135 aa9.9□□□□□ -0.82
COL2A1-201ENST00000337299 A0A096LPF7 62 aa9.9□□□□□ -0.83
COL2A1-201ENST00000337299 ZFP36P26651 326 aaKnown RBP9.89□□□□□ -0.83
COL2A1-201ENST00000337299 POLR2KP53803 58 aaKnown RBP9.89□□□□□ -0.83
COL2A1-201ENST00000337299 TRAV25A0A0B4J276 109 aa9.89□□□□□ -0.83
COL2A1-201ENST00000337299 POM121L12Q8N7R1 296 aa9.89□□□□□ -0.83
COL2A1-201ENST00000337299 WFDC9Q8NEX5 89 aa9.89□□□□□ -0.83
COL2A1-201ENST00000337299 COX7B2Q8TF08 81 aa9.89□□□□□ -0.83
COL2A1-201ENST00000337299 H0YGX0 51 aa9.89□□□□□ -0.83
COL2A1-201ENST00000337299 ELANEP08246 267 aa9.89□□□□□ -0.83
COL2A1-201ENST00000337299 M0QY20 66 aa9.88□□□□□ -0.83
COL2A1-201ENST00000337299 MPLKIPQ8TAP9 179 aa9.88□□□□□ -0.83
COL2A1-201ENST00000337299 IMUPQ9GZP8 106 aa9.88□□□□□ -0.83
COL2A1-201ENST00000337299 DEFB136Q30KP8 78 aa9.88□□□□□ -0.83
COL2A1-201ENST00000337299 APRG1Q8IVJ8 170 aa9.88□□□□□ -0.83
COL2A1-201ENST00000337299 RPL18AQ02543 176 aaKnown RBP9.88□□□□□ -0.83
COL2A1-201ENST00000337299 ENHOQ6UWT2 76 aa9.88□□□□□ -0.83
COL2A1-201ENST00000337299 LINC00467Q9BRT7 94 aa9.88□□□□□ -0.83
COL2A1-201ENST00000337299 TRBV27A0A0K0K1C4 114 aa9.87□□□□□ -0.83
COL2A1-201ENST00000337299 CLPSL1A2RUU4 121 aa9.87□□□□□ -0.83
COL2A1-201ENST00000337299 MSMBP08118 114 aa9.87□□□□□ -0.83
COL2A1-201ENST00000337299 HIST2H2BCQ6DN03 193 aa9.87□□□□□ -0.83
COL2A1-201ENST00000337299 HIST2H2BDQ6DRA6 164 aa9.87□□□□□ -0.83
COL2A1-201ENST00000337299 SERP2Q8N6R1 65 aa9.87□□□□□ -0.83
COL2A1-201ENST00000337299 IGHV4-4A0A075B6R2 117 aa9.87□□□□□ -0.83
COL2A1-201ENST00000337299 ADAMTSL4-AS1Q5T5F5 129 aa9.87□□□□□ -0.83
COL2A1-201ENST00000337299 LRRC75A-AS1Q8N1F1 130 aa9.87□□□□□ -0.83
COL2A1-201ENST00000337299 TMEM258P61165 79 aa9.87□□□□□ -0.83
COL2A1-201ENST00000337299 SS18Q15532 418 aa9.87□□□□□ -0.83
COL2A1-201ENST00000337299 NBEAQ8NFP9 2946 aa9.86□□□□□ -0.83
COL2A1-201ENST00000337299 FAM236DA0A1B0GTK5 79 aa9.86□□□□□ -0.83
COL2A1-201ENST00000337299 PRM2P04554 102 aa9.86□□□□□ -0.83
COL2A1-201ENST00000337299 FAM236CP0DP71 79 aa9.86□□□□□ -0.83
COL2A1-201ENST00000337299 C5orf56Q8N8D9 126 aa9.86□□□□□ -0.83
COL2A1-201ENST00000337299 CRYGDP07320 174 aa9.85□□□□□ -0.83
COL2A1-201ENST00000337299 LINC00526Q96FQ7 95 aa9.85□□□□□ -0.83
COL2A1-201ENST00000337299 IGHV4-61A0A0C4DH41 118 aa9.85□□□□□ -0.83
COL2A1-201ENST00000337299 TSHBP01222 138 aa9.85□□□□□ -0.83
COL2A1-201ENST00000337299 SNURFQ9Y675 71 aa9.84□□□□□ -0.83
COL2A1-201ENST00000337299 UPK3BQ9BT76 320 aa9.84□□□□□ -0.83
COL2A1-201ENST00000337299 NOP10Q9NPE3 64 aaKnown RBP9.84□□□□□ -0.83
COL2A1-201ENST00000337299 NHLRC4P0CG21 123 aaPredicted RBP9.83□□□□□ -0.84
COL2A1-201ENST00000337299 SCXQ7RTU7 201 aa9.83□□□□□ -0.84
COL2A1-201ENST00000337299 GPHB5Q86YW7 130 aa9.83□□□□□ -0.84
COL2A1-201ENST00000337299 FAM240AA0A1B0GVK7 77 aa9.83□□□□□ -0.84
COL2A1-201ENST00000337299 FRYLO94915 3013 aa9.83□□□□□ -0.84
COL2A1-201ENST00000337299 IGHV4OR15-8A0A075B7B6 117 aa9.83□□□□□ -0.84
COL2A1-201ENST00000337299 A0A087WW49 117 aa9.83□□□□□ -0.84
COL2A1-201ENST00000337299 LY6LH3BQJ8 138 aa9.83□□□□□ -0.84
COL2A1-201ENST00000337299 A0A0J9YX75 114 aa9.82□□□□□ -0.84
COL2A1-201ENST00000337299 F8W735 103 aaPredicted RBP9.82□□□□□ -0.84
COL2A1-201ENST00000337299 PF4P02776 101 aa9.82□□□□□ -0.84
COL2A1-201ENST00000337299 MRGPRG-AS1Q2M3A8 158 aa9.82□□□□□ -0.84
COL2A1-201ENST00000337299 IGLV10-54A0A075B6I4 117 aa9.82□□□□□ -0.84
COL2A1-201ENST00000337299 DSPP15924 2871 aaKnown RBP9.82□□□□□ -0.84
COL2A1-201ENST00000337299 IGHV4-30-2A0A087WSY4 118 aa9.82□□□□□ -0.84
COL2A1-201ENST00000337299 IGHV4-38-2P0DP08 117 aa9.82□□□□□ -0.84
COL2A1-201ENST00000337299 Q96MF0 132 aa9.81□□□□□ -0.84
COL2A1-201ENST00000337299 ZNF292O60281 2723 aa9.8□□□□□ -0.84
COL2A1-201ENST00000337299 CDSNQ15517 529 aa9.8□□□□□ -0.84
COL2A1-201ENST00000337299 HECTD1Q9ULT8 2610 aa9.8□□□□□ -0.84
COL2A1-201ENST00000337299 C19orf84I3L1E1 186 aa9.8□□□□□ -0.84
COL2A1-201ENST00000337299 LINC01356Q8N9X3 169 aa9.8□□□□□ -0.84
COL2A1-201ENST00000337299 PSMG3-AS1Q96PY0 264 aa9.8□□□□□ -0.84
COL2A1-201ENST00000337299 DSCR9P59020 149 aa9.8□□□□□ -0.84
COL2A1-201ENST00000337299 IGHV4-59P01825 116 aa9.79□□□□□ -0.84
COL2A1-201ENST00000337299 JMJD7-PLA2G4BH0Y9G9 81 aa9.79□□□□□ -0.84
COL2A1-201ENST00000337299 IGHV4-28A0A0C4DH34 117 aa9.79□□□□□ -0.84
COL2A1-201ENST00000337299 NDUFA1O15239 70 aa9.79□□□□□ -0.84
COL2A1-201ENST00000337299 SLURP1P55000 103 aa9.79□□□□□ -0.84
COL2A1-201ENST00000337299 ODF3BA8MYP8 253 aa9.78□□□□□ -0.84
COL2A1-201ENST00000337299 TRBV6-5A0A0K0K1A5 114 aa9.78□□□□□ -0.84
COL2A1-201ENST00000337299 KIR2DL5BQ8NHK3 375 aa9.78□□□□□ -0.84
COL2A1-201ENST00000337299 COX8CQ7Z4L0 72 aa9.77□□□□□ -0.85
COL2A1-201ENST00000337299 SIRPDQ9H106 197 aa9.77□□□□□ -0.85
COL2A1-201ENST00000337299 NDUFC2O95298 119 aa9.77□□□□□ -0.85
COL2A1-201ENST00000337299 CXCL5P42830 114 aa9.77□□□□□ -0.85
COL2A1-201ENST00000337299 ANGP03950 147 aaKnown RBP9.76□□□□□ -0.85
COL2A1-201ENST00000337299 EDN2P20800 178 aa9.75□□□□□ -0.85
COL2A1-201ENST00000337299 DEFB105AQ8NG35 78 aa9.75□□□□□ -0.85
COL2A1-201ENST00000337299 C4orf26Q17RF5 130 aa9.74□□□□□ -0.85
COL2A1-201ENST00000337299 DEFB112Q30KQ8 113 aa9.74□□□□□ -0.85
COL2A1-201ENST00000337299 TRBV7-7A0A0K0K1E9 115 aa9.74□□□□□ -0.85
COL2A1-201ENST00000337299 K7EQD1 137 aa9.74□□□□□ -0.85
COL2A1-201ENST00000337299 MRPS36P82909 103 aaKnown RBP9.74□□□□□ -0.85
COL2A1-201ENST00000337299 SMIM11BQ8TCY0 68 aa9.74□□□□□ -0.85
COL2A1-201ENST00000337299 FBXL19-AS1Q494R0 122 aa9.73□□□□□ -0.85
COL2A1-201ENST00000337299 SBSPONQ8IVN8 264 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms