RNA–Protein interactions for RNA: ENST00000333001.10

CMTM1-203, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 883 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-203ENST00000333001 GAS8-AS1O95177 125 aa7.94□□□□□ -1.14
CMTM1-203ENST00000333001 RPS10P46783 165 aaKnown RBP7.94□□□□□ -1.14
CMTM1-203ENST00000333001 CAMPP49913 170 aa7.94□□□□□ -1.14
CMTM1-203ENST00000333001 PNRC1Q12796 327 aaPredicted RBP7.94□□□□□ -1.14
CMTM1-203ENST00000333001 SCXQ7RTU7 201 aa7.94□□□□□ -1.14
CMTM1-203ENST00000333001 MRPL52Q86TS9 123 aaKnown RBP7.94□□□□□ -1.14
CMTM1-203ENST00000333001 TMEM18Q96B42 140 aa7.94□□□□□ -1.14
CMTM1-203ENST00000333001 C20orf78Q9BR46 151 aa7.94□□□□□ -1.14
CMTM1-203ENST00000333001 SRRM2Q9UQ35 2752 aaKnown RBP7.93□□□□□ -1.14
CMTM1-203ENST00000333001 TRBV24-1A0A075B6N3 115 aa7.93□□□□□ -1.14
CMTM1-203ENST00000333001 CKS2P33552 79 aa7.93□□□□□ -1.14
CMTM1-203ENST00000333001 HBBP68871 147 aa7.93□□□□□ -1.14
CMTM1-203ENST00000333001 MRPL51Q4U2R6 128 aaKnown RBP7.93□□□□□ -1.14
CMTM1-203ENST00000333001 LINC00528Q8N1L1 170 aa7.93□□□□□ -1.14
CMTM1-203ENST00000333001 NRACQ8N912 160 aa7.93□□□□□ -1.14
CMTM1-203ENST00000333001 CHCHD10Q8WYQ3 142 aaPredicted RBP7.93□□□□□ -1.14
CMTM1-203ENST00000333001 SMKR1H3BMG3 65 aa7.92□□□□□ -1.14
CMTM1-203ENST00000333001 J3QL48 77 aa7.92□□□□□ -1.14
CMTM1-203ENST00000333001 CCL25O15444 150 aa7.92□□□□□ -1.14
CMTM1-203ENST00000333001 PPBPP02775 128 aa7.92□□□□□ -1.14
CMTM1-203ENST00000333001 RPL32P62910 135 aaKnown RBP7.92□□□□□ -1.14
CMTM1-203ENST00000333001 SS18Q15532 418 aa7.92□□□□□ -1.14
CMTM1-203ENST00000333001 ATP5L2Q7Z4Y8 100 aa7.92□□□□□ -1.14
CMTM1-203ENST00000333001 ZNF664Q8N3J9 261 aa7.92□□□□□ -1.14
CMTM1-203ENST00000333001 CIRBP-AS1Q8TBR5 109 aa7.92□□□□□ -1.14
CMTM1-203ENST00000333001 CDC42SE2Q9NRR3 84 aa7.92□□□□□ -1.14
CMTM1-203ENST00000333001 CSDC2Q9Y534 153 aaKnown RBP7.92□□□□□ -1.14
CMTM1-203ENST00000333001 IGHV3-64A0A075B6Q5 118 aa7.91□□□□□ -1.14
CMTM1-203ENST00000333001 PHOX2AO14813 284 aa7.91□□□□□ -1.14
CMTM1-203ENST00000333001 MT-ND4LP03901 98 aa7.91□□□□□ -1.14
CMTM1-203ENST00000333001 MRPL54Q6P161 138 aaKnown RBP7.91□□□□□ -1.14
CMTM1-203ENST00000333001 SDIM1Q6ZPB5 146 aa7.91□□□□□ -1.14
CMTM1-203ENST00000333001 ANAPC16Q96DE5 110 aa7.91□□□□□ -1.14
CMTM1-203ENST00000333001 LINC00959A0A1B0GUT2 108 aa7.9□□□□□ -1.14
CMTM1-203ENST00000333001 A0A1B0GXF2 115 aa7.9□□□□□ -1.14
CMTM1-203ENST00000333001 FLG2Q5D862 2391 aaPredicted RBP7.9□□□□□ -1.15
CMTM1-203ENST00000333001 TNFRSF6BO95407 300 aa7.89□□□□□ -1.15
CMTM1-203ENST00000333001 CLLU1Q5K131 121 aa7.89□□□□□ -1.15
CMTM1-203ENST00000333001 TIMM21Q9BVV7 248 aa7.89□□□□□ -1.15
CMTM1-203ENST00000333001 GVQW2A0A096LPI5 108 aaPredicted RBP7.88□□□□□ -1.15
CMTM1-203ENST00000333001 C1orf196B1AJZ1 125 aa7.88□□□□□ -1.15
CMTM1-203ENST00000333001 D6R8Y8 96 aa7.88□□□□□ -1.15
CMTM1-203ENST00000333001 XCL1P47992 114 aa7.88□□□□□ -1.15
CMTM1-203ENST00000333001 FOXI1Q12951 378 aa7.88□□□□□ -1.15
CMTM1-203ENST00000333001 CD164L2Q6UWJ8 174 aa7.88□□□□□ -1.15
CMTM1-203ENST00000333001 C15orf56Q8N910 161 aa7.88□□□□□ -1.15
CMTM1-203ENST00000333001 PKIGQ9Y2B9 76 aa7.88□□□□□ -1.15
CMTM1-203ENST00000333001 IGHV1-58A0A0C4DH39 117 aa7.87□□□□□ -1.15
CMTM1-203ENST00000333001 ORMDL3Q8N138 153 aa7.87□□□□□ -1.15
CMTM1-203ENST00000333001 DPH3Q96FX2 82 aa7.87□□□□□ -1.15
CMTM1-203ENST00000333001 SMIM2Q9BVW6 85 aa7.87□□□□□ -1.15
CMTM1-203ENST00000333001 LAMTOR2Q9Y2Q5 125 aa7.87□□□□□ -1.15
CMTM1-203ENST00000333001 UBE2D4Q9Y2X8 147 aa7.87□□□□□ -1.15
CMTM1-203ENST00000333001 SLPIP03973 132 aa7.86□□□□□ -1.15
CMTM1-203ENST00000333001 CIRBPQ14011 172 aaKnown RBP7.86□□□□□ -1.15
CMTM1-203ENST00000333001 UQCC3Q6UW78 93 aa7.86□□□□□ -1.15
CMTM1-203ENST00000333001 TMEM136Q6ZRR5 245 aa7.86□□□□□ -1.15
CMTM1-203ENST00000333001 RAB5AP20339 215 aa7.85□□□□□ -1.15
CMTM1-203ENST00000333001 HIGD2BQ4VC39 106 aa7.85□□□□□ -1.15
CMTM1-203ENST00000333001 PRELID3AQ96N28 172 aa7.85□□□□□ -1.15
CMTM1-203ENST00000333001 SPANXA1Q9NS26 97 aa7.85□□□□□ -1.15
CMTM1-203ENST00000333001 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.85□□□□□ -1.15
CMTM1-203ENST00000333001 ZNF561-AS1K7EIQ3 104 aa7.84□□□□□ -1.15
CMTM1-203ENST00000333001 NPYP01303 97 aa7.84□□□□□ -1.15
CMTM1-203ENST00000333001 MALP21145 153 aa7.84□□□□□ -1.15
CMTM1-203ENST00000333001 IMMP2LQ96T52 175 aa7.84□□□□□ -1.15
CMTM1-203ENST00000333001 PRSS47A8MTI9 375 aa7.83□□□□□ -1.16
CMTM1-203ENST00000333001 COX7A2LO14548 114 aa7.83□□□□□ -1.16
CMTM1-203ENST00000333001 LINC00474Q9P2X8 69 aa7.83□□□□□ -1.16
CMTM1-203ENST00000333001 TRAV13-1A0A0B4J241 112 aa7.82□□□□□ -1.16
CMTM1-203ENST00000333001 APOMO95445 188 aa7.82□□□□□ -1.16
CMTM1-203ENST00000333001 RPL37AP61513 92 aaKnown RBP7.82□□□□□ -1.16
CMTM1-203ENST00000333001 MRPS36P82909 103 aaKnown RBP7.82□□□□□ -1.16
CMTM1-203ENST00000333001 COX6A2Q02221 97 aa7.82□□□□□ -1.16
CMTM1-203ENST00000333001 SPACA4Q8TDM5 124 aa7.82□□□□□ -1.16
CMTM1-203ENST00000333001 CTDSP1Q9GZU7 261 aa7.82□□□□□ -1.16
CMTM1-203ENST00000333001 MAP1LC3AQ9H492 121 aa7.82□□□□□ -1.16
CMTM1-203ENST00000333001 A0A087WYN8 130 aa7.81□□□□□ -1.16
CMTM1-203ENST00000333001 TMEM218A2RU14 115 aa7.81□□□□□ -1.16
CMTM1-203ENST00000333001 RPL39P62891 51 aaKnown RBP7.81□□□□□ -1.16
CMTM1-203ENST00000333001 Q6ZUT4 128 aa7.81□□□□□ -1.16
CMTM1-203ENST00000333001 CARD19Q96LW7 228 aa7.81□□□□□ -1.16
CMTM1-203ENST00000333001 TRAV9-1A0A075B6T8 112 aa7.8□□□□□ -1.16
CMTM1-203ENST00000333001 KRTAP29-1A8MX34 341 aaPredicted RBP7.8□□□□□ -1.16
CMTM1-203ENST00000333001 PANO1I0J062 215 aa7.8□□□□□ -1.16
CMTM1-203ENST00000333001 K7EMI3 77 aa7.8□□□□□ -1.16
CMTM1-203ENST00000333001 IFI27P40305 119 aaPredicted RBP7.8□□□□□ -1.16
CMTM1-203ENST00000333001 SYCNQ0VAF6 134 aa7.8□□□□□ -1.16
CMTM1-203ENST00000333001 RNASE13Q5GAN3 156 aaKnown RBP7.8□□□□□ -1.16
CMTM1-203ENST00000333001 PRSS3P2Q8NHM4 247 aa7.8□□□□□ -1.16
CMTM1-203ENST00000333001 PLAC8Q9NZF1 115 aa7.8□□□□□ -1.16
CMTM1-203ENST00000333001 PYGO1Q9Y3Y4 419 aa7.8□□□□□ -1.16
CMTM1-203ENST00000333001 G0S2P27469 103 aa7.79□□□□□ -1.16
CMTM1-203ENST00000333001 KRTAP10-4P60372 401 aaPredicted RBP7.79□□□□□ -1.16
CMTM1-203ENST00000333001 IFITM2Q01629 132 aa7.79□□□□□ -1.16
CMTM1-203ENST00000333001 SERTAD4-AS1Q5TG53 156 aa7.79□□□□□ -1.16
CMTM1-203ENST00000333001 C2orf48Q96LS8 159 aa7.79□□□□□ -1.16
CMTM1-203ENST00000333001 SEC11CQ9BY50 192 aa7.79□□□□□ -1.16
CMTM1-203ENST00000333001 HMCN2Q8NDA2 5059 aa7.79□□□□□ -1.16
CMTM1-203ENST00000333001 UBR4Q5T4S7 5183 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms