RNA–Protein interactions for RNA: ENST00000330687.8

CMTM4-201, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 3,414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-201ENST00000330687 CDSNQ15517 529 aa15.04■□□□□ -0
CMTM4-201ENST00000330687 CENPEQ02224 2701 aa15.03■□□□□ -0
CMTM4-201ENST00000330687 PTPN13Q12923 2485 aa15.03■□□□□ -0
CMTM4-201ENST00000330687 SOSTDC1Q6X4U4 206 aa15.03■□□□□ -0
CMTM4-201ENST00000330687 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.03■□□□□ -0
CMTM4-201ENST00000330687 FAM19A4Q96LR4 140 aa15.03■□□□□ -0
CMTM4-201ENST00000330687 IGHV3OR16-12A0A075B7B8 117 aa15.03■□□□□ -0
CMTM4-201ENST00000330687 SNRPD3P62318 126 aaKnown RBP15.03■□□□□ -0
CMTM4-201ENST00000330687 Q8NA96 180 aa15.02■□□□□ -0
CMTM4-201ENST00000330687 BPESC1Q9GZL8 116 aa15.02■□□□□ -0
CMTM4-201ENST00000330687 IGHG2P01859 326 aa15.02■□□□□ -0
CMTM4-201ENST00000330687 SLPIP03973 132 aa15.02■□□□□ -0
CMTM4-201ENST00000330687 INAFM2P0DMQ5 153 aa15.02■□□□□ -0
CMTM4-201ENST00000330687 C9orf85Q96MD7 179 aa15.02■□□□□ -0
CMTM4-201ENST00000330687 C9orf129Q5T035 196 aaKnown RBP15.01□□□□□ -0.01
CMTM4-201ENST00000330687 CRYBG3Q68DQ2 2970 aa15.01□□□□□ -0.01
CMTM4-201ENST00000330687 Q6ZSN1 163 aa15.01□□□□□ -0.01
CMTM4-201ENST00000330687 JMJD1CQ15652 2540 aa15□□□□□ -0.01
CMTM4-201ENST00000330687 MALP21145 153 aa15□□□□□ -0.01
CMTM4-201ENST00000330687 H3BUX3 64 aa14.99□□□□□ -0.01
CMTM4-201ENST00000330687 NCR3O14931 201 aa14.99□□□□□ -0.01
CMTM4-201ENST00000330687 FAM104AQ969W3 186 aa14.99□□□□□ -0.01
CMTM4-201ENST00000330687 ZFYVE26Q68DK2 2539 aa14.99□□□□□ -0.01
CMTM4-201ENST00000330687 UBE2D4Q9Y2X8 147 aa14.98□□□□□ -0.01
CMTM4-201ENST00000330687 CRPP02741 224 aa14.98□□□□□ -0.01
CMTM4-201ENST00000330687 RPL18AQ02543 176 aaKnown RBP14.98□□□□□ -0.01
CMTM4-201ENST00000330687 C2orf48Q96LS8 159 aa14.98□□□□□ -0.01
CMTM4-201ENST00000330687 IGHV3-53P01767 116 aa14.97□□□□□ -0.01
CMTM4-201ENST00000330687 C10orf99Q6UWK7 81 aa14.97□□□□□ -0.01
CMTM4-201ENST00000330687 F5H768 121 aa14.97□□□□□ -0.01
CMTM4-201ENST00000330687 DPH3Q96FX2 82 aa14.97□□□□□ -0.01
CMTM4-201ENST00000330687 LINC01600Q96MT4 127 aa14.97□□□□□ -0.01
CMTM4-201ENST00000330687 C11orf68Q9H3H3 251 aaKnown RBP14.97□□□□□ -0.01
CMTM4-201ENST00000330687 LINC00846Q9NV44 126 aa14.97□□□□□ -0.01
CMTM4-201ENST00000330687 APRG1Q8IVJ8 170 aa14.96□□□□□ -0.01
CMTM4-201ENST00000330687 NDUFA1O15239 70 aa14.96□□□□□ -0.01
CMTM4-201ENST00000330687 LY6DQ14210 128 aa14.96□□□□□ -0.01
CMTM4-201ENST00000330687 TRAV23DV6A0A075B6W5 121 aa14.95□□□□□ -0.02
CMTM4-201ENST00000330687 CRYGAP11844 174 aa14.95□□□□□ -0.02
CMTM4-201ENST00000330687 HILS1P60008 231 aa14.95□□□□□ -0.02
CMTM4-201ENST00000330687 CSMD2Q7Z408 3487 aa14.95□□□□□ -0.02
CMTM4-201ENST00000330687 USP17L23D6RBM5 183 aa14.95□□□□□ -0.02
CMTM4-201ENST00000330687 C5orf38Q86SI9 138 aa14.95□□□□□ -0.02
CMTM4-201ENST00000330687 HIVEP3Q5T1R4 2406 aa14.95□□□□□ -0.02
CMTM4-201ENST00000330687 PYGO1Q9Y3Y4 419 aa14.94□□□□□ -0.02
CMTM4-201ENST00000330687 LECT2O14960 151 aa14.94□□□□□ -0.02
CMTM4-201ENST00000330687 LINC00158P58513 81 aa14.94□□□□□ -0.02
CMTM4-201ENST00000330687 A0A087WYN8 130 aa14.94□□□□□ -0.02
CMTM4-201ENST00000330687 CHCHD7Q9BUK0 85 aa14.94□□□□□ -0.02
CMTM4-201ENST00000330687 TLN2Q9Y4G6 2542 aa14.93□□□□□ -0.02
CMTM4-201ENST00000330687 BSNQ9UPA5 3926 aa14.93□□□□□ -0.02
CMTM4-201ENST00000330687 USP9XQ93008 2570 aaPredicted RBP14.93□□□□□ -0.02
CMTM4-201ENST00000330687 PFN2P35080 140 aa14.93□□□□□ -0.02
CMTM4-201ENST00000330687 CFHR3Q02985 330 aa14.93□□□□□ -0.02
CMTM4-201ENST00000330687 IGF2-ASQ6U949 168 aa14.93□□□□□ -0.02
CMTM4-201ENST00000330687 KHDC1LQ5JSQ8 128 aa14.92□□□□□ -0.02
CMTM4-201ENST00000330687 OXTP01178 125 aa14.92□□□□□ -0.02
CMTM4-201ENST00000330687 SERP2Q8N6R1 65 aa14.92□□□□□ -0.02
CMTM4-201ENST00000330687 FAM208BQ5VWN6 2430 aa14.92□□□□□ -0.02
CMTM4-201ENST00000330687 CXCL5P42830 114 aa14.91□□□□□ -0.02
CMTM4-201ENST00000330687 C19orf54Q5BKX5 351 aa14.91□□□□□ -0.02
CMTM4-201ENST00000330687 TRAV25A0A0B4J276 109 aa14.91□□□□□ -0.02
CMTM4-201ENST00000330687 MIR7-3HGQ8N6C7 128 aa14.9□□□□□ -0.02
CMTM4-201ENST00000330687 USMG5Q96IX5 58 aa14.9□□□□□ -0.02
CMTM4-201ENST00000330687 FN1P02751 2386 aaKnown RBP14.89□□□□□ -0.03
CMTM4-201ENST00000330687 RBMY1A1P0DJD3 496 aaKnown RBP14.89□□□□□ -0.03
CMTM4-201ENST00000330687 RBMY1CP0DJD4 496 aa14.89□□□□□ -0.03
CMTM4-201ENST00000330687 RBMY1FQ15415 496 aaKnown RBP14.89□□□□□ -0.03
CMTM4-201ENST00000330687 C20orf197Q8N268 126 aa14.89□□□□□ -0.03
CMTM4-201ENST00000330687 DEFB131AP59861 70 aa14.89□□□□□ -0.03
CMTM4-201ENST00000330687 HIST2H2BCQ6DN03 193 aa14.89□□□□□ -0.03
CMTM4-201ENST00000330687 HIST2H2BDQ6DRA6 164 aa14.89□□□□□ -0.03
CMTM4-201ENST00000330687 RPL36AP83881 106 aaKnown RBP14.89□□□□□ -0.03
CMTM4-201ENST00000330687 RPL36ALQ969Q0 106 aaKnown RBP14.89□□□□□ -0.03
CMTM4-201ENST00000330687 PIMREGQ9BSJ6 248 aa14.89□□□□□ -0.03
CMTM4-201ENST00000330687 PAX4O43316 350 aa14.88□□□□□ -0.03
CMTM4-201ENST00000330687 IGHV4-38-2P0DP08 117 aa14.88□□□□□ -0.03
CMTM4-201ENST00000330687 SND1-IT1Q9HBX3 110 aa14.88□□□□□ -0.03
CMTM4-201ENST00000330687 LINC00242Q5T6M2 205 aa14.88□□□□□ -0.03
CMTM4-201ENST00000330687 TMEM258P61165 79 aa14.87□□□□□ -0.03
CMTM4-201ENST00000330687 C22orf24Q9Y442 160 aa14.87□□□□□ -0.03
CMTM4-201ENST00000330687 A0A1W2PPR1 153 aa14.86□□□□□ -0.03
CMTM4-201ENST00000330687 TIMM17BO60830 172 aa14.86□□□□□ -0.03
CMTM4-201ENST00000330687 GHRHP01286 108 aa14.86□□□□□ -0.03
CMTM4-201ENST00000330687 LINC00337Q8N6G1 96 aa14.85□□□□□ -0.03
CMTM4-201ENST00000330687 COPS9Q8WXC6 57 aa14.85□□□□□ -0.03
CMTM4-201ENST00000330687 POLQO75417 2590 aa14.85□□□□□ -0.03
CMTM4-201ENST00000330687 LINC01561Q8N1V8 128 aa14.85□□□□□ -0.03
CMTM4-201ENST00000330687 SMIM1B2RUZ4 78 aa14.84□□□□□ -0.03
CMTM4-201ENST00000330687 SMIM11BQ8TCY0 68 aa14.84□□□□□ -0.03
CMTM4-201ENST00000330687 BEAN1Q3B7T3 259 aa14.84□□□□□ -0.03
CMTM4-201ENST00000330687 TMEM243Q9BU79 118 aa14.83□□□□□ -0.03
CMTM4-201ENST00000330687 FHL2Q14192 279 aa14.83□□□□□ -0.04
CMTM4-201ENST00000330687 PRB1P04280 392 aa14.82□□□□□ -0.04
CMTM4-201ENST00000330687 C1orf43Q9BWL3 253 aa14.82□□□□□ -0.04
CMTM4-201ENST00000330687 ACACBO00763 2458 aa14.82□□□□□ -0.04
CMTM4-201ENST00000330687 FAM19A1Q7Z5A9 133 aa14.82□□□□□ -0.04
CMTM4-201ENST00000330687 UBE2E2Q96LR5 201 aa14.82□□□□□ -0.04
CMTM4-201ENST00000330687 PIEZO1Q92508 2521 aa14.82□□□□□ -0.04
CMTM4-201ENST00000330687 TRAV13-2A0A0B4J235 113 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms