RNA–Protein interactions for RNA: ENST00000328495.9

CCDC144A-201, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2

Gene CCDC144A, Length 3,375 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-201ENST00000328495 TMEM254Q8TBM7 123 aa0.4□□□□□ -2.34
CCDC144A-201ENST00000328495 TOMM6Q96B49 74 aa0.4□□□□□ -2.34
CCDC144A-201ENST00000328495 FAM167A-AS1Q96KT0 104 aa0.4□□□□□ -2.34
CCDC144A-201ENST00000328495 BCL2L10Q9HD36 194 aa0.4□□□□□ -2.34
CCDC144A-201ENST00000328495 TMEM138Q9NPI0 162 aa0.4□□□□□ -2.34
CCDC144A-201ENST00000328495 OSTCQ9NRP0 149 aa0.4□□□□□ -2.34
CCDC144A-201ENST00000328495 TP73-AS1Q9UF72 201 aa0.4□□□□□ -2.34
CCDC144A-201ENST00000328495 JPT1Q9UK76 154 aa0.4□□□□□ -2.34
CCDC144A-201ENST00000328495 U3KQA8 63 aa0.4□□□□□ -2.34
CCDC144A-201ENST00000328495 ZNF705FA8MVS1 300 aaPredicted RBP0.4□□□□□ -2.35
CCDC144A-201ENST00000328495 LEPROTO15243 131 aa0.4□□□□□ -2.35
CCDC144A-201ENST00000328495 GYPAP02724 150 aa0.4□□□□□ -2.35
CCDC144A-201ENST00000328495 LYNX1P0DP58 116 aa0.4□□□□□ -2.35
CCDC144A-201ENST00000328495 VBP1P61758 197 aa0.4□□□□□ -2.35
CCDC144A-201ENST00000328495 RPL19P84098 196 aaKnown RBP0.4□□□□□ -2.35
CCDC144A-201ENST00000328495 RHEBQ15382 184 aa0.4□□□□□ -2.35
CCDC144A-201ENST00000328495 SURF2Q15527 256 aaPredicted RBP0.4□□□□□ -2.35
CCDC144A-201ENST00000328495 LTC4SQ16873 150 aa0.4□□□□□ -2.35
CCDC144A-201ENST00000328495 PYY3Q5JQD4 70 aa0.4□□□□□ -2.35
CCDC144A-201ENST00000328495 MMGT1Q8N4V1 131 aa0.4□□□□□ -2.35
CCDC144A-201ENST00000328495 OR52R1Q8NGF1 315 aa0.4□□□□□ -2.35
CCDC144A-201ENST00000328495 OR2T4Q8NH00 348 aa0.4□□□□□ -2.35
CCDC144A-201ENST00000328495 PP6455Q8WZ26 134 aa0.4□□□□□ -2.35
CCDC144A-201ENST00000328495 RNASE6Q93091 150 aaKnown RBP0.4□□□□□ -2.35
CCDC144A-201ENST00000328495 SEC11CQ9BY50 192 aa0.4□□□□□ -2.35
CCDC144A-201ENST00000328495 GID8Q9NWU2 228 aa0.4□□□□□ -2.35
CCDC144A-201ENST00000328495 TAS2R8Q9NYW2 309 aa0.4□□□□□ -2.35
CCDC144A-201ENST00000328495 BAZ2BQ9UIF8 2168 aaKnown RBP0.4□□□□□ -2.35
CCDC144A-201ENST00000328495 LOC107984640A0A0U1RRK4 108 aa0.4□□□□□ -2.35
CCDC144A-201ENST00000328495 PNMA8CA0A1B0GUJ8 204 aa0.4□□□□□ -2.35
CCDC144A-201ENST00000328495 FAM25AB3EWG3 89 aa0.4□□□□□ -2.35
CCDC144A-201ENST00000328495 FAM25CB3EWG5 89 aa0.4□□□□□ -2.35
CCDC144A-201ENST00000328495 FAM25GB3EWG6 89 aa0.4□□□□□ -2.35
CCDC144A-201ENST00000328495 ZNF737O75373 536 aa0.4□□□□□ -2.35
CCDC144A-201ENST00000328495 PGLYRP1O75594 196 aaPredicted RBP0.4□□□□□ -2.35
CCDC144A-201ENST00000328495 UBL3O95164 117 aa0.4□□□□□ -2.35
CCDC144A-201ENST00000328495 IGKV1-5P01602 117 aa0.4□□□□□ -2.35
CCDC144A-201ENST00000328495 APOA2P02652 100 aa0.4□□□□□ -2.35
CCDC144A-201ENST00000328495 IL5P05113 134 aa0.4□□□□□ -2.35
CCDC144A-201ENST00000328495 SAA1P0DJI8 122 aaPredicted RBP0.4□□□□□ -2.35
CCDC144A-201ENST00000328495 SRP14P37108 136 aaKnown RBP0.4□□□□□ -2.35
CCDC144A-201ENST00000328495 RPL28P46779 137 aaKnown RBP0.4□□□□□ -2.35
CCDC144A-201ENST00000328495 DAPP51397 102 aa0.4□□□□□ -2.35
CCDC144A-201ENST00000328495 MESTQ5EB52 335 aa0.4□□□□□ -2.35
CCDC144A-201ENST00000328495 GDF5OSQ5U4N7 250 aa0.4□□□□□ -2.35
CCDC144A-201ENST00000328495 CFAP126Q5VTH2 177 aa0.4□□□□□ -2.35
CCDC144A-201ENST00000328495 ATP5EP2Q5VTU8 51 aa0.4□□□□□ -2.35
CCDC144A-201ENST00000328495 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.4□□□□□ -2.35
CCDC144A-201ENST00000328495 BPIFA4PQ86YQ2 179 aa0.4□□□□□ -2.35
CCDC144A-201ENST00000328495 Q8IYB0 196 aa0.4□□□□□ -2.35
CCDC144A-201ENST00000328495 SMIM20Q8N5G0 67 aa0.4□□□□□ -2.35
CCDC144A-201ENST00000328495 PXT1Q8NFP0 134 aa0.4□□□□□ -2.35
CCDC144A-201ENST00000328495 OR52L1Q8NGH7 329 aa0.4□□□□□ -2.35
CCDC144A-201ENST00000328495 OR5A2Q8NGI9 324 aa0.4□□□□□ -2.35
CCDC144A-201ENST00000328495 PFN4Q8NHR9 129 aa0.4□□□□□ -2.35
CCDC144A-201ENST00000328495 ODF3Q96PU9 254 aa0.4□□□□□ -2.35
CCDC144A-201ENST00000328495 GPX7Q96SL4 187 aaPredicted RBP0.4□□□□□ -2.35
CCDC144A-201ENST00000328495 PHB2Q99623 299 aa0.4□□□□□ -2.35
CCDC144A-201ENST00000328495 C14orf132Q9NPU4 83 aa0.4□□□□□ -2.35
CCDC144A-201ENST00000328495 IL36BQ9NZH7 164 aa0.4□□□□□ -2.35
CCDC144A-201ENST00000328495 ARL2BPQ9Y2Y0 163 aa0.4□□□□□ -2.35
CCDC144A-201ENST00000328495 TMEM56-RWDD3S4R434 201 aa0.4□□□□□ -2.35
CCDC144A-201ENST00000328495 CITO14578 2027 aa0.39□□□□□ -2.35
CCDC144A-201ENST00000328495 KIAA2026Q5HYC2 2103 aa0.39□□□□□ -2.35
CCDC144A-201ENST00000328495 TGIF2-C20orf24A0A0A6YYL0 155 aa0.39□□□□□ -2.35
CCDC144A-201ENST00000328495 H3BMG7 143 aa0.39□□□□□ -2.35
CCDC144A-201ENST00000328495 NDUFC1O43677 76 aa0.39□□□□□ -2.35
CCDC144A-201ENST00000328495 TFF1P04155 84 aa0.39□□□□□ -2.35
CCDC144A-201ENST00000328495 ACYP1P07311 99 aa0.39□□□□□ -2.35
CCDC144A-201ENST00000328495 COX4I1P13073 169 aa0.39□□□□□ -2.35
CCDC144A-201ENST00000328495 PPP1R2P41236 205 aa0.39□□□□□ -2.35
CCDC144A-201ENST00000328495 EFNA4P52798 201 aa0.39□□□□□ -2.35
CCDC144A-201ENST00000328495 RPL37AP61513 92 aaKnown RBP0.39□□□□□ -2.35
CCDC144A-201ENST00000328495 RNASE10Q5GAN6 216 aaKnown RBP0.39□□□□□ -2.35
CCDC144A-201ENST00000328495 FAM27BQ5VT28 67 aa0.39□□□□□ -2.35
CCDC144A-201ENST00000328495 GPHB5Q86YW7 130 aa0.39□□□□□ -2.35
CCDC144A-201ENST00000328495 STX19Q8N4C7 294 aa0.39□□□□□ -2.35
CCDC144A-201ENST00000328495 PPP1R1CQ8WVI7 109 aa0.39□□□□□ -2.35
CCDC144A-201ENST00000328495 TRGV9Q99603 122 aa0.39□□□□□ -2.35
CCDC144A-201ENST00000328495 SLC50A1Q9BRV3 221 aa0.39□□□□□ -2.35
CCDC144A-201ENST00000328495 CNFNQ9BYD5 112 aa0.39□□□□□ -2.35
CCDC144A-201ENST00000328495 TCEAL2Q9H3H9 227 aaPredicted RBP0.39□□□□□ -2.35
CCDC144A-201ENST00000328495 CMC2Q9NRP2 79 aa0.39□□□□□ -2.35
CCDC144A-201ENST00000328495 CISHQ9NSE2 258 aa0.39□□□□□ -2.35
CCDC144A-201ENST00000328495 RNF11Q9Y3C5 154 aa0.39□□□□□ -2.35
CCDC144A-201ENST00000328495 WNK2Q9Y3S1 2297 aa0.39□□□□□ -2.35
CCDC144A-201ENST00000328495 TRBV7-1A0A0A6YYK4 115 aa0.39□□□□□ -2.35
CCDC144A-201ENST00000328495 CCDC179H3BU77 68 aa0.39□□□□□ -2.35
CCDC144A-201ENST00000328495 LYRM1O43325 122 aa0.39□□□□□ -2.35
CCDC144A-201ENST00000328495 TIMM17BO60830 172 aa0.39□□□□□ -2.35
CCDC144A-201ENST00000328495 CYB5AP00167 134 aa0.39□□□□□ -2.35
CCDC144A-201ENST00000328495 RNASE4P34096 147 aaKnown RBP0.39□□□□□ -2.35
CCDC144A-201ENST00000328495 GLRXP35754 106 aa0.39□□□□□ -2.35
CCDC144A-201ENST00000328495 ZNF137PP52743 207 aa0.39□□□□□ -2.35
CCDC144A-201ENST00000328495 NCALDP61601 193 aa0.39□□□□□ -2.35
CCDC144A-201ENST00000328495 ESRGQ1W209 222 aa0.39□□□□□ -2.35
CCDC144A-201ENST00000328495 GKN2Q86XP6 184 aa0.39□□□□□ -2.35
CCDC144A-201ENST00000328495 LINC00311Q8N616 119 aa0.39□□□□□ -2.35
CCDC144A-201ENST00000328495 LINC00301Q8NCQ3 95 aa0.39□□□□□ -2.35
CCDC144A-201ENST00000328495 S100ZQ8WXG8 99 aa0.39□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms