RNA–Protein interactions for RNA: ENST00000318438.6

SYCN-201, Transcript of syncollin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCN, Length 573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCN-201ENST00000318438 TSHBP01222 138 aa8.4□□□□□ -1.06
SYCN-201ENST00000318438 ZNF25P17030 456 aaPredicted RBP8.4□□□□□ -1.06
SYCN-201ENST00000318438 FAM104BQ5XKR9 115 aa8.4□□□□□ -1.06
SYCN-201ENST00000318438 FGF6P10767 208 aa8.39□□□□□ -1.07
SYCN-201ENST00000318438 ESDP10768 282 aa8.39□□□□□ -1.07
SYCN-201ENST00000318438 CAMPP49913 170 aa8.39□□□□□ -1.07
SYCN-201ENST00000318438 PNRC1Q12796 327 aaPredicted RBP8.39□□□□□ -1.07
SYCN-201ENST00000318438 NRACQ8N912 160 aa8.39□□□□□ -1.07
SYCN-201ENST00000318438 TMEM242Q9NWH2 141 aa8.39□□□□□ -1.07
SYCN-201ENST00000318438 A0A1B0GXF2 115 aa8.38□□□□□ -1.07
SYCN-201ENST00000318438 LINC00862A6NCI5 91 aa8.38□□□□□ -1.07
SYCN-201ENST00000318438 SMKR1H3BMG3 65 aa8.38□□□□□ -1.07
SYCN-201ENST00000318438 PPP1R2P9O14990 202 aa8.38□□□□□ -1.07
SYCN-201ENST00000318438 S100A8P05109 93 aa8.38□□□□□ -1.07
SYCN-201ENST00000318438 PRSS1P07477 247 aa8.38□□□□□ -1.07
SYCN-201ENST00000318438 SUMO2P61956 95 aaKnown RBP8.38□□□□□ -1.07
SYCN-201ENST00000318438 HBBP68871 147 aa8.38□□□□□ -1.07
SYCN-201ENST00000318438 MRPL51Q4U2R6 128 aaKnown RBP8.38□□□□□ -1.07
SYCN-201ENST00000318438 RNASEKQ6P5S7 137 aaKnown RBP8.38□□□□□ -1.07
SYCN-201ENST00000318438 CLRN3Q8NCR9 226 aa8.38□□□□□ -1.07
SYCN-201ENST00000318438 C7orf77A4D0Y5 90 aa8.37□□□□□ -1.07
SYCN-201ENST00000318438 F8W036 122 aa8.37□□□□□ -1.07
SYCN-201ENST00000318438 VCYO14598 125 aa8.37□□□□□ -1.07
SYCN-201ENST00000318438 DGAT2L7PQ6IED9 249 aa8.37□□□□□ -1.07
SYCN-201ENST00000318438 MRPL54Q6P161 138 aaKnown RBP8.37□□□□□ -1.07
SYCN-201ENST00000318438 COMMD7Q86VX2 200 aa8.37□□□□□ -1.07
SYCN-201ENST00000318438 BTF3L4Q96K17 158 aa8.37□□□□□ -1.07
SYCN-201ENST00000318438 LCE2AQ5TA79 106 aaPredicted RBP8.36□□□□□ -1.07
SYCN-201ENST00000318438 ATP5L2Q7Z4Y8 100 aa8.36□□□□□ -1.07
SYCN-201ENST00000318438 MRPL52Q86TS9 123 aaKnown RBP8.36□□□□□ -1.07
SYCN-201ENST00000318438 TMEM101Q96IK0 257 aa8.36□□□□□ -1.07
SYCN-201ENST00000318438 KIR2DL4Q99706 377 aa8.36□□□□□ -1.07
SYCN-201ENST00000318438 TRBV24-1A0A075B6N3 115 aa8.35□□□□□ -1.07
SYCN-201ENST00000318438 IGKV3OR2-268A0A0C4DH90 116 aa8.35□□□□□ -1.07
SYCN-201ENST00000318438 A0A0J9YXV3 536 aa8.35□□□□□ -1.07
SYCN-201ENST00000318438 A0A0U1RQV1 116 aa8.35□□□□□ -1.07
SYCN-201ENST00000318438 FCER1GP30273 86 aa8.35□□□□□ -1.07
SYCN-201ENST00000318438 CKS2P33552 79 aa8.35□□□□□ -1.07
SYCN-201ENST00000318438 KRTAP10-8P60410 259 aa8.35□□□□□ -1.07
SYCN-201ENST00000318438 C9orf163Q8N9P6 203 aa8.35□□□□□ -1.07
SYCN-201ENST00000318438 OR5A1Q8NGJ0 315 aa8.35□□□□□ -1.07
SYCN-201ENST00000318438 ANAPC16Q96DE5 110 aa8.35□□□□□ -1.07
SYCN-201ENST00000318438 C20orf78Q9BR46 151 aa8.35□□□□□ -1.07
SYCN-201ENST00000318438 hDV102S1A0JD36 115 aa8.34□□□□□ -1.07
SYCN-201ENST00000318438 GAGE12HA6NDE8 117 aa8.34□□□□□ -1.07
SYCN-201ENST00000318438 CNBPP62633 177 aaKnown RBP8.34□□□□□ -1.07
SYCN-201ENST00000318438 RPL32P62910 135 aaKnown RBP8.34□□□□□ -1.07
SYCN-201ENST00000318438 CHCHD10Q8WYQ3 142 aaPredicted RBP8.34□□□□□ -1.07
SYCN-201ENST00000318438 PHOX2AO14813 284 aa8.33□□□□□ -1.08
SYCN-201ENST00000318438 TNFRSF6BO95407 300 aa8.33□□□□□ -1.08
SYCN-201ENST00000318438 PPBPP02775 128 aa8.33□□□□□ -1.08
SYCN-201ENST00000318438 MT-ND4LP03901 98 aa8.33□□□□□ -1.08
SYCN-201ENST00000318438 SMAGPQ0VAQ4 97 aa8.33□□□□□ -1.08
SYCN-201ENST00000318438 UQCC3Q6UW78 93 aa8.33□□□□□ -1.08
SYCN-201ENST00000318438 CDC42SE2Q9NRR3 84 aa8.33□□□□□ -1.08
SYCN-201ENST00000318438 FSIP2Q5CZC0 6907 aa8.32□□□□□ -1.08
SYCN-201ENST00000318438 D6R8Y8 96 aa8.32□□□□□ -1.08
SYCN-201ENST00000318438 TCAPO15273 167 aa8.32□□□□□ -1.08
SYCN-201ENST00000318438 CFAP161Q6P656 301 aa8.32□□□□□ -1.08
SYCN-201ENST00000318438 SDIM1Q6ZPB5 146 aa8.32□□□□□ -1.08
SYCN-201ENST00000318438 ZNF664Q8N3J9 261 aa8.32□□□□□ -1.08
SYCN-201ENST00000318438 C15orf56Q8N910 161 aa8.32□□□□□ -1.08
SYCN-201ENST00000318438 SMIM2Q9BVW6 85 aa8.32□□□□□ -1.08
SYCN-201ENST00000318438 CSDC2Q9Y534 153 aaKnown RBP8.32□□□□□ -1.08
SYCN-201ENST00000318438 LINC00959A0A1B0GUT2 108 aa8.31□□□□□ -1.08
SYCN-201ENST00000318438 ORMDL3Q8N138 153 aa8.31□□□□□ -1.08
SYCN-201ENST00000318438 TMEM18Q96B42 140 aa8.31□□□□□ -1.08
SYCN-201ENST00000318438 AP5S1Q9NUS5 200 aa8.31□□□□□ -1.08
SYCN-201ENST00000318438 UBE2D4Q9Y2X8 147 aa8.31□□□□□ -1.08
SYCN-201ENST00000318438 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.3□□□□□ -1.08
SYCN-201ENST00000318438 NPYP01303 97 aa8.3□□□□□ -1.08
SYCN-201ENST00000318438 XCL1P47992 114 aa8.3□□□□□ -1.08
SYCN-201ENST00000318438 FOXI1Q12951 378 aa8.3□□□□□ -1.08
SYCN-201ENST00000318438 GVQW2A0A096LPI5 108 aaPredicted RBP8.29□□□□□ -1.08
SYCN-201ENST00000318438 CCL25O15444 150 aa8.29□□□□□ -1.08
SYCN-201ENST00000318438 ADCYAP1P18509 176 aa8.29□□□□□ -1.08
SYCN-201ENST00000318438 SS18Q15532 418 aa8.29□□□□□ -1.08
SYCN-201ENST00000318438 TIMM21Q9BVV7 248 aa8.29□□□□□ -1.08
SYCN-201ENST00000318438 TMEM218A2RU14 115 aa8.28□□□□□ -1.08
SYCN-201ENST00000318438 SLPIP03973 132 aa8.28□□□□□ -1.08
SYCN-201ENST00000318438 CIRBPQ14011 172 aaKnown RBP8.28□□□□□ -1.08
SYCN-201ENST00000318438 CD164L2Q6UWJ8 174 aa8.28□□□□□ -1.08
SYCN-201ENST00000318438 TMEM136Q6ZRR5 245 aa8.28□□□□□ -1.08
SYCN-201ENST00000318438 PRELID3AQ96N28 172 aa8.28□□□□□ -1.08
SYCN-201ENST00000318438 LAMTOR2Q9Y2Q5 125 aa8.28□□□□□ -1.08
SYCN-201ENST00000318438 IGHV3-64A0A075B6Q5 118 aa8.27□□□□□ -1.09
SYCN-201ENST00000318438 HIGD2BQ4VC39 106 aa8.27□□□□□ -1.09
SYCN-201ENST00000318438 Q6ZUT4 128 aa8.27□□□□□ -1.09
SYCN-201ENST00000318438 IMMP2LQ96T52 175 aa8.27□□□□□ -1.09
SYCN-201ENST00000318438 A0A087WYN8 130 aa8.26□□□□□ -1.09
SYCN-201ENST00000318438 C1orf196B1AJZ1 125 aa8.26□□□□□ -1.09
SYCN-201ENST00000318438 DPH3Q96FX2 82 aa8.26□□□□□ -1.09
SYCN-201ENST00000318438 SEC11CQ9BY50 192 aa8.26□□□□□ -1.09
SYCN-201ENST00000318438 CTDSP1Q9GZU7 261 aa8.26□□□□□ -1.09
SYCN-201ENST00000318438 SPANXA1Q9NS26 97 aa8.26□□□□□ -1.09
SYCN-201ENST00000318438 IGHV1-58A0A0C4DH39 117 aa8.25□□□□□ -1.09
SYCN-201ENST00000318438 PRSS47A8MTI9 375 aa8.25□□□□□ -1.09
SYCN-201ENST00000318438 CHTF8P0CG12 524 aa8.25□□□□□ -1.09
SYCN-201ENST00000318438 RPL39P62891 51 aaKnown RBP8.25□□□□□ -1.09
SYCN-201ENST00000318438 RNASE13Q5GAN3 156 aaKnown RBP8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms