RNA–Protein interactions for RNA: ENST00000317243.9

ZNF554-201, Transcript of zinc finger protein 554, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF554, Length 2,736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF554-201ENST00000317243 KNCNA6PVL3 124 aa14.2□□□□□ -0.14
ZNF554-201ENST00000317243 KRTAP1-3Q8IUG1 177 aa14.2□□□□□ -0.14
ZNF554-201ENST00000317243 IGHV3-73A0A0B4J1V6 119 aa14.19□□□□□ -0.14
ZNF554-201ENST00000317243 K7EQG2 157 aa14.19□□□□□ -0.14
ZNF554-201ENST00000317243 IGHV3-30-3P0DP02 117 aa14.19□□□□□ -0.14
ZNF554-201ENST00000317243 LITAFQ99732 161 aa14.19□□□□□ -0.14
ZNF554-201ENST00000317243 SPANXA1Q9NS26 97 aa14.19□□□□□ -0.14
ZNF554-201ENST00000317243 TRAV8-3A0A0A6YYJ7 113 aa14.19□□□□□ -0.14
ZNF554-201ENST00000317243 TRBV6-5A0A0K0K1A5 114 aa14.18□□□□□ -0.14
ZNF554-201ENST00000317243 H3BT86 120 aa14.18□□□□□ -0.14
ZNF554-201ENST00000317243 J3QLI3 93 aa14.18□□□□□ -0.14
ZNF554-201ENST00000317243 WFDC11Q8NEX6 87 aa14.18□□□□□ -0.14
ZNF554-201ENST00000317243 TRGV11A0A075B6L2 103 aa14.18□□□□□ -0.14
ZNF554-201ENST00000317243 FAM236AA0A1B0GUQ0 79 aa14.18□□□□□ -0.14
ZNF554-201ENST00000317243 FAM236BA0A1B0GV22 79 aa14.18□□□□□ -0.14
ZNF554-201ENST00000317243 COX6CP09669 75 aa14.18□□□□□ -0.14
ZNF554-201ENST00000317243 RBMY1A1P0DJD3 496 aaKnown RBP14.18□□□□□ -0.14
ZNF554-201ENST00000317243 RBMY1CP0DJD4 496 aa14.18□□□□□ -0.14
ZNF554-201ENST00000317243 RBMY1FQ15415 496 aaKnown RBP14.18□□□□□ -0.14
ZNF554-201ENST00000317243 MRPL23Q16540 153 aaKnown RBP14.18□□□□□ -0.14
ZNF554-201ENST00000317243 RNASE13Q5GAN3 156 aaKnown RBP14.18□□□□□ -0.14
ZNF554-201ENST00000317243 CEMP1Q6PRD7 247 aaPredicted RBP14.17□□□□□ -0.14
ZNF554-201ENST00000317243 C20orf203Q8NBC4 194 aa14.17□□□□□ -0.14
ZNF554-201ENST00000317243 ANK3Q12955 4377 aaKnown RBP14.16□□□□□ -0.14
ZNF554-201ENST00000317243 NSUN5P1Q3KNT7 163 aa14.16□□□□□ -0.14
ZNF554-201ENST00000317243 C9orf85Q96MD7 179 aa14.16□□□□□ -0.14
ZNF554-201ENST00000317243 NACAE9PAV3 2078 aa14.16□□□□□ -0.14
ZNF554-201ENST00000317243 TMEM126AQ9H061 195 aa14.16□□□□□ -0.14
ZNF554-201ENST00000317243 TRBV7-7A0A0K0K1E9 115 aa14.15□□□□□ -0.14
ZNF554-201ENST00000317243 A8MZ25 164 aa14.15□□□□□ -0.14
ZNF554-201ENST00000317243 IGLV4-3A0A075B6K6 122 aa14.15□□□□□ -0.14
ZNF554-201ENST00000317243 FAM240AA0A1B0GVK7 77 aa14.15□□□□□ -0.14
ZNF554-201ENST00000317243 I3L3M4 83 aa14.15□□□□□ -0.14
ZNF554-201ENST00000317243 SNRPD3P62318 126 aaKnown RBP14.15□□□□□ -0.14
ZNF554-201ENST00000317243 TIMM21Q9BVV7 248 aa14.15□□□□□ -0.14
ZNF554-201ENST00000317243 RHOHQ15669 191 aa14.14□□□□□ -0.15
ZNF554-201ENST00000317243 LST1O00453 97 aa14.14□□□□□ -0.15
ZNF554-201ENST00000317243 TMEM101Q96IK0 257 aa14.14□□□□□ -0.15
ZNF554-201ENST00000317243 IGHV1OR15-1A0A075B7D0 117 aa14.14□□□□□ -0.15
ZNF554-201ENST00000317243 UBE2E2Q96LR5 201 aa14.14□□□□□ -0.15
ZNF554-201ENST00000317243 YAE1D1Q9NRH1 226 aa14.14□□□□□ -0.15
ZNF554-201ENST00000317243 FASNP49327 2511 aaKnown RBP14.13□□□□□ -0.15
ZNF554-201ENST00000317243 LINC00694P0DN24 101 aa14.13□□□□□ -0.15
ZNF554-201ENST00000317243 DEFB131AP59861 70 aa14.13□□□□□ -0.15
ZNF554-201ENST00000317243 NOTCH2Q04721 2471 aa14.12□□□□□ -0.15
ZNF554-201ENST00000317243 CD28P10747 220 aa14.12□□□□□ -0.15
ZNF554-201ENST00000317243 PROK1P58294 105 aa14.12□□□□□ -0.15
ZNF554-201ENST00000317243 A0A1W2PRX2 142 aa14.12□□□□□ -0.15
ZNF554-201ENST00000317243 DEFB121Q5J5C9 76 aa14.12□□□□□ -0.15
ZNF554-201ENST00000317243 NDUFA12Q9UI09 145 aa14.12□□□□□ -0.15
ZNF554-201ENST00000317243 HECTD1Q9ULT8 2610 aa14.12□□□□□ -0.15
ZNF554-201ENST00000317243 DAND5Q8N907 189 aa14.11□□□□□ -0.15
ZNF554-201ENST00000317243 Q9UF83 564 aa14.11□□□□□ -0.15
ZNF554-201ENST00000317243 UNC79Q9P2D8 2635 aa14.11□□□□□ -0.15
ZNF554-201ENST00000317243 RBMY1BA6NDE4 496 aaKnown RBP14.11□□□□□ -0.15
ZNF554-201ENST00000317243 RBMY1EA6NEQ0 496 aaKnown RBP14.11□□□□□ -0.15
ZNF554-201ENST00000317243 RBMY1DP0C7P1 496 aaKnown RBP14.11□□□□□ -0.15
ZNF554-201ENST00000317243 TMEM61Q8N0U2 210 aa14.11□□□□□ -0.15
ZNF554-201ENST00000317243 C2CD3Q4AC94 2353 aa14.1□□□□□ -0.15
ZNF554-201ENST00000317243 C9orf153Q5TBE3 101 aa14.09□□□□□ -0.15
ZNF554-201ENST00000317243 MIAQ16674 131 aa14.09□□□□□ -0.15
ZNF554-201ENST00000317243 LOC107984640A0A0U1RRK4 108 aa14.08□□□□□ -0.15
ZNF554-201ENST00000317243 SMCR5Q8TEV8 140 aa14.08□□□□□ -0.15
ZNF554-201ENST00000317243 GCN1Q92616 2671 aaKnown RBP14.08□□□□□ -0.15
ZNF554-201ENST00000317243 TMEM89A2RUT3 159 aa14.07□□□□□ -0.16
ZNF554-201ENST00000317243 SPANXDQ9BXN6 97 aa14.07□□□□□ -0.16
ZNF554-201ENST00000317243 SPANXCQ9NY87 97 aa14.07□□□□□ -0.16
ZNF554-201ENST00000317243 KLK5Q9Y337 293 aaPredicted RBP14.07□□□□□ -0.16
ZNF554-201ENST00000317243 IGHV1-58A0A0C4DH39 117 aa14.06□□□□□ -0.16
ZNF554-201ENST00000317243 ESM1Q9NQ30 184 aa14.06□□□□□ -0.16
ZNF554-201ENST00000317243 FAM104AQ969W3 186 aa14.06□□□□□ -0.16
ZNF554-201ENST00000317243 C3orf22Q8N5N4 141 aa14.05□□□□□ -0.16
ZNF554-201ENST00000317243 NDUFA7O95182 113 aa14.04□□□□□ -0.16
ZNF554-201ENST00000317243 RNF152Q8N8N0 203 aa14.04□□□□□ -0.16
ZNF554-201ENST00000317243 VWFP04275 2813 aa14.04□□□□□ -0.16
ZNF554-201ENST00000317243 MRPS36P82909 103 aaKnown RBP14.04□□□□□ -0.16
ZNF554-201ENST00000317243 VSIG2Q96IQ7 327 aa14.03□□□□□ -0.16
ZNF554-201ENST00000317243 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.02□□□□□ -0.16
ZNF554-201ENST00000317243 IGKV2-29A2NJV5 120 aaPredicted RBP14.02□□□□□ -0.16
ZNF554-201ENST00000317243 HERVK_113P63121 156 aa14.02□□□□□ -0.16
ZNF554-201ENST00000317243 DNAJC9-AS1A6NH13 148 aa14.02□□□□□ -0.17
ZNF554-201ENST00000317243 DNAJC30Q96LL9 226 aa14.02□□□□□ -0.17
ZNF554-201ENST00000317243 IMUPQ9GZP8 106 aa14.02□□□□□ -0.17
ZNF554-201ENST00000317243 CSDC2Q9Y534 153 aaKnown RBP14.02□□□□□ -0.17
ZNF554-201ENST00000317243 IGHV3-38A0A0C4DH36 116 aa14.01□□□□□ -0.17
ZNF554-201ENST00000317243 CITED2Q99967 270 aaPredicted RBP14.01□□□□□ -0.17
ZNF554-201ENST00000317243 OTOGQ6ZRI0 2925 aa14.01□□□□□ -0.17
ZNF554-201ENST00000317243 Q8N2B8 174 aa14□□□□□ -0.17
ZNF554-201ENST00000317243 Q6ZSN1 163 aa14□□□□□ -0.17
ZNF554-201ENST00000317243 A0A0U1RRA0 63 aa13.99□□□□□ -0.17
ZNF554-201ENST00000317243 ACYP1P07311 99 aa13.99□□□□□ -0.17
ZNF554-201ENST00000317243 UQCRQO14949 82 aa13.99□□□□□ -0.17
ZNF554-201ENST00000317243 MAP6D1Q9H9H5 199 aa13.99□□□□□ -0.17
ZNF554-201ENST00000317243 NBEAL2Q6ZNJ1 2754 aa13.99□□□□□ -0.17
ZNF554-201ENST00000317243 LINC00643Q86TS7 51 aa13.99□□□□□ -0.17
ZNF554-201ENST00000317243 PYGO1Q9Y3Y4 419 aa13.99□□□□□ -0.17
ZNF554-201ENST00000317243 LRRC75A-AS1Q8N1F1 130 aa13.98□□□□□ -0.17
ZNF554-201ENST00000317243 DYNLRB2Q8TF09 96 aa13.98□□□□□ -0.17
ZNF554-201ENST00000317243 C4orf3Q8WVX3 66 aa13.98□□□□□ -0.17
ZNF554-201ENST00000317243 DAZ2Q13117 558 aaKnown RBP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 106.2 ms