RNA–Protein interactions for RNA: ENST00000316948.8

CACFD1-202, Transcript of calcium channel flower domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CACFD1, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACFD1-202ENST00000316948 ZNF462Q96JM2 2506 aa11.87□□□□□ -0.51
CACFD1-202ENST00000316948 DEFB121Q5J5C9 76 aa11.86□□□□□ -0.51
CACFD1-202ENST00000316948 TEX15Q9BXT5 2789 aa11.86□□□□□ -0.51
CACFD1-202ENST00000316948 NF1P21359 2839 aa11.86□□□□□ -0.51
CACFD1-202ENST00000316948 TMEM101Q96IK0 257 aa11.86□□□□□ -0.51
CACFD1-202ENST00000316948 ZNF469Q96JG9 3925 aaPredicted RBP11.86□□□□□ -0.51
CACFD1-202ENST00000316948 NRGNQ92686 78 aa11.85□□□□□ -0.51
CACFD1-202ENST00000316948 TRBV7-7A0A0K0K1E9 115 aa11.84□□□□□ -0.51
CACFD1-202ENST00000316948 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.84□□□□□ -0.51
CACFD1-202ENST00000316948 SPANXA1Q9NS26 97 aa11.84□□□□□ -0.51
CACFD1-202ENST00000316948 NIPBLQ6KC79 2804 aaeCLIP11.84□□□□□ -0.51
CACFD1-202ENST00000316948 CIRBPQ14011 172 aaKnown RBP11.84□□□□□ -0.51
CACFD1-202ENST00000316948 DEFB112Q30KQ8 113 aa11.84□□□□□ -0.51
CACFD1-202ENST00000316948 Q9H8V8 135 aa11.84□□□□□ -0.51
CACFD1-202ENST00000316948 LINC00308Q8TCZ7 52 aa11.83□□□□□ -0.52
CACFD1-202ENST00000316948 SONP18583 2426 aaKnown RBP11.83□□□□□ -0.52
CACFD1-202ENST00000316948 COX6A2Q02221 97 aa11.83□□□□□ -0.52
CACFD1-202ENST00000316948 DGAT2L7PQ6IED9 249 aa11.83□□□□□ -0.52
CACFD1-202ENST00000316948 Q8N2B8 174 aa11.82□□□□□ -0.52
CACFD1-202ENST00000316948 SMCR5Q8TEV8 140 aa11.82□□□□□ -0.52
CACFD1-202ENST00000316948 LINC01587Q99440 93 aa11.82□□□□□ -0.52
CACFD1-202ENST00000316948 USP24Q9UPU5 2620 aa11.82□□□□□ -0.52
CACFD1-202ENST00000316948 NDUFA1O15239 70 aa11.81□□□□□ -0.52
CACFD1-202ENST00000316948 TIMM17BO60830 172 aa11.81□□□□□ -0.52
CACFD1-202ENST00000316948 NACAE9PAV3 2078 aa11.81□□□□□ -0.52
CACFD1-202ENST00000316948 B4DSR2 109 aa11.81□□□□□ -0.52
CACFD1-202ENST00000316948 NBPF19A0A087WUL8 3843 aa11.8□□□□□ -0.52
CACFD1-202ENST00000316948 COX7A2LO14548 114 aa11.8□□□□□ -0.52
CACFD1-202ENST00000316948 DEFB131AP59861 70 aa11.79□□□□□ -0.52
CACFD1-202ENST00000316948 DAZ2Q13117 558 aaKnown RBP11.79□□□□□ -0.52
CACFD1-202ENST00000316948 DAZ4Q86SG3 579 aaKnown RBP11.79□□□□□ -0.52
CACFD1-202ENST00000316948 MAPK1IP1LQ8NDC0 245 aa11.79□□□□□ -0.52
CACFD1-202ENST00000316948 PRORYQ9H606 182 aa11.79□□□□□ -0.52
CACFD1-202ENST00000316948 DAZ3Q9NR90 486 aaKnown RBP11.79□□□□□ -0.52
CACFD1-202ENST00000316948 NDUFA7O95182 113 aa11.79□□□□□ -0.52
CACFD1-202ENST00000316948 SOSTDC1Q6X4U4 206 aa11.79□□□□□ -0.52
CACFD1-202ENST00000316948 NOTCH3Q9UM47 2321 aa11.78□□□□□ -0.52
CACFD1-202ENST00000316948 EDA2RQ9HAV5 297 aa11.78□□□□□ -0.52
CACFD1-202ENST00000316948 ACYP1P07311 99 aa11.78□□□□□ -0.52
CACFD1-202ENST00000316948 BAALC-AS2P0C853 105 aa11.78□□□□□ -0.52
CACFD1-202ENST00000316948 HOXD3P31249 432 aaPredicted RBP11.78□□□□□ -0.52
CACFD1-202ENST00000316948 NAV2Q8IVL1 2488 aa11.77□□□□□ -0.53
CACFD1-202ENST00000316948 AKAP9Q99996 3911 aa11.76□□□□□ -0.53
CACFD1-202ENST00000316948 IGHV3OR16-12A0A075B7B8 117 aa11.76□□□□□ -0.53
CACFD1-202ENST00000316948 TRAV13-1A0A0B4J241 112 aa11.76□□□□□ -0.53
CACFD1-202ENST00000316948 C9orf153Q5TBE3 101 aa11.76□□□□□ -0.53
CACFD1-202ENST00000316948 TMEM126AQ9H061 195 aa11.76□□□□□ -0.53
CACFD1-202ENST00000316948 TIRAPP58753 221 aa11.76□□□□□ -0.53
CACFD1-202ENST00000316948 CFAP161Q6P656 301 aa11.76□□□□□ -0.53
CACFD1-202ENST00000316948 CCDC168Q8NDH2 2452 aa11.76□□□□□ -0.53
CACFD1-202ENST00000316948 RBMY1BA6NDE4 496 aaKnown RBP11.75□□□□□ -0.53
CACFD1-202ENST00000316948 RBMY1EA6NEQ0 496 aaKnown RBP11.75□□□□□ -0.53
CACFD1-202ENST00000316948 RBMY1DP0C7P1 496 aaKnown RBP11.75□□□□□ -0.53
CACFD1-202ENST00000316948 DEFB136Q30KP8 78 aa11.75□□□□□ -0.53
CACFD1-202ENST00000316948 LINC00643Q86TS7 51 aa11.75□□□□□ -0.53
CACFD1-202ENST00000316948 PRIMA1Q86XR5 153 aa11.75□□□□□ -0.53
CACFD1-202ENST00000316948 ZNF415Q09FC8 603 aa11.75□□□□□ -0.53
CACFD1-202ENST00000316948 LINC00242Q5T6M2 205 aa11.75□□□□□ -0.53
CACFD1-202ENST00000316948 C18orf65Q6ZTR6 163 aa11.74□□□□□ -0.53
CACFD1-202ENST00000316948 FAM218AQ96MZ4 157 aa11.74□□□□□ -0.53
CACFD1-202ENST00000316948 IMUPQ9GZP8 106 aa11.74□□□□□ -0.53
CACFD1-202ENST00000316948 PPDPFQ9H3Y8 114 aa11.74□□□□□ -0.53
CACFD1-202ENST00000316948 Q9HAA7 133 aa11.74□□□□□ -0.53
CACFD1-202ENST00000316948 CHD6Q8TD26 2715 aa11.74□□□□□ -0.53
CACFD1-202ENST00000316948 IGLV5-45A0A087WSX0 123 aa11.73□□□□□ -0.53
CACFD1-202ENST00000316948 PIK3CD-AS1Q5SR53 167 aa11.73□□□□□ -0.53
CACFD1-202ENST00000316948 GAGE2AQ6NT46 116 aa11.73□□□□□ -0.53
CACFD1-202ENST00000316948 LINC00694P0DN24 101 aa11.73□□□□□ -0.53
CACFD1-202ENST00000316948 IGHV3-53P01767 116 aa11.73□□□□□ -0.53
CACFD1-202ENST00000316948 SLURP1P55000 103 aa11.73□□□□□ -0.53
CACFD1-202ENST00000316948 HERVK_113P63121 156 aa11.73□□□□□ -0.53
CACFD1-202ENST00000316948 IGLV5-39A0A0G2JS06 123 aa11.72□□□□□ -0.53
CACFD1-202ENST00000316948 C3orf22Q8N5N4 141 aa11.72□□□□□ -0.53
CACFD1-202ENST00000316948 VPREB3Q9UKI3 123 aa11.72□□□□□ -0.53
CACFD1-202ENST00000316948 SMIM1B2RUZ4 78 aa11.72□□□□□ -0.53
CACFD1-202ENST00000316948 HIST2H2BDQ6DRA6 164 aa11.71□□□□□ -0.53
CACFD1-202ENST00000316948 WNK1Q9H4A3 2382 aa11.71□□□□□ -0.54
CACFD1-202ENST00000316948 TMEM89A2RUT3 159 aa11.71□□□□□ -0.54
CACFD1-202ENST00000316948 BEAN1Q3B7T3 259 aa11.71□□□□□ -0.54
CACFD1-202ENST00000316948 RNF152Q8N8N0 203 aa11.71□□□□□ -0.54
CACFD1-202ENST00000316948 KLK5Q9Y337 293 aaPredicted RBP11.71□□□□□ -0.54
CACFD1-202ENST00000316948 C2CD3Q4AC94 2353 aa11.7□□□□□ -0.54
CACFD1-202ENST00000316948 TRACP01848 142 aa11.7□□□□□ -0.54
CACFD1-202ENST00000316948 C22orf24Q9Y442 160 aa11.7□□□□□ -0.54
CACFD1-202ENST00000316948 LINC01356Q8N9X3 169 aa11.7□□□□□ -0.54
CACFD1-202ENST00000316948 RS1O15537 224 aa11.69□□□□□ -0.54
CACFD1-202ENST00000316948 DNAJC30Q96LL9 226 aa11.69□□□□□ -0.54
CACFD1-202ENST00000316948 UBE2E2Q96LR5 201 aa11.69□□□□□ -0.54
CACFD1-202ENST00000316948 ZNF702PQ9H963 129 aa11.69□□□□□ -0.54
CACFD1-202ENST00000316948 COPS9Q8WXC6 57 aa11.68□□□□□ -0.54
CACFD1-202ENST00000316948 C11orf72Q8NBR9 251 aa11.68□□□□□ -0.54
CACFD1-202ENST00000316948 UQCRQO14949 82 aa11.67□□□□□ -0.54
CACFD1-202ENST00000316948 PEMTQ9UBM1 199 aa11.67□□□□□ -0.54
CACFD1-202ENST00000316948 LOC107984640A0A0U1RRK4 108 aa11.66□□□□□ -0.54
CACFD1-202ENST00000316948 PRB1P04280 392 aa11.66□□□□□ -0.54
CACFD1-202ENST00000316948 JMJD1CQ15652 2540 aa11.66□□□□□ -0.54
CACFD1-202ENST00000316948 MALP21145 153 aa11.65□□□□□ -0.54
CACFD1-202ENST00000316948 INAFM2P0DMQ5 153 aa11.65□□□□□ -0.54
CACFD1-202ENST00000316948 HIST2H2BCQ6DN03 193 aa11.65□□□□□ -0.54
CACFD1-202ENST00000316948 SDIM1Q6ZPB5 146 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms