RNA–Protein interactions for RNA: ENST00000316052.5

EXOSC4-201, Transcript of exosome component 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC4, Length 887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-201ENST00000316052 COLCA2A8K830 154 aa11.01□□□□□ -0.65
EXOSC4-201ENST00000316052 PHOX2AO14813 284 aa11.01□□□□□ -0.65
EXOSC4-201ENST00000316052 FOXA3P55318 350 aaPredicted RBP11.01□□□□□ -0.65
EXOSC4-201ENST00000316052 HIGD2BQ4VC39 106 aa11.01□□□□□ -0.65
EXOSC4-201ENST00000316052 CFAP161Q6P656 301 aa11.01□□□□□ -0.65
EXOSC4-201ENST00000316052 PRSS3P2Q8NHM4 247 aa11.01□□□□□ -0.65
EXOSC4-201ENST00000316052 RPL39LQ96EH5 51 aaKnown RBP11.01□□□□□ -0.65
EXOSC4-201ENST00000316052 RNASE7Q9H1E1 156 aaKnown RBP11.01□□□□□ -0.65
EXOSC4-201ENST00000316052 K7EN84 100 aa11□□□□□ -0.65
EXOSC4-201ENST00000316052 RPS10P46783 165 aaKnown RBP11□□□□□ -0.65
EXOSC4-201ENST00000316052 CHCHD10Q8WYQ3 142 aaPredicted RBP11□□□□□ -0.65
EXOSC4-201ENST00000316052 RPP21Q9H633 154 aaKnown RBP11□□□□□ -0.65
EXOSC4-201ENST00000316052 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.99□□□□□ -0.65
EXOSC4-201ENST00000316052 IGKV2-29A2NJV5 120 aaPredicted RBP10.99□□□□□ -0.65
EXOSC4-201ENST00000316052 GTSF1Q8WW33 167 aa10.99□□□□□ -0.65
EXOSC4-201ENST00000316052 BTF3L4Q96K17 158 aa10.99□□□□□ -0.65
EXOSC4-201ENST00000316052 OSTCQ9NRP0 149 aa10.99□□□□□ -0.65
EXOSC4-201ENST00000316052 FAM231DQ6ZW35 169 aa10.98□□□□□ -0.65
EXOSC4-201ENST00000316052 TRBV24-1A0A075B6N3 115 aa10.97□□□□□ -0.65
EXOSC4-201ENST00000316052 IGKV2-24A0A0C4DH68 120 aa10.97□□□□□ -0.65
EXOSC4-201ENST00000316052 S100PP25815 95 aa10.97□□□□□ -0.65
EXOSC4-201ENST00000316052 MAJINQ3KP22 176 aa10.97□□□□□ -0.65
EXOSC4-201ENST00000316052 AMMECR1LQ6DCA0 310 aa10.97□□□□□ -0.65
EXOSC4-201ENST00000316052 RNASEKQ6P5S7 137 aaKnown RBP10.97□□□□□ -0.65
EXOSC4-201ENST00000316052 TRAV9-1A0A075B6T8 112 aa10.96□□□□□ -0.65
EXOSC4-201ENST00000316052 GVQW2A0A096LPI5 108 aaPredicted RBP10.96□□□□□ -0.65
EXOSC4-201ENST00000316052 NCR2O95944 276 aa10.96□□□□□ -0.65
EXOSC4-201ENST00000316052 FGF6P10767 208 aa10.96□□□□□ -0.65
EXOSC4-201ENST00000316052 FOXI1Q12951 378 aa10.96□□□□□ -0.65
EXOSC4-201ENST00000316052 C7orf33Q8WU49 177 aa10.96□□□□□ -0.65
EXOSC4-201ENST00000316052 FAM231BA6NCW3 169 aa10.95□□□□□ -0.66
EXOSC4-201ENST00000316052 SDHAF1A6NFY7 115 aa10.95□□□□□ -0.66
EXOSC4-201ENST00000316052 RNF213Q63HN8 5207 aa10.94□□□□□ -0.66
EXOSC4-201ENST00000316052 H7C423 109 aa10.94□□□□□ -0.66
EXOSC4-201ENST00000316052 APCSP02743 223 aa10.94□□□□□ -0.66
EXOSC4-201ENST00000316052 RAB5AP20339 215 aa10.94□□□□□ -0.66
EXOSC4-201ENST00000316052 STPG4Q8N801 248 aa10.94□□□□□ -0.66
EXOSC4-201ENST00000316052 A0A096LNI7 61 aa10.93□□□□□ -0.66
EXOSC4-201ENST00000316052 GAS8-AS1O95177 125 aa10.93□□□□□ -0.66
EXOSC4-201ENST00000316052 PRR3P79522 188 aaKnown RBP10.93□□□□□ -0.66
EXOSC4-201ENST00000316052 XCL1P47992 114 aa10.92□□□□□ -0.66
EXOSC4-201ENST00000316052 ODF1Q14990 250 aa10.92□□□□□ -0.66
EXOSC4-201ENST00000316052 CT83Q5H943 113 aa10.92□□□□□ -0.66
EXOSC4-201ENST00000316052 SMIM15Q7Z3B0 74 aa10.92□□□□□ -0.66
EXOSC4-201ENST00000316052 OR5A1Q8NGJ0 315 aa10.92□□□□□ -0.66
EXOSC4-201ENST00000316052 LINC00526Q96FQ7 95 aa10.92□□□□□ -0.66
EXOSC4-201ENST00000316052 V9GYV3 84 aa10.92□□□□□ -0.66
EXOSC4-201ENST00000316052 I3L3M4 83 aa10.91□□□□□ -0.66
EXOSC4-201ENST00000316052 GATCO43716 136 aaKnown RBP10.91□□□□□ -0.66
EXOSC4-201ENST00000316052 PMCHP20382 165 aa10.91□□□□□ -0.66
EXOSC4-201ENST00000316052 LINC01600Q96MT4 127 aa10.91□□□□□ -0.66
EXOSC4-201ENST00000316052 TRBV6-5A0A0K0K1A5 114 aa10.9□□□□□ -0.66
EXOSC4-201ENST00000316052 LINC00959A0A1B0GUT2 108 aa10.9□□□□□ -0.66
EXOSC4-201ENST00000316052 TSHBP01222 138 aa10.9□□□□□ -0.66
EXOSC4-201ENST00000316052 ESDP10768 282 aa10.9□□□□□ -0.66
EXOSC4-201ENST00000316052 ZNF25P17030 456 aaPredicted RBP10.9□□□□□ -0.66
EXOSC4-201ENST00000316052 TGIF2-C20orf24A0A0A6YYL0 155 aa10.89□□□□□ -0.67
EXOSC4-201ENST00000316052 CCL25O15444 150 aa10.89□□□□□ -0.67
EXOSC4-201ENST00000316052 TMA7Q9Y2S6 64 aaKnown RBP10.89□□□□□ -0.67
EXOSC4-201ENST00000316052 SMIM27A0A1W2PRY6 76 aa10.88□□□□□ -0.67
EXOSC4-201ENST00000316052 A8MWL6 223 aa10.88□□□□□ -0.67
EXOSC4-201ENST00000316052 C1orf196B1AJZ1 125 aa10.88□□□□□ -0.67
EXOSC4-201ENST00000316052 TMEM101Q96IK0 257 aa10.88□□□□□ -0.67
EXOSC4-201ENST00000316052 IGHV1-58A0A0C4DH39 117 aa10.87□□□□□ -0.67
EXOSC4-201ENST00000316052 COX19Q49B96 90 aa10.87□□□□□ -0.67
EXOSC4-201ENST00000316052 ST20Q9HBF5 79 aa10.87□□□□□ -0.67
EXOSC4-201ENST00000316052 CDC42SE2Q9NRR3 84 aa10.87□□□□□ -0.67
EXOSC4-201ENST00000316052 POLR2KP53803 58 aaKnown RBP10.86□□□□□ -0.67
EXOSC4-201ENST00000316052 RAB5BP61020 215 aa10.86□□□□□ -0.67
EXOSC4-201ENST00000316052 BORCS7Q96B45 105 aa10.86□□□□□ -0.67
EXOSC4-201ENST00000316052 TSKUQ8WUA8 353 aa10.85□□□□□ -0.67
EXOSC4-201ENST00000316052 CARD19Q96LW7 228 aa10.85□□□□□ -0.67
EXOSC4-201ENST00000316052 LINC00474Q9P2X8 69 aa10.85□□□□□ -0.67
EXOSC4-201ENST00000316052 A0A0J9YXV3 536 aa10.84□□□□□ -0.67
EXOSC4-201ENST00000316052 KRTAP10-8P60410 259 aa10.84□□□□□ -0.67
EXOSC4-201ENST00000316052 SRSF9Q13242 221 aaKnown RBP eCLIP10.84□□□□□ -0.67
EXOSC4-201ENST00000316052 SS18Q15532 418 aa10.84□□□□□ -0.67
EXOSC4-201ENST00000316052 CD164L2Q6UWJ8 174 aa10.84□□□□□ -0.67
EXOSC4-201ENST00000316052 MRPL52Q86TS9 123 aaKnown RBP10.84□□□□□ -0.67
EXOSC4-201ENST00000316052 ZNF664Q8N3J9 261 aa10.84□□□□□ -0.67
EXOSC4-201ENST00000316052 MRAP2Q96G30 205 aa10.84□□□□□ -0.67
EXOSC4-201ENST00000316052 TRBV27A0A0K0K1C4 114 aa10.83□□□□□ -0.68
EXOSC4-201ENST00000316052 RAB4AP20338 218 aa10.83□□□□□ -0.68
EXOSC4-201ENST00000316052 SYCNQ0VAF6 134 aa10.83□□□□□ -0.68
EXOSC4-201ENST00000316052 SPINK6Q6UWN8 80 aa10.83□□□□□ -0.68
EXOSC4-201ENST00000316052 TMEM191AQ9H0A3 160 aa10.83□□□□□ -0.68
EXOSC4-201ENST00000316052 NAT8BQ9UHF3 227 aa10.83□□□□□ -0.68
EXOSC4-201ENST00000316052 A0A1B0GUT8 65 aa10.82□□□□□ -0.68
EXOSC4-201ENST00000316052 HIGD1CA8MV81 97 aa10.82□□□□□ -0.68
EXOSC4-201ENST00000316052 ZNF561-AS1K7EIQ3 104 aa10.81□□□□□ -0.68
EXOSC4-201ENST00000316052 MT-ND6P03923 174 aa10.81□□□□□ -0.68
EXOSC4-201ENST00000316052 ATP5L2Q7Z4Y8 100 aa10.81□□□□□ -0.68
EXOSC4-201ENST00000316052 AMN1Q8IY45 258 aa10.81□□□□□ -0.68
EXOSC4-201ENST00000316052 SMKR1H3BMG3 65 aa10.8□□□□□ -0.68
EXOSC4-201ENST00000316052 PTTG1IPP53801 180 aa10.8□□□□□ -0.68
EXOSC4-201ENST00000316052 Q6ZRP5 223 aa10.8□□□□□ -0.68
EXOSC4-201ENST00000316052 GNB1LQ9BYB4 327 aa10.8□□□□□ -0.68
EXOSC4-201ENST00000316052 PKIGQ9Y2B9 76 aa10.8□□□□□ -0.68
EXOSC4-201ENST00000316052 IGLV4-69A0A075B6H9 119 aa10.79□□□□□ -0.68
EXOSC4-201ENST00000316052 TRGC2P03986 189 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms