RNA–Protein interactions for RNA: ENST00000313433.11

RPA2-201, Transcript of replication protein A2, humanhuman

TSL 1 (best) BASIC

Gene RPA2, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA2-201ENST00000313433 PPP1R17O96001 155 aa11.9□□□□□ -0.5
RPA2-201ENST00000313433 PRSS1P07477 247 aa11.9□□□□□ -0.5
RPA2-201ENST00000313433 RNASEKQ6P5S7 137 aaKnown RBP11.9□□□□□ -0.5
RPA2-201ENST00000313433 CLRN3Q8NCR9 226 aa11.9□□□□□ -0.5
RPA2-201ENST00000313433 IGKV3OR2-268A0A0C4DH90 116 aa11.89□□□□□ -0.51
RPA2-201ENST00000313433 MRPL52Q86TS9 123 aaKnown RBP11.89□□□□□ -0.51
RPA2-201ENST00000313433 PRELID3AQ96N28 172 aa11.89□□□□□ -0.51
RPA2-201ENST00000313433 SRRM2Q9UQ35 2752 aaKnown RBP11.89□□□□□ -0.51
RPA2-201ENST00000313433 TCAPO15273 167 aa11.88□□□□□ -0.51
RPA2-201ENST00000313433 AMMECR1LQ6DCA0 310 aa11.88□□□□□ -0.51
RPA2-201ENST00000313433 ORMDL3Q8N138 153 aa11.88□□□□□ -0.51
RPA2-201ENST00000313433 PHOX2AO14813 284 aa11.87□□□□□ -0.51
RPA2-201ENST00000313433 PPBPP02775 128 aa11.87□□□□□ -0.51
RPA2-201ENST00000313433 RPL39P62891 51 aaKnown RBP11.87□□□□□ -0.51
RPA2-201ENST00000313433 CDC42SE2Q9NRR3 84 aa11.87□□□□□ -0.51
RPA2-201ENST00000313433 UBE2D4Q9Y2X8 147 aa11.87□□□□□ -0.51
RPA2-201ENST00000313433 ZNF25P17030 456 aaPredicted RBP11.86□□□□□ -0.51
RPA2-201ENST00000313433 FCER1GP30273 86 aa11.86□□□□□ -0.51
RPA2-201ENST00000313433 TRAV8-4A0A0B4J246 113 aa11.85□□□□□ -0.51
RPA2-201ENST00000313433 GAGE12HA6NDE8 117 aa11.85□□□□□ -0.51
RPA2-201ENST00000313433 PRSS47A8MTI9 375 aa11.85□□□□□ -0.51
RPA2-201ENST00000313433 C14orf177Q52M58 125 aa11.85□□□□□ -0.51
RPA2-201ENST00000313433 RNASE13Q5GAN3 156 aaKnown RBP11.85□□□□□ -0.51
RPA2-201ENST00000313433 KIR2DL4Q99706 377 aa11.85□□□□□ -0.51
RPA2-201ENST00000313433 KIAA1644Q3SXP7 199 aa11.84□□□□□ -0.51
RPA2-201ENST00000313433 SCXQ7RTU7 201 aa11.84□□□□□ -0.51
RPA2-201ENST00000313433 OR5A1Q8NGJ0 315 aa11.84□□□□□ -0.51
RPA2-201ENST00000313433 CHCHD10Q8WYQ3 142 aaPredicted RBP11.84□□□□□ -0.51
RPA2-201ENST00000313433 RPS10P5Q9NQ39 176 aa11.84□□□□□ -0.51
RPA2-201ENST00000313433 MYCBP2O75592 4640 aa11.83□□□□□ -0.52
RPA2-201ENST00000313433 TRAV9-1A0A075B6T8 112 aa11.83□□□□□ -0.52
RPA2-201ENST00000313433 LOC389332A0A1B0GUA5 103 aa11.83□□□□□ -0.52
RPA2-201ENST00000313433 LINC00959A0A1B0GUT2 108 aa11.83□□□□□ -0.52
RPA2-201ENST00000313433 SLPIP03973 132 aa11.83□□□□□ -0.52
RPA2-201ENST00000313433 RHEBQ15382 184 aa11.83□□□□□ -0.52
RPA2-201ENST00000313433 Q6ZUT4 128 aa11.83□□□□□ -0.52
RPA2-201ENST00000313433 ZNF664Q8N3J9 261 aa11.83□□□□□ -0.52
RPA2-201ENST00000313433 C15orf56Q8N910 161 aa11.83□□□□□ -0.52
RPA2-201ENST00000313433 OPRPNQ99935 248 aaPredicted RBP11.83□□□□□ -0.52
RPA2-201ENST00000313433 APOC3P02656 99 aa11.82□□□□□ -0.52
RPA2-201ENST00000313433 FOXI1Q12951 378 aa11.82□□□□□ -0.52
RPA2-201ENST00000313433 CSDC2Q9Y534 153 aaKnown RBP11.81□□□□□ -0.52
RPA2-201ENST00000313433 PANO1I0J062 215 aa11.8□□□□□ -0.52
RPA2-201ENST00000313433 SLC7A5P1Q8MH63 180 aa11.8□□□□□ -0.52
RPA2-201ENST00000313433 CIRBP-AS1Q8TBR5 109 aa11.8□□□□□ -0.52
RPA2-201ENST00000313433 TMEM101Q96IK0 257 aa11.8□□□□□ -0.52
RPA2-201ENST00000313433 CHAC1Q9BUX1 264 aa11.8□□□□□ -0.52
RPA2-201ENST00000313433 TIMM21Q9BVV7 248 aa11.8□□□□□ -0.52
RPA2-201ENST00000313433 LAMTOR2Q9Y2Q5 125 aa11.8□□□□□ -0.52
RPA2-201ENST00000313433 TGIF2-C20orf24A0A0A6YYL0 155 aa11.79□□□□□ -0.52
RPA2-201ENST00000313433 CCL25O15444 150 aa11.79□□□□□ -0.52
RPA2-201ENST00000313433 INAFM2P0DMQ5 153 aa11.79□□□□□ -0.52
RPA2-201ENST00000313433 XCL1P47992 114 aa11.79□□□□□ -0.52
RPA2-201ENST00000313433 C9orf163Q8N9P6 203 aa11.79□□□□□ -0.52
RPA2-201ENST00000313433 DGAT2L7PQ6IED9 249 aa11.78□□□□□ -0.52
RPA2-201ENST00000313433 LINC00528Q8N1L1 170 aa11.78□□□□□ -0.52
RPA2-201ENST00000313433 Q8N8P6 123 aa11.78□□□□□ -0.52
RPA2-201ENST00000313433 YPEL4Q96NS1 127 aa11.78□□□□□ -0.52
RPA2-201ENST00000313433 GNB1LQ9BYB4 327 aa11.78□□□□□ -0.52
RPA2-201ENST00000313433 MAP1LC3AQ9H492 121 aa11.78□□□□□ -0.52
RPA2-201ENST00000313433 KRTAP10-4P60372 401 aaPredicted RBP11.77□□□□□ -0.53
RPA2-201ENST00000313433 CNBPP62633 177 aaKnown RBP11.77□□□□□ -0.53
RPA2-201ENST00000313433 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.77□□□□□ -0.53
RPA2-201ENST00000313433 hDV102S1A0JD36 115 aa11.76□□□□□ -0.53
RPA2-201ENST00000313433 FAM229AH3BQW9 127 aa11.76□□□□□ -0.53
RPA2-201ENST00000313433 S100PP25815 95 aa11.76□□□□□ -0.53
RPA2-201ENST00000313433 IFI27P40305 119 aaPredicted RBP11.76□□□□□ -0.53
RPA2-201ENST00000313433 ALKBH7Q9BT30 221 aaPredicted RBP11.76□□□□□ -0.53
RPA2-201ENST00000313433 FLG2Q5D862 2391 aaPredicted RBP11.76□□□□□ -0.53
RPA2-201ENST00000313433 SDIM1Q6ZPB5 146 aa11.75□□□□□ -0.53
RPA2-201ENST00000313433 SVBPQ8N300 66 aa11.75□□□□□ -0.53
RPA2-201ENST00000313433 HIGD2BQ4VC39 106 aa11.74□□□□□ -0.53
RPA2-201ENST00000313433 ZC2HC1BQ5TFG8 222 aa11.74□□□□□ -0.53
RPA2-201ENST00000313433 MRPL18Q9H0U6 180 aaKnown RBP11.74□□□□□ -0.53
RPA2-201ENST00000313433 SPANXA1Q9NS26 97 aa11.74□□□□□ -0.53
RPA2-201ENST00000313433 TRAV13-1A0A0B4J241 112 aa11.73□□□□□ -0.53
RPA2-201ENST00000313433 SNAPINO95295 136 aa11.73□□□□□ -0.53
RPA2-201ENST00000313433 RAB5AP20339 215 aa11.73□□□□□ -0.53
RPA2-201ENST00000313433 MRPS36P82909 103 aaKnown RBP11.73□□□□□ -0.53
RPA2-201ENST00000313433 LINC00526Q96FQ7 95 aa11.73□□□□□ -0.53
RPA2-201ENST00000313433 IGLV4-3A0A075B6K6 122 aa11.72□□□□□ -0.53
RPA2-201ENST00000313433 CD164L2Q6UWJ8 174 aa11.72□□□□□ -0.53
RPA2-201ENST00000313433 TMEM18Q96B42 140 aa11.72□□□□□ -0.53
RPA2-201ENST00000313433 PKHD1L1Q86WI1 4243 aa11.71□□□□□ -0.53
RPA2-201ENST00000313433 GVQW2A0A096LPI5 108 aaPredicted RBP11.71□□□□□ -0.53
RPA2-201ENST00000313433 SS18Q15532 418 aa11.71□□□□□ -0.53
RPA2-201ENST00000313433 LINC00173Q6ZV60 143 aa11.71□□□□□ -0.53
RPA2-201ENST00000313433 PYGO1Q9Y3Y4 419 aa11.71□□□□□ -0.53
RPA2-201ENST00000313433 HERC1Q15751 4861 aa11.7□□□□□ -0.54
RPA2-201ENST00000313433 CIRBPQ14011 172 aaKnown RBP11.7□□□□□ -0.54
RPA2-201ENST00000313433 C2orf66Q6UXQ4 117 aa11.7□□□□□ -0.54
RPA2-201ENST00000313433 LINC01546A6NGU7 62 aa11.69□□□□□ -0.54
RPA2-201ENST00000313433 IGIPA6NJ69 53 aa11.69□□□□□ -0.54
RPA2-201ENST00000313433 C1orf196B1AJZ1 125 aa11.69□□□□□ -0.54
RPA2-201ENST00000313433 FABP9Q0Z7S8 132 aa11.69□□□□□ -0.54
RPA2-201ENST00000313433 NDUFA5Q16718 116 aa11.69□□□□□ -0.54
RPA2-201ENST00000313433 URB1-AS1Q96HZ7 61 aa11.69□□□□□ -0.54
RPA2-201ENST00000313433 NXT2Q9NPJ8 142 aaKnown RBP11.69□□□□□ -0.54
RPA2-201ENST00000313433 CHTF8P0CG12 524 aa11.68□□□□□ -0.54
RPA2-201ENST00000313433 CBLN2Q8IUK8 224 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 112.9 ms