RNA–Protein interactions for RNA: ENST00000308873.10

RUNX3-201, Transcript of runt related transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RUNX3, Length 3,861 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-201ENST00000308873 KLK9Q2XQG4 91 aa10.84□□□□□ -0.67
RUNX3-201ENST00000308873 VSIG2Q96IQ7 327 aa10.83□□□□□ -0.68
RUNX3-201ENST00000308873 NDUFV3P56181 108 aaKnown RBP10.83□□□□□ -0.68
RUNX3-201ENST00000308873 TEX15Q9BXT5 2789 aa10.83□□□□□ -0.68
RUNX3-201ENST00000308873 H7C423 109 aa10.83□□□□□ -0.68
RUNX3-201ENST00000308873 GAGE12JA6NER3 117 aa10.82□□□□□ -0.68
RUNX3-201ENST00000308873 GAGE4Q13068 117 aa10.82□□□□□ -0.68
RUNX3-201ENST00000308873 MIAQ16674 131 aa10.82□□□□□ -0.68
RUNX3-201ENST00000308873 C11orf68Q9H3H3 251 aaKnown RBP10.82□□□□□ -0.68
RUNX3-201ENST00000308873 NF1P21359 2839 aa10.81□□□□□ -0.68
RUNX3-201ENST00000308873 GAGE7O76087 117 aa10.81□□□□□ -0.68
RUNX3-201ENST00000308873 GAGE12FP0CL80 117 aa10.81□□□□□ -0.68
RUNX3-201ENST00000308873 GAGE12GP0CL81 117 aa10.81□□□□□ -0.68
RUNX3-201ENST00000308873 GAGE12IP0CL82 117 aa10.81□□□□□ -0.68
RUNX3-201ENST00000308873 MXRA5Q9NR99 2828 aa10.8□□□□□ -0.68
RUNX3-201ENST00000308873 CHCHD5Q9BSY4 110 aa10.8□□□□□ -0.68
RUNX3-201ENST00000308873 YAE1D1Q9NRH1 226 aa10.8□□□□□ -0.68
RUNX3-201ENST00000308873 TRBV30A0A0K0K1B3 111 aa10.79□□□□□ -0.68
RUNX3-201ENST00000308873 MRPS36P82909 103 aaKnown RBP10.79□□□□□ -0.68
RUNX3-201ENST00000308873 COX6A2Q02221 97 aa10.79□□□□□ -0.68
RUNX3-201ENST00000308873 UBE2D4Q9Y2X8 147 aa10.79□□□□□ -0.68
RUNX3-201ENST00000308873 SBSPONQ8IVN8 264 aa10.79□□□□□ -0.68
RUNX3-201ENST00000308873 PIK3CD-AS1Q5SR53 167 aa10.78□□□□□ -0.68
RUNX3-201ENST00000308873 TMEM101Q96IK0 257 aa10.78□□□□□ -0.68
RUNX3-201ENST00000308873 UBE2L6O14933 153 aa10.78□□□□□ -0.68
RUNX3-201ENST00000308873 SMIM20Q8N5G0 67 aa10.78□□□□□ -0.68
RUNX3-201ENST00000308873 RBMY1BA6NDE4 496 aaKnown RBP10.77□□□□□ -0.68
RUNX3-201ENST00000308873 RBMY1EA6NEQ0 496 aaKnown RBP10.77□□□□□ -0.68
RUNX3-201ENST00000308873 RBMY1DP0C7P1 496 aaKnown RBP10.77□□□□□ -0.68
RUNX3-201ENST00000308873 STHQ8IWL8 128 aa10.77□□□□□ -0.68
RUNX3-201ENST00000308873 ODF3Q96PU9 254 aa10.77□□□□□ -0.69
RUNX3-201ENST00000308873 CHCHD7Q9BUK0 85 aa10.77□□□□□ -0.69
RUNX3-201ENST00000308873 Q9HAA7 133 aa10.77□□□□□ -0.69
RUNX3-201ENST00000308873 LINC00694P0DN24 101 aa10.76□□□□□ -0.69
RUNX3-201ENST00000308873 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.76□□□□□ -0.69
RUNX3-201ENST00000308873 LITAFQ99732 161 aa10.76□□□□□ -0.69
RUNX3-201ENST00000308873 SPANXA1Q9NS26 97 aa10.76□□□□□ -0.69
RUNX3-201ENST00000308873 TRGV2A0A075B6R0 118 aa10.76□□□□□ -0.69
RUNX3-201ENST00000308873 TINCRA0A1B0GVN0 87 aa10.76□□□□□ -0.69
RUNX3-201ENST00000308873 LINC01356Q8N9X3 169 aa10.76□□□□□ -0.69
RUNX3-201ENST00000308873 OR13C6PQ8NH95 151 aa10.76□□□□□ -0.69
RUNX3-201ENST00000308873 INSP01308 110 aa10.75□□□□□ -0.69
RUNX3-201ENST00000308873 VPREB3Q9UKI3 123 aa10.75□□□□□ -0.69
RUNX3-201ENST00000308873 GAGE2AQ6NT46 116 aa10.75□□□□□ -0.69
RUNX3-201ENST00000308873 PYGO1Q9Y3Y4 419 aa10.74□□□□□ -0.69
RUNX3-201ENST00000308873 NIPBLQ6KC79 2804 aaeCLIP10.74□□□□□ -0.69
RUNX3-201ENST00000308873 RPL35AP18077 110 aaKnown RBP10.74□□□□□ -0.69
RUNX3-201ENST00000308873 PFN2P35080 140 aa10.74□□□□□ -0.69
RUNX3-201ENST00000308873 RPL36AP83881 106 aaKnown RBP10.74□□□□□ -0.69
RUNX3-201ENST00000308873 LINC00308Q8TCZ7 52 aa10.74□□□□□ -0.69
RUNX3-201ENST00000308873 RPL36ALQ969Q0 106 aaKnown RBP10.74□□□□□ -0.69
RUNX3-201ENST00000308873 CITED1Q99966 193 aa10.74□□□□□ -0.69
RUNX3-201ENST00000308873 NHLRC4P0CG21 123 aaPredicted RBP10.73□□□□□ -0.69
RUNX3-201ENST00000308873 LINC00158P58513 81 aa10.73□□□□□ -0.69
RUNX3-201ENST00000308873 Q8N2B8 174 aa10.73□□□□□ -0.69
RUNX3-201ENST00000308873 MAP6D1Q9H9H5 199 aa10.73□□□□□ -0.69
RUNX3-201ENST00000308873 NBEAL2Q6ZNJ1 2754 aa10.73□□□□□ -0.69
RUNX3-201ENST00000308873 FAM236AA0A1B0GUQ0 79 aa10.73□□□□□ -0.69
RUNX3-201ENST00000308873 FAM236BA0A1B0GV22 79 aa10.73□□□□□ -0.69
RUNX3-201ENST00000308873 Q6ZTI0 123 aa10.73□□□□□ -0.69
RUNX3-201ENST00000308873 PEMTQ9UBM1 199 aa10.73□□□□□ -0.69
RUNX3-201ENST00000308873 IGSF10Q6WRI0 2623 aa10.73□□□□□ -0.69
RUNX3-201ENST00000308873 LST1O00453 97 aa10.73□□□□□ -0.69
RUNX3-201ENST00000308873 NOP10Q9NPE3 64 aaKnown RBP10.73□□□□□ -0.69
RUNX3-201ENST00000308873 RNASE1P07998 156 aaKnown RBP10.72□□□□□ -0.69
RUNX3-201ENST00000308873 BAALC-AS2P0C853 105 aa10.72□□□□□ -0.69
RUNX3-201ENST00000308873 H3BT86 120 aa10.71□□□□□ -0.69
RUNX3-201ENST00000308873 FAM104AQ969W3 186 aa10.71□□□□□ -0.69
RUNX3-201ENST00000308873 PRB1P04280 392 aa10.71□□□□□ -0.69
RUNX3-201ENST00000308873 DNAL4O96015 105 aa10.71□□□□□ -0.7
RUNX3-201ENST00000308873 SPANXDQ9BXN6 97 aa10.71□□□□□ -0.7
RUNX3-201ENST00000308873 SPANXCQ9NY87 97 aa10.71□□□□□ -0.7
RUNX3-201ENST00000308873 HERVK_113P63121 156 aa10.7□□□□□ -0.7
RUNX3-201ENST00000308873 DAZ2Q13117 558 aaKnown RBP10.7□□□□□ -0.7
RUNX3-201ENST00000308873 DAZ4Q86SG3 579 aaKnown RBP10.7□□□□□ -0.7
RUNX3-201ENST00000308873 DAZ3Q9NR90 486 aaKnown RBP10.7□□□□□ -0.7
RUNX3-201ENST00000308873 LINC00242Q5T6M2 205 aa10.7□□□□□ -0.7
RUNX3-201ENST00000308873 BRI3O95415 125 aa10.69□□□□□ -0.7
RUNX3-201ENST00000308873 LOC100131303A0A0U1RQF7 123 aa10.69□□□□□ -0.7
RUNX3-201ENST00000308873 CITED2Q99967 270 aaPredicted RBP10.69□□□□□ -0.7
RUNX3-201ENST00000308873 ZNF702PQ9H963 129 aa10.69□□□□□ -0.7
RUNX3-201ENST00000308873 PLA2G2AP14555 144 aa10.68□□□□□ -0.7
RUNX3-201ENST00000308873 ATP5G1P05496 136 aa10.68□□□□□ -0.7
RUNX3-201ENST00000308873 WFDC10AQ9H1F0 79 aa10.68□□□□□ -0.7
RUNX3-201ENST00000308873 CRPP02741 224 aa10.68□□□□□ -0.7
RUNX3-201ENST00000308873 CLPSL2Q6UWE3 100 aa10.68□□□□□ -0.7
RUNX3-201ENST00000308873 C5orf38Q86SI9 138 aa10.68□□□□□ -0.7
RUNX3-201ENST00000308873 TMEM89A2RUT3 159 aa10.67□□□□□ -0.7
RUNX3-201ENST00000308873 TRGV4A0A0C4DH28 118 aa10.67□□□□□ -0.7
RUNX3-201ENST00000308873 NDUFA1O15239 70 aa10.67□□□□□ -0.7
RUNX3-201ENST00000308873 PAX4O43316 350 aa10.67□□□□□ -0.7
RUNX3-201ENST00000308873 SOSTDC1Q6X4U4 206 aa10.67□□□□□ -0.7
RUNX3-201ENST00000308873 MIR7-3HGQ8N6C7 128 aa10.66□□□□□ -0.7
RUNX3-201ENST00000308873 GCN1Q92616 2671 aaKnown RBP10.66□□□□□ -0.7
RUNX3-201ENST00000308873 A0A096LPF7 62 aa10.66□□□□□ -0.7
RUNX3-201ENST00000308873 COX7A2LO14548 114 aa10.65□□□□□ -0.7
RUNX3-201ENST00000308873 DEFB130BP0DP73 79 aa10.65□□□□□ -0.7
RUNX3-201ENST00000308873 DEFB130AP0DP74 79 aa10.65□□□□□ -0.7
RUNX3-201ENST00000308873 FLNAP21333 2647 aaKnown RBP10.65□□□□□ -0.71
RUNX3-201ENST00000308873 SMIM1B2RUZ4 78 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms