RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 ABCA12Q86UK0 2595 aa3.02□□□□□ -1.93
USH2A-201ENST00000307340 IGKV1D-37A0A075B6S9 117 aa3.02□□□□□ -1.93
USH2A-201ENST00000307340 DEFB130BP0DP73 79 aa3.02□□□□□ -1.93
USH2A-201ENST00000307340 DEFB130AP0DP74 79 aa3.02□□□□□ -1.93
USH2A-201ENST00000307340 LELP1Q5T871 98 aa3.02□□□□□ -1.93
USH2A-201ENST00000307340 UBE2D1P51668 147 aa3.01□□□□□ -1.93
USH2A-201ENST00000307340 NOP10Q9NPE3 64 aaKnown RBP3.01□□□□□ -1.93
USH2A-201ENST00000307340 PRO0628Q9UI54 55 aa3.01□□□□□ -1.93
USH2A-201ENST00000307340 IGHV3-33P01772 117 aa3.01□□□□□ -1.93
USH2A-201ENST00000307340 DCANP1Q8TF63 244 aa3.01□□□□□ -1.93
USH2A-201ENST00000307340 Q8NA96 180 aa3.01□□□□□ -1.93
USH2A-201ENST00000307340 NUPR2A6NF83 97 aa3.01□□□□□ -1.93
USH2A-201ENST00000307340 CTSZQ9UBR2 303 aa3.01□□□□□ -1.93
USH2A-201ENST00000307340 RNF223E7ERA6 249 aa3.01□□□□□ -1.93
USH2A-201ENST00000307340 GYPEP15421 78 aa3.01□□□□□ -1.93
USH2A-201ENST00000307340 RNASE8Q8TDE3 154 aaKnown RBP3.01□□□□□ -1.93
USH2A-201ENST00000307340 XCL1P47992 114 aa3.01□□□□□ -1.93
USH2A-201ENST00000307340 RS1O15537 224 aa3.01□□□□□ -1.93
USH2A-201ENST00000307340 Q8N7P7 452 aa3.01□□□□□ -1.93
USH2A-201ENST00000307340 A6NDX4 124 aa3.01□□□□□ -1.93
USH2A-201ENST00000307340 LINC00526Q96FQ7 95 aa3.01□□□□□ -1.93
USH2A-201ENST00000307340 POM121L12Q8N7R1 296 aa3.01□□□□□ -1.93
USH2A-201ENST00000307340 SERP1Q9Y6X1 66 aa3.01□□□□□ -1.93
USH2A-201ENST00000307340 IGLV4-69A0A075B6H9 119 aa3.01□□□□□ -1.93
USH2A-201ENST00000307340 IGHV3-35A0A0C4DH35 117 aa3□□□□□ -1.93
USH2A-201ENST00000307340 Q8N976 141 aa3□□□□□ -1.93
USH2A-201ENST00000307340 XAGE1AQ9HD64 81 aa3□□□□□ -1.93
USH2A-201ENST00000307340 IGKV3OR2-268A0A0C4DH90 116 aa3□□□□□ -1.93
USH2A-201ENST00000307340 PCP2Q8IVA1 136 aa3□□□□□ -1.93
USH2A-201ENST00000307340 XCL2Q9UBD3 114 aa3□□□□□ -1.93
USH2A-201ENST00000307340 IGKV3D-20A0A0C4DH25 116 aa3□□□□□ -1.93
USH2A-201ENST00000307340 LYNX1P0DP58 116 aa3□□□□□ -1.93
USH2A-201ENST00000307340 TMEM254Q8TBM7 123 aa3□□□□□ -1.93
USH2A-201ENST00000307340 AMELXQ99217 191 aa3□□□□□ -1.93
USH2A-201ENST00000307340 MIR7-3HGQ8N6C7 128 aa3□□□□□ -1.93
USH2A-201ENST00000307340 SPRY2O43597 315 aa3□□□□□ -1.93
USH2A-201ENST00000307340 IGHV3-23P01764 117 aa3□□□□□ -1.93
USH2A-201ENST00000307340 FAM236DA0A1B0GTK5 79 aa3□□□□□ -1.93
USH2A-201ENST00000307340 FAM236CP0DP71 79 aa3□□□□□ -1.93
USH2A-201ENST00000307340 EGFEM1PQ0D2K5 195 aa3□□□□□ -1.93
USH2A-201ENST00000307340 TRAV12-2A0A075B6T6 113 aa3□□□□□ -1.93
USH2A-201ENST00000307340 CCKP06307 115 aa3□□□□□ -1.93
USH2A-201ENST00000307340 CRYGAP11844 174 aa3□□□□□ -1.93
USH2A-201ENST00000307340 REG3AQ06141 175 aa3□□□□□ -1.93
USH2A-201ENST00000307340 SPAG11BQ08648 103 aa3□□□□□ -1.93
USH2A-201ENST00000307340 SMIM26A0A096LP01 95 aa3□□□□□ -1.93
USH2A-201ENST00000307340 IGHV3-38A0A0C4DH36 116 aa3□□□□□ -1.93
USH2A-201ENST00000307340 PRYO14603 147 aa3□□□□□ -1.93
USH2A-201ENST00000307340 USP9XQ93008 2570 aaPredicted RBP3□□□□□ -1.93
USH2A-201ENST00000307340 IGHV3OR16-13A0A075B7E8 117 aa3□□□□□ -1.93
USH2A-201ENST00000307340 IGHV3-74A0A0B4J1X5 117 aa3□□□□□ -1.93
USH2A-201ENST00000307340 FXYD2P54710 66 aa3□□□□□ -1.93
USH2A-201ENST00000307340 Q8N2B8 174 aa3□□□□□ -1.93
USH2A-201ENST00000307340 MAP6D1Q9H9H5 199 aa3□□□□□ -1.93
USH2A-201ENST00000307340 IGLV4-3A0A075B6K6 122 aa3□□□□□ -1.93
USH2A-201ENST00000307340 C16orf95Q9H693 158 aa3□□□□□ -1.93
USH2A-201ENST00000307340 PATE2Q6UY27 113 aa2.99□□□□□ -1.93
USH2A-201ENST00000307340 C7orf33Q8WU49 177 aa2.99□□□□□ -1.93
USH2A-201ENST00000307340 BEAN1Q3B7T3 259 aa2.99□□□□□ -1.93
USH2A-201ENST00000307340 IGIPA6NJ69 53 aa2.99□□□□□ -1.93
USH2A-201ENST00000307340 IGHV3-49A0A0A0MS15 119 aa2.99□□□□□ -1.93
USH2A-201ENST00000307340 FSHBP01225 129 aa2.99□□□□□ -1.93
USH2A-201ENST00000307340 E7EUB6 86 aa2.99□□□□□ -1.93
USH2A-201ENST00000307340 C11orf71Q6IPW1 123 aa2.99□□□□□ -1.93
USH2A-201ENST00000307340 IGHV3-64A0A075B6Q5 118 aa2.99□□□□□ -1.93
USH2A-201ENST00000307340 FN1P02751 2386 aaKnown RBP2.99□□□□□ -1.93
USH2A-201ENST00000307340 ZNF503-AS2A6NEH8 195 aa2.99□□□□□ -1.93
USH2A-201ENST00000307340 LMO4P61968 165 aa2.99□□□□□ -1.93
USH2A-201ENST00000307340 IGKV2D-24A0A075B6R9 120 aa2.99□□□□□ -1.93
USH2A-201ENST00000307340 C5orf38Q86SI9 138 aa2.99□□□□□ -1.93
USH2A-201ENST00000307340 SPTBN4Q9H254 2564 aa2.99□□□□□ -1.93
USH2A-201ENST00000307340 ATP1A1-AS1Q5TC04 95 aa2.99□□□□□ -1.93
USH2A-201ENST00000307340 IGLV5-45A0A087WSX0 123 aa2.99□□□□□ -1.93
USH2A-201ENST00000307340 CASC2Q6XLA1 102 aa2.99□□□□□ -1.93
USH2A-201ENST00000307340 IGLV2-8P01709 118 aa2.98□□□□□ -1.93
USH2A-201ENST00000307340 TRAV10A0A0B4J240 114 aa2.98□□□□□ -1.93
USH2A-201ENST00000307340 PRO3102Q9H379 93 aa2.98□□□□□ -1.93
USH2A-201ENST00000307340 HCG22E2RYF7 251 aa2.98□□□□□ -1.93
USH2A-201ENST00000307340 C2orf91Q6ZV80 131 aa2.98□□□□□ -1.93
USH2A-201ENST00000307340 FHL3Q13643 280 aa2.98□□□□□ -1.93
USH2A-201ENST00000307340 DEFB112Q30KQ8 113 aa2.98□□□□□ -1.93
USH2A-201ENST00000307340 BRD3OSQ6XYD6 125 aa2.98□□□□□ -1.93
USH2A-201ENST00000307340 G3V318 75 aa2.98□□□□□ -1.93
USH2A-201ENST00000307340 LECT2O14960 151 aa2.98□□□□□ -1.93
USH2A-201ENST00000307340 DNAJC9-AS1A6NH13 148 aa2.98□□□□□ -1.93
USH2A-201ENST00000307340 PMAIP1Q13794 54 aa2.98□□□□□ -1.93
USH2A-201ENST00000307340 C10orf25Q5T742 122 aa2.98□□□□□ -1.93
USH2A-201ENST00000307340 C11orf45Q8TAV5 145 aa2.97□□□□□ -1.93
USH2A-201ENST00000307340 C2CD3Q4AC94 2353 aa2.97□□□□□ -1.93
USH2A-201ENST00000307340 C17orf77Q96MU5 243 aa2.97□□□□□ -1.93
USH2A-201ENST00000307340 ZNF73O43830 326 aaPredicted RBP2.97□□□□□ -1.93
USH2A-201ENST00000307340 USP9YO00507 2555 aaPredicted RBP2.97□□□□□ -1.93
USH2A-201ENST00000307340 SEM1Q6ZVN7 128 aa2.97□□□□□ -1.93
USH2A-201ENST00000307340 CD24P25063 80 aa2.97□□□□□ -1.93
USH2A-201ENST00000307340 RITA1Q96K30 269 aa2.97□□□□□ -1.93
USH2A-201ENST00000307340 DOPEY1Q5JWR5 2465 aa2.97□□□□□ -1.93
USH2A-201ENST00000307340 WISP2O76076 250 aa2.97□□□□□ -1.93
USH2A-201ENST00000307340 Q8N814 137 aa2.97□□□□□ -1.93
USH2A-201ENST00000307340 S4R3C0 116 aa2.96□□□□□ -1.93
USH2A-201ENST00000307340 SMKR1H3BMG3 65 aa2.96□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 422.1 ms