RNA–Protein interactions for RNA: ENST00000297071.8

TRA2A-201, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRA2A, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-201ENST00000297071 Q6ZSN1 163 aa13.86□□□□□ -0.19
TRA2A-201ENST00000297071 DUX5Q96PT3 197 aa13.86□□□□□ -0.19
TRA2A-201ENST00000297071 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.85□□□□□ -0.19
TRA2A-201ENST00000297071 IGHV3-73A0A0B4J1V6 119 aa13.85□□□□□ -0.19
TRA2A-201ENST00000297071 IGKV2-29A2NJV5 120 aaPredicted RBP13.85□□□□□ -0.19
TRA2A-201ENST00000297071 RBMY1BA6NDE4 496 aaKnown RBP13.85□□□□□ -0.19
TRA2A-201ENST00000297071 RBMY1EA6NEQ0 496 aaKnown RBP13.85□□□□□ -0.19
TRA2A-201ENST00000297071 KNCNA6PVL3 124 aa13.85□□□□□ -0.19
TRA2A-201ENST00000297071 RBMY1DP0C7P1 496 aaKnown RBP13.85□□□□□ -0.19
TRA2A-201ENST00000297071 DEFB131AP59861 70 aa13.85□□□□□ -0.19
TRA2A-201ENST00000297071 SS18L2Q9UHA2 77 aa13.85□□□□□ -0.19
TRA2A-201ENST00000297071 TRACP01848 142 aa13.85□□□□□ -0.19
TRA2A-201ENST00000297071 RNASE13Q5GAN3 156 aaKnown RBP13.84□□□□□ -0.19
TRA2A-201ENST00000297071 A8MZ25 164 aa13.83□□□□□ -0.2
TRA2A-201ENST00000297071 HERV-K104P63124 156 aa13.83□□□□□ -0.2
TRA2A-201ENST00000297071 LINC01356Q8N9X3 169 aa13.83□□□□□ -0.2
TRA2A-201ENST00000297071 VPREB3Q9UKI3 123 aa13.83□□□□□ -0.2
TRA2A-201ENST00000297071 CCDC179H3BU77 68 aa13.83□□□□□ -0.2
TRA2A-201ENST00000297071 GNLYP22749 145 aa13.83□□□□□ -0.2
TRA2A-201ENST00000297071 SPTAN1Q13813 2472 aaKnown RBP13.82□□□□□ -0.2
TRA2A-201ENST00000297071 SDIM1Q6ZPB5 146 aa13.82□□□□□ -0.2
TRA2A-201ENST00000297071 Q6ZSV7 163 aa13.82□□□□□ -0.2
TRA2A-201ENST00000297071 ZNF702PQ9H963 129 aa13.82□□□□□ -0.2
TRA2A-201ENST00000297071 PEMTQ9UBM1 199 aa13.82□□□□□ -0.2
TRA2A-201ENST00000297071 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.82□□□□□ -0.28e-11■■■□□ 14.9
TRA2A-201ENST00000297071 NBASA2RRP1 2371 aa13.81□□□□□ -0.2
TRA2A-201ENST00000297071 IGHV3OR16-12A0A075B7B8 117 aa13.81□□□□□ -0.2
TRA2A-201ENST00000297071 LINC00242Q5T6M2 205 aa13.81□□□□□ -0.2
TRA2A-201ENST00000297071 FAM222AQ5U5X8 452 aa13.81□□□□□ -0.2
TRA2A-201ENST00000297071 DGAT2L7PQ6IED9 249 aa13.81□□□□□ -0.2
TRA2A-201ENST00000297071 TRBV10-1A0A0K0K1A3 114 aa13.8□□□□□ -0.2
TRA2A-201ENST00000297071 INSP01308 110 aa13.8□□□□□ -0.2
TRA2A-201ENST00000297071 PF4P02776 101 aa13.8□□□□□ -0.2
TRA2A-201ENST00000297071 DOPEY1Q5JWR5 2465 aa13.8□□□□□ -0.2
TRA2A-201ENST00000297071 LY6DQ14210 128 aa13.8□□□□□ -0.2
TRA2A-201ENST00000297071 Q9H8V8 135 aa13.8□□□□□ -0.2
TRA2A-201ENST00000297071 Q9UF83 564 aa13.8□□□□□ -0.2
TRA2A-201ENST00000297071 FSHBP01225 129 aa13.79□□□□□ -0.2
TRA2A-201ENST00000297071 NPC2P61916 151 aa13.79□□□□□ -0.2
TRA2A-201ENST00000297071 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.79□□□□□ -0.2
TRA2A-201ENST00000297071 IL17DQ8TAD2 202 aa13.79□□□□□ -0.2
TRA2A-201ENST00000297071 ZNF625Q96I27 306 aaPredicted RBP13.79□□□□□ -0.2
TRA2A-201ENST00000297071 SMIM1B2RUZ4 78 aa13.78□□□□□ -0.2
TRA2A-201ENST00000297071 Q6YL49 198 aa13.78□□□□□ -0.2
TRA2A-201ENST00000297071 LINC00643Q86TS7 51 aa13.78□□□□□ -0.2
TRA2A-201ENST00000297071 LINC01587Q99440 93 aa13.78□□□□□ -0.2
TRA2A-201ENST00000297071 MAP6D1Q9H9H5 199 aa13.78□□□□□ -0.2
TRA2A-201ENST00000297071 ATP5G1P05496 136 aa13.78□□□□□ -0.2
TRA2A-201ENST00000297071 HTN1P15515 57 aa13.78□□□□□ -0.2
TRA2A-201ENST00000297071 COX6A2Q02221 97 aa13.78□□□□□ -0.2
TRA2A-201ENST00000297071 Q8N2B8 174 aa13.77□□□□□ -0.21
TRA2A-201ENST00000297071 DAZ2Q13117 558 aaKnown RBP13.76□□□□□ -0.21
TRA2A-201ENST00000297071 DAZ4Q86SG3 579 aaKnown RBP13.76□□□□□ -0.21
TRA2A-201ENST00000297071 DAND5Q8N907 189 aa13.76□□□□□ -0.21
TRA2A-201ENST00000297071 TMEM126AQ9H061 195 aa13.76□□□□□ -0.21
TRA2A-201ENST00000297071 DAZ3Q9NR90 486 aaKnown RBP13.76□□□□□ -0.21
TRA2A-201ENST00000297071 A0A096LNT2 108 aa13.75□□□□□ -0.21
TRA2A-201ENST00000297071 FAM110AQ9BQ89 295 aa13.75□□□□□ -0.21
TRA2A-201ENST00000297071 IGHV3-38A0A0C4DH36 116 aa13.74□□□□□ -0.21
TRA2A-201ENST00000297071 CXCL5P42830 114 aa13.74□□□□□ -0.21
TRA2A-201ENST00000297071 SOSTDC1Q6X4U4 206 aa13.74□□□□□ -0.21
TRA2A-201ENST00000297071 OVOL2Q9BRP0 275 aa13.74□□□□□ -0.21
TRA2A-201ENST00000297071 F5H768 121 aa13.74□□□□□ -0.21
TRA2A-201ENST00000297071 SLURP1P55000 103 aa13.74□□□□□ -0.21
TRA2A-201ENST00000297071 AKAP6Q13023 2319 aa13.73□□□□□ -0.21
TRA2A-201ENST00000297071 INAFM2P0DMQ5 153 aa13.73□□□□□ -0.21
TRA2A-201ENST00000297071 RPL36AP83881 106 aaKnown RBP13.73□□□□□ -0.21
TRA2A-201ENST00000297071 RPL36ALQ969Q0 106 aaKnown RBP13.73□□□□□ -0.21
TRA2A-201ENST00000297071 TRAV13-2A0A0B4J235 113 aa13.72□□□□□ -0.21
TRA2A-201ENST00000297071 TRAV25A0A0B4J276 109 aa13.72□□□□□ -0.21
TRA2A-201ENST00000297071 C4orf3Q8WVX3 66 aa13.72□□□□□ -0.21
TRA2A-201ENST00000297071 SORL1Q92673 2214 aa13.72□□□□□ -0.21
TRA2A-201ENST00000297071 ABCA12Q86UK0 2595 aa13.72□□□□□ -0.21
TRA2A-201ENST00000297071 RPL28P46779 137 aaKnown RBP13.71□□□□□ -0.21
TRA2A-201ENST00000297071 MEIG1Q5JSS6 88 aa13.71□□□□□ -0.21
TRA2A-201ENST00000297071 PRIMA1Q86XR5 153 aa13.71□□□□□ -0.21
TRA2A-201ENST00000297071 CDC42SE2Q9NRR3 84 aa13.71□□□□□ -0.21
TRA2A-201ENST00000297071 K7EQD1 137 aa13.7□□□□□ -0.22
TRA2A-201ENST00000297071 DEFB114Q30KQ6 69 aa13.7□□□□□ -0.22
TRA2A-201ENST00000297071 HIST2H2BCQ6DN03 193 aa13.7□□□□□ -0.22
TRA2A-201ENST00000297071 HIST2H2BDQ6DRA6 164 aa13.7□□□□□ -0.22
TRA2A-201ENST00000297071 PRM2P04554 102 aa13.69□□□□□ -0.22
TRA2A-201ENST00000297071 BAALC-AS2P0C853 105 aa13.69□□□□□ -0.22
TRA2A-201ENST00000297071 DYNLRB2Q8TF09 96 aa13.69□□□□□ -0.22
TRA2A-201ENST00000297071 C5orf38Q86SI9 138 aa13.68□□□□□ -0.22
TRA2A-201ENST00000297071 RELNP78509 3460 aa13.68□□□□□ -0.22
TRA2A-201ENST00000297071 LINC00694P0DN24 101 aa13.67□□□□□ -0.22
TRA2A-201ENST00000297071 C22orf24Q9Y442 160 aa13.67□□□□□ -0.22
TRA2A-201ENST00000297071 NTM-AS1Q6ZSK4 140 aa13.67□□□□□ -0.22
TRA2A-201ENST00000297071 UBR5O95071 2799 aaPredicted RBP13.66□□□□□ -0.22
TRA2A-201ENST00000297071 CHCHD5Q9BSY4 110 aa13.66□□□□□ -0.22
TRA2A-201ENST00000297071 ZFHX3Q15911 3703 aa13.66□□□□□ -0.22
TRA2A-201ENST00000297071 KRTAP21-3Q3LHN1 58 aa13.65□□□□□ -0.22
TRA2A-201ENST00000297071 C1orf158Q8N1D5 194 aa13.65□□□□□ -0.22
TRA2A-201ENST00000297071 SMCR5Q8TEV8 140 aa13.64□□□□□ -0.23
TRA2A-201ENST00000297071 FAM236AA0A1B0GUQ0 79 aa13.64□□□□□ -0.23
TRA2A-201ENST00000297071 FAM236BA0A1B0GV22 79 aa13.64□□□□□ -0.23
TRA2A-201ENST00000297071 DEFB136Q30KP8 78 aa13.63□□□□□ -0.23
TRA2A-201ENST00000297071 C18orf65Q6ZTR6 163 aa13.63□□□□□ -0.23
TRA2A-201ENST00000297071 TMEM243Q9BU79 118 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms