RNA–Protein interactions for RNA: ENST00000296800.4

PRKAA1-201, Transcript of protein kinase AMP-activated catalytic subunit alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PRKAA1, Length 1,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAA1-201ENST00000296800 SPANXB1Q9NS25 103 aaPredicted RBP5.38□□□□□ -1.55
PRKAA1-201ENST00000296800 SPANXA1Q9NS26 97 aa5.38□□□□□ -1.55
PRKAA1-201ENST00000296800 PYGO1Q9Y3Y4 419 aa5.38□□□□□ -1.55
PRKAA1-201ENST00000296800 IGHV3-73A0A0B4J1V6 119 aa5.37□□□□□ -1.55
PRKAA1-201ENST00000296800 LEPROTO15243 131 aa5.37□□□□□ -1.55
PRKAA1-201ENST00000296800 NDUFA7O95182 113 aa5.37□□□□□ -1.55
PRKAA1-201ENST00000296800 IGHV3-53P01767 116 aa5.37□□□□□ -1.55
PRKAA1-201ENST00000296800 NHLRC4P0CG21 123 aaPredicted RBP5.37□□□□□ -1.55
PRKAA1-201ENST00000296800 P0DMU3 169 aa5.37□□□□□ -1.55
PRKAA1-201ENST00000296800 FAM231AP0DMU4 169 aa5.37□□□□□ -1.55
PRKAA1-201ENST00000296800 FAM231CP0DMU5 169 aa5.37□□□□□ -1.55
PRKAA1-201ENST00000296800 HTN1P15515 57 aa5.37□□□□□ -1.55
PRKAA1-201ENST00000296800 EMP1P54849 157 aa5.37□□□□□ -1.55
PRKAA1-201ENST00000296800 C12orf74Q32Q52 190 aa5.37□□□□□ -1.55
PRKAA1-201ENST00000296800 PLEKHB2Q96CS7 222 aa5.37□□□□□ -1.55
PRKAA1-201ENST00000296800 ZNF479Q96JC4 524 aa5.37□□□□□ -1.55
PRKAA1-201ENST00000296800 CITED2Q99967 270 aaPredicted RBP5.37□□□□□ -1.55
PRKAA1-201ENST00000296800 FAM110AQ9BQ89 295 aa5.37□□□□□ -1.55
PRKAA1-201ENST00000296800 MRPL16Q9NX20 251 aaKnown RBP5.37□□□□□ -1.55
PRKAA1-201ENST00000296800 CBY1Q9Y3M2 126 aa5.37□□□□□ -1.55
PRKAA1-201ENST00000296800 AGRNO00468 2067 aa5.36□□□□□ -1.55
PRKAA1-201ENST00000296800 TMEM223A0PJW6 202 aa5.36□□□□□ -1.55
PRKAA1-201ENST00000296800 J3QQQ9 107 aa5.36□□□□□ -1.55
PRKAA1-201ENST00000296800 ZNF22P17026 224 aaPredicted RBP5.36□□□□□ -1.55
PRKAA1-201ENST00000296800 TSPEAR-AS2P59090 65 aa5.36□□□□□ -1.55
PRKAA1-201ENST00000296800 COTL1Q14019 142 aa5.36□□□□□ -1.55
PRKAA1-201ENST00000296800 RRN3P1Q2M238 152 aa5.36□□□□□ -1.55
PRKAA1-201ENST00000296800 LYRM7Q5U5X0 104 aa5.36□□□□□ -1.55
PRKAA1-201ENST00000296800 ZNRF2Q8NHG8 242 aa5.36□□□□□ -1.55
PRKAA1-201ENST00000296800 LINC01006Q8NI28 216 aa5.36□□□□□ -1.55
PRKAA1-201ENST00000296800 RNASE8Q8TDE3 154 aaKnown RBP5.36□□□□□ -1.55
PRKAA1-201ENST00000296800 TMEM263Q8WUH6 116 aaKnown RBP5.36□□□□□ -1.55
PRKAA1-201ENST00000296800 AMELXQ99217 191 aa5.36□□□□□ -1.55
PRKAA1-201ENST00000296800 VCX2Q9H322 139 aa5.36□□□□□ -1.55
PRKAA1-201ENST00000296800 TGP01266 2768 aa5.36□□□□□ -1.55
PRKAA1-201ENST00000296800 NACAE9PAV3 2078 aa5.35□□□□□ -1.55
PRKAA1-201ENST00000296800 TRAV4A0A0B4J268 109 aa5.35□□□□□ -1.55
PRKAA1-201ENST00000296800 A0A0J9YY99 117 aa5.35□□□□□ -1.55
PRKAA1-201ENST00000296800 IGLL5B9A064 214 aa5.35□□□□□ -1.55
PRKAA1-201ENST00000296800 K7ERU9 68 aa5.35□□□□□ -1.55
PRKAA1-201ENST00000296800 HILS1P60008 231 aa5.35□□□□□ -1.55
PRKAA1-201ENST00000296800 OCIAD2Q56VL3 154 aa5.35□□□□□ -1.55
PRKAA1-201ENST00000296800 HIST2H2BDQ6DRA6 164 aa5.35□□□□□ -1.55
PRKAA1-201ENST00000296800 C11orf44Q8N8P7 122 aa5.35□□□□□ -1.55
PRKAA1-201ENST00000296800 DEFB104AQ8WTQ1 72 aa5.35□□□□□ -1.55
PRKAA1-201ENST00000296800 CHCHD7Q9BUK0 85 aa5.35□□□□□ -1.55
PRKAA1-201ENST00000296800 XCL2Q9UBD3 114 aa5.35□□□□□ -1.55
PRKAA1-201ENST00000296800 NSD1Q96L73 2696 aaPredicted RBP5.34□□□□□ -1.55
PRKAA1-201ENST00000296800 TRGV1A0A0A0MS02 117 aa5.34□□□□□ -1.55
PRKAA1-201ENST00000296800 TRBV10-1A0A0K0K1A3 114 aa5.34□□□□□ -1.55
PRKAA1-201ENST00000296800 TMEM238C9JI98 176 aa5.34□□□□□ -1.55
PRKAA1-201ENST00000296800 K7EQD1 137 aa5.34□□□□□ -1.55
PRKAA1-201ENST00000296800 SAP30O75446 220 aa5.34□□□□□ -1.55
PRKAA1-201ENST00000296800 IGLV1-51P01701 117 aa5.34□□□□□ -1.55
PRKAA1-201ENST00000296800 UBE2D1P51668 147 aa5.34□□□□□ -1.55
PRKAA1-201ENST00000296800 MRPS36P82909 103 aaKnown RBP5.34□□□□□ -1.55
PRKAA1-201ENST00000296800 SMAGPQ0VAQ4 97 aa5.34□□□□□ -1.55
PRKAA1-201ENST00000296800 SRSF9Q13242 221 aaKnown RBP eCLIP5.34□□□□□ -1.55
PRKAA1-201ENST00000296800 LCE1EQ5T753 118 aa5.34□□□□□ -1.55
PRKAA1-201ENST00000296800 Q6ZUT4 128 aa5.34□□□□□ -1.55
PRKAA1-201ENST00000296800 C1orf158Q8N1D5 194 aa5.34□□□□□ -1.55
PRKAA1-201ENST00000296800 C16orf74Q96GX8 76 aa5.34□□□□□ -1.55
PRKAA1-201ENST00000296800 TIMM21Q9BVV7 248 aa5.34□□□□□ -1.55
PRKAA1-201ENST00000296800 C1QTNF4Q9BXJ3 329 aa5.34□□□□□ -1.55
PRKAA1-201ENST00000296800 UBE2D4Q9Y2X8 147 aa5.34□□□□□ -1.55
PRKAA1-201ENST00000296800 CUBNO60494 3623 aa5.34□□□□□ -1.55
PRKAA1-201ENST00000296800 VPS13CQ709C8 3753 aa5.33□□□□□ -1.56
PRKAA1-201ENST00000296800 MXRA5Q9NR99 2828 aa5.33□□□□□ -1.56
PRKAA1-201ENST00000296800 IGHV3OR16-12A0A075B7B8 117 aa5.33□□□□□ -1.56
PRKAA1-201ENST00000296800 A0A0J9YXV3 536 aa5.33□□□□□ -1.56
PRKAA1-201ENST00000296800 TINCRA0A1B0GVN0 87 aa5.33□□□□□ -1.56
PRKAA1-201ENST00000296800 AZU1P20160 251 aa5.33□□□□□ -1.56
PRKAA1-201ENST00000296800 RBX1P62877 108 aa5.33□□□□□ -1.56
PRKAA1-201ENST00000296800 RPL36AP83881 106 aaKnown RBP5.33□□□□□ -1.56
PRKAA1-201ENST00000296800 OPRPNQ99935 248 aaPredicted RBP5.33□□□□□ -1.56
PRKAA1-201ENST00000296800 SMR3AQ99954 134 aa5.33□□□□□ -1.56
PRKAA1-201ENST00000296800 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.32□□□□□ -1.56
PRKAA1-201ENST00000296800 IGKV2-29A2NJV5 120 aaPredicted RBP5.32□□□□□ -1.56
PRKAA1-201ENST00000296800 CIDEAO60543 219 aa5.32□□□□□ -1.56
PRKAA1-201ENST00000296800 IGHV3-30P01768 117 aa5.32□□□□□ -1.56
PRKAA1-201ENST00000296800 PRM2P04554 102 aa5.32□□□□□ -1.56
PRKAA1-201ENST00000296800 IGHV3-30-5P0DP03 117 aa5.32□□□□□ -1.56
PRKAA1-201ENST00000296800 NDUFA11Q86Y39 141 aa5.32□□□□□ -1.56
PRKAA1-201ENST00000296800 SLC25A29Q8N8R3 303 aa5.32□□□□□ -1.56
PRKAA1-201ENST00000296800 IGHV1-58A0A0C4DH39 117 aa5.31□□□□□ -1.56
PRKAA1-201ENST00000296800 TSPAN13O95857 204 aa5.31□□□□□ -1.56
PRKAA1-201ENST00000296800 MALP21145 153 aa5.31□□□□□ -1.56
PRKAA1-201ENST00000296800 DAZ2Q13117 558 aaKnown RBP5.31□□□□□ -1.56
PRKAA1-201ENST00000296800 DAZ4Q86SG3 579 aaKnown RBP5.31□□□□□ -1.56
PRKAA1-201ENST00000296800 DAZ3Q9NR90 486 aaKnown RBP5.31□□□□□ -1.56
PRKAA1-201ENST00000296800 IGHV3-64A0A075B6Q5 118 aa5.3□□□□□ -1.56
PRKAA1-201ENST00000296800 IGLV5-45A0A087WSX0 123 aa5.3□□□□□ -1.56
PRKAA1-201ENST00000296800 A0A0B4J2C4 111 aa5.3□□□□□ -1.56
PRKAA1-201ENST00000296800 IGHV3-38A0A0C4DH36 116 aa5.3□□□□□ -1.56
PRKAA1-201ENST00000296800 IGHV3-30-3P0DP02 117 aa5.3□□□□□ -1.56
PRKAA1-201ENST00000296800 RPL24P83731 157 aaKnown RBP5.3□□□□□ -1.56
PRKAA1-201ENST00000296800 Q6ZTI0 123 aa5.3□□□□□ -1.56
PRKAA1-201ENST00000296800 FAM104AQ969W3 186 aa5.3□□□□□ -1.56
PRKAA1-201ENST00000296800 SPANXDQ9BXN6 97 aa5.3□□□□□ -1.56
PRKAA1-201ENST00000296800 GEMIN7Q9H840 131 aaKnown RBP5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms