RNA–Protein interactions for RNA: ENST00000295701.9

CNOT9-202, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 1 (best) BASIC

Gene CNOT9, Length 1,126 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-202ENST00000295701 TWIST1Q15672 202 aa5.75□□□□□ -1.49
CNOT9-202ENST00000295701 C9orf62Q8N4C0 152 aa5.75□□□□□ -1.49
CNOT9-202ENST00000295701 KANTRA0A1W2PQU2 76 aa5.74□□□□□ -1.49
CNOT9-202ENST00000295701 FGF6P10767 208 aa5.74□□□□□ -1.49
CNOT9-202ENST00000295701 XCL1P47992 114 aa5.74□□□□□ -1.49
CNOT9-202ENST00000295701 GNG4P50150 75 aa5.74□□□□□ -1.49
CNOT9-202ENST00000295701 AMMECR1LQ6DCA0 310 aa5.74□□□□□ -1.49
CNOT9-202ENST00000295701 SPINK6Q6UWN8 80 aa5.74□□□□□ -1.49
CNOT9-202ENST00000295701 MANBALQ9NQG1 85 aa5.74□□□□□ -1.49
CNOT9-202ENST00000295701 XKRY2A2RUG3 117 aa5.73□□□□□ -1.49
CNOT9-202ENST00000295701 FAM231BA6NCW3 169 aa5.73□□□□□ -1.49
CNOT9-202ENST00000295701 HMSDA8MTL9 139 aa5.73□□□□□ -1.49
CNOT9-202ENST00000295701 GAS8-AS1O95177 125 aa5.73□□□□□ -1.49
CNOT9-202ENST00000295701 CTRLP40313 264 aa5.73□□□□□ -1.49
CNOT9-202ENST00000295701 RNASE7Q9H1E1 156 aaKnown RBP5.73□□□□□ -1.49
CNOT9-202ENST00000295701 MED9Q9NWA0 146 aa5.73□□□□□ -1.49
CNOT9-202ENST00000295701 TRAV1-1A0A0B4J248 108 aa5.72□□□□□ -1.49
CNOT9-202ENST00000295701 LINC00959A0A1B0GUT2 108 aa5.72□□□□□ -1.49
CNOT9-202ENST00000295701 K7EN84 100 aa5.72□□□□□ -1.49
CNOT9-202ENST00000295701 CCL25O15444 150 aa5.72□□□□□ -1.49
CNOT9-202ENST00000295701 PTTG1IPP53801 180 aa5.72□□□□□ -1.49
CNOT9-202ENST00000295701 OR5A1Q8NGJ0 315 aa5.72□□□□□ -1.49
CNOT9-202ENST00000295701 BATF3Q9NR55 127 aa5.72□□□□□ -1.49
CNOT9-202ENST00000295701 A0A1W2PNN7 141 aa5.71□□□□□ -1.5
CNOT9-202ENST00000295701 SDHAF1A6NFY7 115 aa5.71□□□□□ -1.5
CNOT9-202ENST00000295701 APCSP02743 223 aa5.71□□□□□ -1.5
CNOT9-202ENST00000295701 PMCHP20382 165 aa5.71□□□□□ -1.5
CNOT9-202ENST00000295701 MEF2BQ02080 365 aaPredicted RBP5.71□□□□□ -1.5
CNOT9-202ENST00000295701 RGS21Q2M5E4 152 aa5.71□□□□□ -1.5
CNOT9-202ENST00000295701 REG3GQ6UW15 175 aa5.71□□□□□ -1.5
CNOT9-202ENST00000295701 Q6ZRP5 223 aa5.71□□□□□ -1.5
CNOT9-202ENST00000295701 OCC1Q8TAD7 63 aa5.71□□□□□ -1.5
CNOT9-202ENST00000295701 SMIM12Q96EX1 92 aa5.71□□□□□ -1.5
CNOT9-202ENST00000295701 CARD19Q96LW7 228 aa5.71□□□□□ -1.5
CNOT9-202ENST00000295701 CNFNQ9BYD5 112 aa5.71□□□□□ -1.5
CNOT9-202ENST00000295701 IGHV1-58A0A0C4DH39 117 aa5.7□□□□□ -1.5
CNOT9-202ENST00000295701 H7C423 109 aa5.7□□□□□ -1.5
CNOT9-202ENST00000295701 NCR2O95944 276 aa5.7□□□□□ -1.5
CNOT9-202ENST00000295701 TSHBP01222 138 aa5.7□□□□□ -1.5
CNOT9-202ENST00000295701 SYCNQ0VAF6 134 aa5.7□□□□□ -1.5
CNOT9-202ENST00000295701 GAGE2BQ13066 116 aa5.7□□□□□ -1.5
CNOT9-202ENST00000295701 RPP21Q9H633 154 aaKnown RBP5.7□□□□□ -1.5
CNOT9-202ENST00000295701 PDE6DO43924 150 aa5.69□□□□□ -1.5
CNOT9-202ENST00000295701 BCL2P10415 239 aa5.69□□□□□ -1.5
CNOT9-202ENST00000295701 ESDP10768 282 aa5.69□□□□□ -1.5
CNOT9-202ENST00000295701 EIF5AP63241 154 aaKnown RBP5.69□□□□□ -1.5
CNOT9-202ENST00000295701 BIN3Q9NQY0 253 aa5.69□□□□□ -1.5
CNOT9-202ENST00000295701 TMEM242Q9NWH2 141 aa5.69□□□□□ -1.5
CNOT9-202ENST00000295701 IGLV4-69A0A075B6H9 119 aa5.68□□□□□ -1.5
CNOT9-202ENST00000295701 I3L3M4 83 aa5.68□□□□□ -1.5
CNOT9-202ENST00000295701 TMEM101Q96IK0 257 aa5.68□□□□□ -1.5
CNOT9-202ENST00000295701 BTF3L4Q96K17 158 aa5.68□□□□□ -1.5
CNOT9-202ENST00000295701 CDC42SE2Q9NRR3 84 aa5.68□□□□□ -1.5
CNOT9-202ENST00000295701 LINC00474Q9P2X8 69 aa5.68□□□□□ -1.5
CNOT9-202ENST00000295701 PSORS1C2Q9UIG4 136 aa5.68□□□□□ -1.5
CNOT9-202ENST00000295701 TRBV6-5A0A0K0K1A5 114 aa5.67□□□□□ -1.5
CNOT9-202ENST00000295701 ZNF25P17030 456 aaPredicted RBP5.67□□□□□ -1.5
CNOT9-202ENST00000295701 CAMPP49913 170 aa5.67□□□□□ -1.5
CNOT9-202ENST00000295701 SS18Q15532 418 aa5.67□□□□□ -1.5
CNOT9-202ENST00000295701 RNASE13Q5GAN3 156 aaKnown RBP5.67□□□□□ -1.5
CNOT9-202ENST00000295701 CD164L2Q6UWJ8 174 aa5.67□□□□□ -1.5
CNOT9-202ENST00000295701 PHF5AQ7RTV0 110 aaKnown RBP5.67□□□□□ -1.5
CNOT9-202ENST00000295701 LOC107984640A0A0U1RRK4 108 aa5.66□□□□□ -1.5
CNOT9-202ENST00000295701 TEX46H3BTG2 121 aa5.66□□□□□ -1.5
CNOT9-202ENST00000295701 GATCO43716 136 aaKnown RBP5.66□□□□□ -1.5
CNOT9-202ENST00000295701 POLR2KP53803 58 aaKnown RBP5.66□□□□□ -1.5
CNOT9-202ENST00000295701 C9orf116Q5BN46 136 aaPredicted RBP5.66□□□□□ -1.5
CNOT9-202ENST00000295701 SMIM15Q7Z3B0 74 aa5.66□□□□□ -1.5
CNOT9-202ENST00000295701 ZNF664Q8N3J9 261 aa5.66□□□□□ -1.5
CNOT9-202ENST00000295701 NUP35Q8NFH5 326 aa5.66□□□□□ -1.5
CNOT9-202ENST00000295701 OPRPNQ99935 248 aaPredicted RBP5.66□□□□□ -1.5
CNOT9-202ENST00000295701 ST20Q9HBF5 79 aa5.66□□□□□ -1.5
CNOT9-202ENST00000295701 SMKR1H3BMG3 65 aa5.65□□□□□ -1.5
CNOT9-202ENST00000295701 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.65□□□□□ -1.5
CNOT9-202ENST00000295701 MT-ND6P03923 174 aa5.65□□□□□ -1.5
CNOT9-202ENST00000295701 C1orf137Q5JT78 98 aa5.65□□□□□ -1.5
CNOT9-202ENST00000295701 TEX261Q6UWH6 196 aa5.65□□□□□ -1.5
CNOT9-202ENST00000295701 C5orf38Q86SI9 138 aa5.65□□□□□ -1.5
CNOT9-202ENST00000295701 MRPL52Q86TS9 123 aaKnown RBP5.65□□□□□ -1.5
CNOT9-202ENST00000295701 KRTAP11-1Q8IUC1 163 aa5.65□□□□□ -1.5
CNOT9-202ENST00000295701 PRR26Q8N8Z3 221 aa5.65□□□□□ -1.5
CNOT9-202ENST00000295701 MRAP2Q96G30 205 aa5.65□□□□□ -1.5
CNOT9-202ENST00000295701 B5MCH6 92 aa5.64□□□□□ -1.51
CNOT9-202ENST00000295701 RAB4AP20338 218 aa5.64□□□□□ -1.51
CNOT9-202ENST00000295701 MALP21145 153 aa5.64□□□□□ -1.51
CNOT9-202ENST00000295701 RPL18AQ02543 176 aaKnown RBP5.64□□□□□ -1.51
CNOT9-202ENST00000295701 EIF5AL1Q6IS14 154 aaKnown RBP5.64□□□□□ -1.51
CNOT9-202ENST00000295701 CAMK2N2Q96S95 79 aa5.64□□□□□ -1.51
CNOT9-202ENST00000295701 PKIGQ9Y2B9 76 aa5.64□□□□□ -1.51
CNOT9-202ENST00000295701 TRAV13-1A0A0B4J241 112 aa5.63□□□□□ -1.51
CNOT9-202ENST00000295701 TRBV27A0A0K0K1C4 114 aa5.63□□□□□ -1.51
CNOT9-202ENST00000295701 C7orf77A4D0Y5 90 aa5.63□□□□□ -1.51
CNOT9-202ENST00000295701 A8MWL6 223 aa5.63□□□□□ -1.51
CNOT9-202ENST00000295701 COX7A2LO14548 114 aa5.63□□□□□ -1.51
CNOT9-202ENST00000295701 APOMO95445 188 aa5.63□□□□□ -1.51
CNOT9-202ENST00000295701 AMN1Q8IY45 258 aa5.63□□□□□ -1.51
CNOT9-202ENST00000295701 ISOC2Q96AB3 205 aa5.63□□□□□ -1.51
CNOT9-202ENST00000295701 MUC2Q02817 5179 aa5.62□□□□□ -1.51
CNOT9-202ENST00000295701 FAM168BA1KXE4 195 aa5.62□□□□□ -1.51
CNOT9-202ENST00000295701 C1orf196B1AJZ1 125 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 117.9 ms