RNA–Protein interactions for RNA: ENST00000291458.9

CCDC58-201, Transcript of coiled-coil domain containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC58, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-201ENST00000291458 NDUFS6O75380 124 aaKnown RBP6.34□□□□□ -1.39
CCDC58-201ENST00000291458 TSHBP01222 138 aa6.34□□□□□ -1.39
CCDC58-201ENST00000291458 RAB4AP20338 218 aa6.34□□□□□ -1.39
CCDC58-201ENST00000291458 HIGD2BQ4VC39 106 aa6.34□□□□□ -1.39
CCDC58-201ENST00000291458 MRAP2Q96G30 205 aa6.34□□□□□ -1.39
CCDC58-201ENST00000291458 NAT8BQ9UHF3 227 aa6.34□□□□□ -1.39
CCDC58-201ENST00000291458 APOBP04114 4563 aaKnown RBP6.34□□□□□ -1.39
CCDC58-201ENST00000291458 FCER1GP30273 86 aa6.33□□□□□ -1.4
CCDC58-201ENST00000291458 RNASE13Q5GAN3 156 aaKnown RBP6.33□□□□□ -1.4
CCDC58-201ENST00000291458 OR5A1Q8NGJ0 315 aa6.33□□□□□ -1.4
CCDC58-201ENST00000291458 CHCHD10Q8WYQ3 142 aaPredicted RBP6.33□□□□□ -1.4
CCDC58-201ENST00000291458 BTF3L4Q96K17 158 aa6.33□□□□□ -1.4
CCDC58-201ENST00000291458 TRAV8-4A0A0B4J246 113 aa6.32□□□□□ -1.4
CCDC58-201ENST00000291458 TRBV6-5A0A0K0K1A5 114 aa6.32□□□□□ -1.4
CCDC58-201ENST00000291458 FAM231BA6NCW3 169 aa6.32□□□□□ -1.4
CCDC58-201ENST00000291458 XCL1P47992 114 aa6.32□□□□□ -1.4
CCDC58-201ENST00000291458 MRPL51Q4U2R6 128 aaKnown RBP6.32□□□□□ -1.4
CCDC58-201ENST00000291458 CIRBP-AS1Q8TBR5 109 aa6.32□□□□□ -1.4
CCDC58-201ENST00000291458 TMEM101Q96IK0 257 aa6.32□□□□□ -1.4
CCDC58-201ENST00000291458 CHAC1Q9BUX1 264 aa6.32□□□□□ -1.4
CCDC58-201ENST00000291458 SMIM27A0A1W2PRY6 76 aa6.31□□□□□ -1.4
CCDC58-201ENST00000291458 C7orf77A4D0Y5 90 aa6.31□□□□□ -1.4
CCDC58-201ENST00000291458 C15orf56Q8N910 161 aa6.31□□□□□ -1.4
CCDC58-201ENST00000291458 NRACQ8N912 160 aa6.31□□□□□ -1.4
CCDC58-201ENST00000291458 FLG2Q5D862 2391 aaPredicted RBP6.3□□□□□ -1.4
CCDC58-201ENST00000291458 PANO1I0J062 215 aa6.3□□□□□ -1.4
CCDC58-201ENST00000291458 CCL25O15444 150 aa6.3□□□□□ -1.4
CCDC58-201ENST00000291458 CHTF8P0CG12 524 aa6.3□□□□□ -1.4
CCDC58-201ENST00000291458 RAB14P61106 215 aa6.3□□□□□ -1.4
CCDC58-201ENST00000291458 SUMO2P61956 95 aaKnown RBP6.3□□□□□ -1.4
CCDC58-201ENST00000291458 HBBP68871 147 aa6.3□□□□□ -1.4
CCDC58-201ENST00000291458 FAM104BQ5XKR9 115 aa6.3□□□□□ -1.4
CCDC58-201ENST00000291458 CLRN3Q8NCR9 226 aa6.3□□□□□ -1.4
CCDC58-201ENST00000291458 D6R8Y8 96 aa6.29□□□□□ -1.4
CCDC58-201ENST00000291458 H7C423 109 aa6.29□□□□□ -1.4
CCDC58-201ENST00000291458 ESDP10768 282 aa6.29□□□□□ -1.4
CCDC58-201ENST00000291458 ZNF25P17030 456 aaPredicted RBP6.29□□□□□ -1.4
CCDC58-201ENST00000291458 CKS2P33552 79 aa6.29□□□□□ -1.4
CCDC58-201ENST00000291458 POLR2KP53803 58 aaKnown RBP6.29□□□□□ -1.4
CCDC58-201ENST00000291458 DGAT2L7PQ6IED9 249 aa6.29□□□□□ -1.4
CCDC58-201ENST00000291458 C9orf163Q8N9P6 203 aa6.29□□□□□ -1.4
CCDC58-201ENST00000291458 LINC00526Q96FQ7 95 aa6.29□□□□□ -1.4
CCDC58-201ENST00000291458 KIR2DL4Q99706 377 aa6.29□□□□□ -1.4
CCDC58-201ENST00000291458 IGHV3-64A0A075B6Q5 118 aa6.28□□□□□ -1.4
CCDC58-201ENST00000291458 TRBV27A0A0K0K1C4 114 aa6.28□□□□□ -1.4
CCDC58-201ENST00000291458 LINC00959A0A1B0GUT2 108 aa6.28□□□□□ -1.4
CCDC58-201ENST00000291458 VCYO14598 125 aa6.28□□□□□ -1.4
CCDC58-201ENST00000291458 NPYP01303 97 aa6.28□□□□□ -1.4
CCDC58-201ENST00000291458 SLPIP03973 132 aa6.28□□□□□ -1.4
CCDC58-201ENST00000291458 FOXI1Q12951 378 aa6.28□□□□□ -1.4
CCDC58-201ENST00000291458 Q6ZUT4 128 aa6.28□□□□□ -1.4
CCDC58-201ENST00000291458 DPH3Q96FX2 82 aa6.28□□□□□ -1.4
CCDC58-201ENST00000291458 SMDT1Q9H4I9 107 aa6.28□□□□□ -1.4
CCDC58-201ENST00000291458 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.27□□□□□ -1.41
CCDC58-201ENST00000291458 TRAV13-1A0A0B4J241 112 aa6.27□□□□□ -1.41
CCDC58-201ENST00000291458 IGKV2-24A0A0C4DH68 120 aa6.27□□□□□ -1.41
CCDC58-201ENST00000291458 TNFRSF6BO95407 300 aa6.27□□□□□ -1.41
CCDC58-201ENST00000291458 SS18Q15532 418 aa6.27□□□□□ -1.41
CCDC58-201ENST00000291458 CFAP161Q6P656 301 aa6.27□□□□□ -1.41
CCDC58-201ENST00000291458 SMIM2Q9BVW6 85 aa6.27□□□□□ -1.41
CCDC58-201ENST00000291458 A0A1B0GW15 77 aa6.26□□□□□ -1.41
CCDC58-201ENST00000291458 A0A1B0GXF2 115 aa6.26□□□□□ -1.41
CCDC58-201ENST00000291458 F8W036 122 aa6.26□□□□□ -1.41
CCDC58-201ENST00000291458 PPP1R2P9O14990 202 aa6.26□□□□□ -1.41
CCDC58-201ENST00000291458 TCAPO15273 167 aa6.26□□□□□ -1.41
CCDC58-201ENST00000291458 PPP1R17O96001 155 aa6.26□□□□□ -1.41
CCDC58-201ENST00000291458 S100A8P05109 93 aa6.26□□□□□ -1.41
CCDC58-201ENST00000291458 RPL37AP61513 92 aaKnown RBP6.26□□□□□ -1.41
CCDC58-201ENST00000291458 CNBPP62633 177 aaKnown RBP6.26□□□□□ -1.41
CCDC58-201ENST00000291458 RPL39P62891 51 aaKnown RBP6.26□□□□□ -1.41
CCDC58-201ENST00000291458 SDIM1Q6ZPB5 146 aa6.26□□□□□ -1.41
CCDC58-201ENST00000291458 ZNF664Q8N3J9 261 aa6.26□□□□□ -1.41
CCDC58-201ENST00000291458 KRTAP3-1Q9BYR8 98 aa6.26□□□□□ -1.41
CCDC58-201ENST00000291458 UBE2D4Q9Y2X8 147 aa6.26□□□□□ -1.41
CCDC58-201ENST00000291458 COX6A2Q02221 97 aa6.25□□□□□ -1.41
CCDC58-201ENST00000291458 MRPL52Q86TS9 123 aaKnown RBP6.25□□□□□ -1.41
CCDC58-201ENST00000291458 CDC42SE2Q9NRR3 84 aa6.25□□□□□ -1.41
CCDC58-201ENST00000291458 GVQW2A0A096LPI5 108 aaPredicted RBP6.24□□□□□ -1.41
CCDC58-201ENST00000291458 LOC389332A0A1B0GUA5 103 aa6.24□□□□□ -1.41
CCDC58-201ENST00000291458 MALP21145 153 aa6.24□□□□□ -1.41
CCDC58-201ENST00000291458 MAJINQ3KP22 176 aa6.24□□□□□ -1.41
CCDC58-201ENST00000291458 PRSS3P2Q8NHM4 247 aa6.24□□□□□ -1.41
CCDC58-201ENST00000291458 TMEM18Q96B42 140 aa6.24□□□□□ -1.41
CCDC58-201ENST00000291458 PRELID3AQ96N28 172 aa6.24□□□□□ -1.41
CCDC58-201ENST00000291458 OPRPNQ99935 248 aaPredicted RBP6.24□□□□□ -1.41
CCDC58-201ENST00000291458 C20orf78Q9BR46 151 aa6.24□□□□□ -1.41
CCDC58-201ENST00000291458 IGHV1-58A0A0C4DH39 117 aa6.23□□□□□ -1.41
CCDC58-201ENST00000291458 LINC00862A6NCI5 91 aa6.23□□□□□ -1.41
CCDC58-201ENST00000291458 MT-ND4LP03901 98 aa6.23□□□□□ -1.41
CCDC58-201ENST00000291458 SMAGPQ0VAQ4 97 aa6.23□□□□□ -1.41
CCDC58-201ENST00000291458 PNRC1Q12796 327 aaPredicted RBP6.23□□□□□ -1.41
CCDC58-201ENST00000291458 CLLU1Q5K131 121 aa6.23□□□□□ -1.41
CCDC58-201ENST00000291458 CD164L2Q6UWJ8 174 aa6.23□□□□□ -1.41
CCDC58-201ENST00000291458 C5orf38Q86SI9 138 aa6.23□□□□□ -1.41
CCDC58-201ENST00000291458 ORMDL3Q8N138 153 aa6.23□□□□□ -1.41
CCDC58-201ENST00000291458 SPACA4Q8TDM5 124 aa6.23□□□□□ -1.41
CCDC58-201ENST00000291458 CARD19Q96LW7 228 aa6.23□□□□□ -1.41
CCDC58-201ENST00000291458 A0A087WYN8 130 aa6.22□□□□□ -1.41
CCDC58-201ENST00000291458 A0A096LNI7 61 aa6.22□□□□□ -1.41
CCDC58-201ENST00000291458 COX7A2LO14548 114 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms