RNA–Protein interactions for RNA: ENST00000289448.2

HMHB1-201, Transcript of histocompatibility minor HB-1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HMHB1, Length 384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMHB1-201ENST00000289448 PACRGQ96M98 296 aaPredicted RBP6.23□□□□□ -1.41
HMHB1-201ENST00000289448 M0QY20 66 aa6.22□□□□□ -1.41
HMHB1-201ENST00000289448 SMIM6P0DI80 62 aa6.22□□□□□ -1.41
HMHB1-201ENST00000289448 FABP4P15090 132 aa6.22□□□□□ -1.41
HMHB1-201ENST00000289448 LINC00310P59036 64 aa6.22□□□□□ -1.41
HMHB1-201ENST00000289448 AMN1Q8IY45 258 aa6.22□□□□□ -1.41
HMHB1-201ENST00000289448 ORMDL3Q8N138 153 aa6.22□□□□□ -1.41
HMHB1-201ENST00000289448 OR10D4PQ8NGN7 298 aa6.22□□□□□ -1.41
HMHB1-201ENST00000289448 AP1S3Q96PC3 154 aa6.22□□□□□ -1.41
HMHB1-201ENST00000289448 CHCHD5Q9BSY4 110 aa6.22□□□□□ -1.41
HMHB1-201ENST00000289448 LAMTOR2Q9Y2Q5 125 aa6.22□□□□□ -1.41
HMHB1-201ENST00000289448 ANGP03950 147 aaKnown RBP6.21□□□□□ -1.42
HMHB1-201ENST00000289448 IQCJQ1A5X6 159 aa6.21□□□□□ -1.42
HMHB1-201ENST00000289448 MRPL51Q4U2R6 128 aaKnown RBP6.21□□□□□ -1.42
HMHB1-201ENST00000289448 SUMO4Q6EEV6 95 aa6.21□□□□□ -1.42
HMHB1-201ENST00000289448 SCXQ7RTU7 201 aa6.21□□□□□ -1.42
HMHB1-201ENST00000289448 LINC00528Q8N1L1 170 aa6.21□□□□□ -1.42
HMHB1-201ENST00000289448 CHCHD1Q96BP2 118 aaKnown RBP6.21□□□□□ -1.42
HMHB1-201ENST00000289448 RNF185Q96GF1 192 aa6.21□□□□□ -1.42
HMHB1-201ENST00000289448 PRELID3AQ96N28 172 aa6.21□□□□□ -1.42
HMHB1-201ENST00000289448 D6R8Y8 96 aa6.2□□□□□ -1.42
HMHB1-201ENST00000289448 NUPR1O60356 82 aa6.2□□□□□ -1.42
HMHB1-201ENST00000289448 MGPP08493 103 aa6.2□□□□□ -1.42
HMHB1-201ENST00000289448 SMIM17P0DL12 118 aa6.2□□□□□ -1.42
HMHB1-201ENST00000289448 RAB4AP20338 218 aa6.2□□□□□ -1.42
HMHB1-201ENST00000289448 CKS2P33552 79 aa6.2□□□□□ -1.42
HMHB1-201ENST00000289448 RBX1P62877 108 aa6.2□□□□□ -1.42
HMHB1-201ENST00000289448 GAGE6Q13070 117 aa6.2□□□□□ -1.42
HMHB1-201ENST00000289448 KRTAP26-1Q6PEX3 210 aa6.2□□□□□ -1.42
HMHB1-201ENST00000289448 LINC00518Q8N0U6 118 aa6.2□□□□□ -1.42
HMHB1-201ENST00000289448 CHAC1Q9BUX1 264 aa6.2□□□□□ -1.42
HMHB1-201ENST00000289448 C1orf43Q9BWL3 253 aa6.2□□□□□ -1.42
HMHB1-201ENST00000289448 PRR34Q9NV39 138 aa6.2□□□□□ -1.42
HMHB1-201ENST00000289448 FAT3Q8TDW7 4589 aa6.2□□□□□ -1.42
HMHB1-201ENST00000289448 USP17L23D6RBM5 183 aa6.19□□□□□ -1.42
HMHB1-201ENST00000289448 HSBP1O75506 76 aa6.19□□□□□ -1.42
HMHB1-201ENST00000289448 CRPP02741 224 aa6.19□□□□□ -1.42
HMHB1-201ENST00000289448 PMCHP20382 165 aa6.19□□□□□ -1.42
HMHB1-201ENST00000289448 AMTP48728 403 aa6.19□□□□□ -1.42
HMHB1-201ENST00000289448 KRTAP10-4P60372 401 aaPredicted RBP6.19□□□□□ -1.42
HMHB1-201ENST00000289448 RNASEKQ6P5S7 137 aaKnown RBP6.19□□□□□ -1.42
HMHB1-201ENST00000289448 CLPSL2Q6UWE3 100 aa6.19□□□□□ -1.42
HMHB1-201ENST00000289448 LINC00269Q8N2A0 174 aa6.19□□□□□ -1.42
HMHB1-201ENST00000289448 CIRBP-AS1Q8TBR5 109 aa6.19□□□□□ -1.42
HMHB1-201ENST00000289448 DEFB104AQ8WTQ1 72 aa6.19□□□□□ -1.42
HMHB1-201ENST00000289448 MRAP2Q96G30 205 aa6.19□□□□□ -1.42
HMHB1-201ENST00000289448 DPH3P1Q9H4G8 78 aa6.19□□□□□ -1.42
HMHB1-201ENST00000289448 TRBV25-1A0A075B6N4 114 aa6.18□□□□□ -1.42
HMHB1-201ENST00000289448 PRSS1P07477 247 aa6.18□□□□□ -1.42
HMHB1-201ENST00000289448 LINC00614P0C842 121 aa6.18□□□□□ -1.42
HMHB1-201ENST00000289448 MIAQ16674 131 aa6.18□□□□□ -1.42
HMHB1-201ENST00000289448 TMEM97Q5BJF2 176 aa6.18□□□□□ -1.42
HMHB1-201ENST00000289448 FA2HQ7L5A8 372 aa6.18□□□□□ -1.42
HMHB1-201ENST00000289448 IGHV1-24A0A0C4DH33 117 aa6.17□□□□□ -1.42
HMHB1-201ENST00000289448 NCR2O95944 276 aa6.17□□□□□ -1.42
HMHB1-201ENST00000289448 PPP1R17O96001 155 aa6.17□□□□□ -1.42
HMHB1-201ENST00000289448 NPYP01303 97 aa6.17□□□□□ -1.42
HMHB1-201ENST00000289448 PLA2G1BP04054 148 aaKnown RBP6.17□□□□□ -1.42
HMHB1-201ENST00000289448 PKIAP61925 76 aa6.17□□□□□ -1.42
HMHB1-201ENST00000289448 C20orf203Q8NBC4 194 aa6.17□□□□□ -1.42
HMHB1-201ENST00000289448 PRSS3P2Q8NHM4 247 aa6.17□□□□□ -1.42
HMHB1-201ENST00000289448 URB1-AS1Q96HZ7 61 aa6.17□□□□□ -1.42
HMHB1-201ENST00000289448 C12orf57Q99622 126 aa6.17□□□□□ -1.42
HMHB1-201ENST00000289448 MAP1LC3AQ9H492 121 aa6.17□□□□□ -1.42
HMHB1-201ENST00000289448 AP5S1Q9NUS5 200 aa6.17□□□□□ -1.42
HMHB1-201ENST00000289448 IGLV4-60A0A075B6I1 120 aa6.16□□□□□ -1.42
HMHB1-201ENST00000289448 SMKR1H3BMG3 65 aa6.16□□□□□ -1.42
HMHB1-201ENST00000289448 H7C1H1 209 aa6.16□□□□□ -1.42
HMHB1-201ENST00000289448 TNFRSF6BO95407 300 aa6.16□□□□□ -1.42
HMHB1-201ENST00000289448 JOSD1Q15040 202 aaPredicted RBP6.16□□□□□ -1.42
HMHB1-201ENST00000289448 C14orf177Q52M58 125 aa6.16□□□□□ -1.42
HMHB1-201ENST00000289448 PYY3Q5JQD4 70 aa6.16□□□□□ -1.42
HMHB1-201ENST00000289448 NXT2Q9NPJ8 142 aaKnown RBP6.16□□□□□ -1.42
HMHB1-201ENST00000289448 PKHD1L1Q86WI1 4243 aa6.16□□□□□ -1.42
HMHB1-201ENST00000289448 HMCN2Q8NDA2 5059 aa6.15□□□□□ -1.42
HMHB1-201ENST00000289448 IGLV10-54A0A075B6I4 117 aa6.15□□□□□ -1.42
HMHB1-201ENST00000289448 TRAV26-2A0A0B4J265 109 aa6.15□□□□□ -1.42
HMHB1-201ENST00000289448 PRSS47A8MTI9 375 aa6.15□□□□□ -1.42
HMHB1-201ENST00000289448 IFI27P40305 119 aaPredicted RBP6.15□□□□□ -1.42
HMHB1-201ENST00000289448 REG3AQ06141 175 aa6.15□□□□□ -1.42
HMHB1-201ENST00000289448 FAM19A2Q8N3H0 131 aa6.15□□□□□ -1.42
HMHB1-201ENST00000289448 NRACQ8N912 160 aa6.15□□□□□ -1.42
HMHB1-201ENST00000289448 C20orf78Q9BR46 151 aa6.15□□□□□ -1.42
HMHB1-201ENST00000289448 TMEM243Q9BU79 118 aa6.15□□□□□ -1.42
HMHB1-201ENST00000289448 NIT2Q9NQR4 276 aa6.15□□□□□ -1.42
HMHB1-201ENST00000289448 LOC389332A0A1B0GUA5 103 aa6.14□□□□□ -1.43
HMHB1-201ENST00000289448 A0A1B0GUV1 79 aa6.14□□□□□ -1.43
HMHB1-201ENST00000289448 LINC01546A6NGU7 62 aa6.14□□□□□ -1.43
HMHB1-201ENST00000289448 PANO1I0J062 215 aa6.14□□□□□ -1.43
HMHB1-201ENST00000289448 GAS8-AS1O95177 125 aa6.14□□□□□ -1.43
HMHB1-201ENST00000289448 Q8N8P6 123 aa6.14□□□□□ -1.43
HMHB1-201ENST00000289448 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.14□□□□□ -1.43
HMHB1-201ENST00000289448 KRTAP29-1A8MX34 341 aaPredicted RBP6.13□□□□□ -1.43
HMHB1-201ENST00000289448 J3QL48 77 aa6.13□□□□□ -1.43
HMHB1-201ENST00000289448 SLPIP03973 132 aa6.13□□□□□ -1.43
HMHB1-201ENST00000289448 SUMO2P61956 95 aaKnown RBP6.13□□□□□ -1.43
HMHB1-201ENST00000289448 RPL32P62910 135 aaKnown RBP6.13□□□□□ -1.43
HMHB1-201ENST00000289448 DGAT2L7PQ6IED9 249 aa6.13□□□□□ -1.43
HMHB1-201ENST00000289448 SDIM1Q6ZPB5 146 aa6.13□□□□□ -1.43
HMHB1-201ENST00000289448 C9orf163Q8N9P6 203 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms