RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 SMIM15Q7Z3B0 74 aa5.99□□□□□ -1.45
HMGN1-201ENST00000288344 BAALCQ8WXS3 180 aa5.99□□□□□ -1.45
HMGN1-201ENST00000288344 URGCP-MRPS24S4R325 110 aa5.99□□□□□ -1.45
HMGN1-201ENST00000288344 SRRM2Q9UQ35 2752 aaKnown RBP5.98□□□□□ -1.45
HMGN1-201ENST00000288344 PPP1R2P9O14990 202 aa5.98□□□□□ -1.45
HMGN1-201ENST00000288344 ANGP03950 147 aaKnown RBP5.98□□□□□ -1.45
HMGN1-201ENST00000288344 KCNIP4Q6PIL6 250 aa5.98□□□□□ -1.45
HMGN1-201ENST00000288344 Q6ZSA8 131 aa5.98□□□□□ -1.45
HMGN1-201ENST00000288344 ATP5L2Q7Z4Y8 100 aa5.98□□□□□ -1.45
HMGN1-201ENST00000288344 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.98□□□□□ -1.45
HMGN1-201ENST00000288344 BORCS7Q96B45 105 aa5.98□□□□□ -1.45
HMGN1-201ENST00000288344 SEC11CQ9BY50 192 aa5.98□□□□□ -1.45
HMGN1-201ENST00000288344 ST20Q9HBF5 79 aa5.98□□□□□ -1.45
HMGN1-201ENST00000288344 VCYO14598 125 aa5.97□□□□□ -1.45
HMGN1-201ENST00000288344 AMTP48728 403 aa5.97□□□□□ -1.45
HMGN1-201ENST00000288344 CAMPP49913 170 aa5.97□□□□□ -1.45
HMGN1-201ENST00000288344 SUMO2P61956 95 aaKnown RBP5.97□□□□□ -1.45
HMGN1-201ENST00000288344 HBBP68871 147 aa5.97□□□□□ -1.45
HMGN1-201ENST00000288344 REG3AQ06141 175 aa5.97□□□□□ -1.45
HMGN1-201ENST00000288344 MRPL52Q86TS9 123 aaKnown RBP5.97□□□□□ -1.45
HMGN1-201ENST00000288344 IMMP2LQ96T52 175 aa5.97□□□□□ -1.45
HMGN1-201ENST00000288344 C20orf78Q9BR46 151 aa5.97□□□□□ -1.45
HMGN1-201ENST00000288344 IGKV2D-24A0A075B6R9 120 aa5.96□□□□□ -1.46
HMGN1-201ENST00000288344 TRAV8-4A0A0B4J246 113 aa5.96□□□□□ -1.46
HMGN1-201ENST00000288344 GAGE12HA6NDE8 117 aa5.96□□□□□ -1.46
HMGN1-201ENST00000288344 LECT2O14960 151 aa5.96□□□□□ -1.46
HMGN1-201ENST00000288344 PSCAO43653 123 aa5.96□□□□□ -1.46
HMGN1-201ENST00000288344 MT-ND4LP03901 98 aa5.96□□□□□ -1.46
HMGN1-201ENST00000288344 SLPIP03973 132 aa5.96□□□□□ -1.46
HMGN1-201ENST00000288344 FGF6P10767 208 aa5.96□□□□□ -1.46
HMGN1-201ENST00000288344 MRPL54Q6P161 138 aaKnown RBP5.96□□□□□ -1.46
HMGN1-201ENST00000288344 RMI2Q96E14 147 aa5.96□□□□□ -1.46
HMGN1-201ENST00000288344 CDC42SE2Q9NRR3 84 aa5.96□□□□□ -1.46
HMGN1-201ENST00000288344 TMEM242Q9NWH2 141 aa5.96□□□□□ -1.46
HMGN1-201ENST00000288344 CARHSP1Q9Y2V2 147 aaKnown RBP5.96□□□□□ -1.46
HMGN1-201ENST00000288344 CSDC2Q9Y534 153 aaKnown RBP5.96□□□□□ -1.46
HMGN1-201ENST00000288344 MYCBP2O75592 4640 aa5.95□□□□□ -1.46
HMGN1-201ENST00000288344 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.95□□□□□ -1.46
HMGN1-201ENST00000288344 IGKV2-29A2NJV5 120 aaPredicted RBP5.95□□□□□ -1.46
HMGN1-201ENST00000288344 PHOX2AO14813 284 aa5.95□□□□□ -1.46
HMGN1-201ENST00000288344 TRIAP1O43715 76 aa5.95□□□□□ -1.46
HMGN1-201ENST00000288344 PPP1R17O96001 155 aa5.95□□□□□ -1.46
HMGN1-201ENST00000288344 NPYP01303 97 aa5.95□□□□□ -1.46
HMGN1-201ENST00000288344 PRSS1P07477 247 aa5.95□□□□□ -1.46
HMGN1-201ENST00000288344 PMCHP20382 165 aa5.95□□□□□ -1.46
HMGN1-201ENST00000288344 IGLV5-52A0A0A0MRZ9 124 aa5.94□□□□□ -1.46
HMGN1-201ENST00000288344 D6R8Y8 96 aa5.94□□□□□ -1.46
HMGN1-201ENST00000288344 F8W036 122 aa5.94□□□□□ -1.46
HMGN1-201ENST00000288344 PPBPP02775 128 aa5.94□□□□□ -1.46
HMGN1-201ENST00000288344 ZNF25P17030 456 aaPredicted RBP5.94□□□□□ -1.46
HMGN1-201ENST00000288344 COMMD7Q86VX2 200 aa5.94□□□□□ -1.46
HMGN1-201ENST00000288344 Q8N1X5 172 aa5.94□□□□□ -1.46
HMGN1-201ENST00000288344 KRTAP4-2Q9BYR5 136 aa5.94□□□□□ -1.46
HMGN1-201ENST00000288344 CTDSP1Q9GZU7 261 aa5.94□□□□□ -1.46
HMGN1-201ENST00000288344 PKHD1L1Q86WI1 4243 aa5.93□□□□□ -1.46
HMGN1-201ENST00000288344 APCSP02743 223 aa5.93□□□□□ -1.46
HMGN1-201ENST00000288344 S100A8P05109 93 aa5.93□□□□□ -1.46
HMGN1-201ENST00000288344 CKS2P33552 79 aa5.93□□□□□ -1.46
HMGN1-201ENST00000288344 CLPSL2Q6UWE3 100 aa5.93□□□□□ -1.46
HMGN1-201ENST00000288344 TMEM136Q6ZRR5 245 aa5.93□□□□□ -1.46
HMGN1-201ENST00000288344 OR5A1Q8NGJ0 315 aa5.93□□□□□ -1.46
HMGN1-201ENST00000288344 BTF3L4Q96K17 158 aa5.93□□□□□ -1.46
HMGN1-201ENST00000288344 TIMM21Q9BVV7 248 aa5.93□□□□□ -1.46
HMGN1-201ENST00000288344 KRTAP3-1Q9BYR8 98 aa5.93□□□□□ -1.46
HMGN1-201ENST00000288344 UBE2D4Q9Y2X8 147 aa5.93□□□□□ -1.46
HMGN1-201ENST00000288344 IGLV10-54A0A075B6I4 117 aa5.92□□□□□ -1.46
HMGN1-201ENST00000288344 C7orf77A4D0Y5 90 aa5.92□□□□□ -1.46
HMGN1-201ENST00000288344 USP17L23D6RBM5 183 aa5.92□□□□□ -1.46
HMGN1-201ENST00000288344 FOXI1Q12951 378 aa5.92□□□□□ -1.46
HMGN1-201ENST00000288344 DGAT2L7PQ6IED9 249 aa5.92□□□□□ -1.46
HMGN1-201ENST00000288344 SMIM2Q9BVW6 85 aa5.92□□□□□ -1.46
HMGN1-201ENST00000288344 LRP1Q07954 4544 aaKnown RBP5.91□□□□□ -1.46
HMGN1-201ENST00000288344 TRAV9-1A0A075B6T8 112 aa5.91□□□□□ -1.46
HMGN1-201ENST00000288344 LINC00959A0A1B0GUT2 108 aa5.91□□□□□ -1.46
HMGN1-201ENST00000288344 CRPP02741 224 aa5.91□□□□□ -1.46
HMGN1-201ENST00000288344 LINC01620Q4KN68 170 aa5.91□□□□□ -1.46
HMGN1-201ENST00000288344 SDIM1Q6ZPB5 146 aa5.91□□□□□ -1.46
HMGN1-201ENST00000288344 ORMDL3Q8N138 153 aa5.91□□□□□ -1.46
HMGN1-201ENST00000288344 ZNF664Q8N3J9 261 aa5.91□□□□□ -1.46
HMGN1-201ENST00000288344 C15orf56Q8N910 161 aa5.91□□□□□ -1.46
HMGN1-201ENST00000288344 C9orf163Q8N9P6 203 aa5.91□□□□□ -1.46
HMGN1-201ENST00000288344 FAT3Q8TDW7 4589 aa5.9□□□□□ -1.46
HMGN1-201ENST00000288344 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.9□□□□□ -1.47
HMGN1-201ENST00000288344 UBE2L6O14933 153 aa5.9□□□□□ -1.47
HMGN1-201ENST00000288344 CNBPP62633 177 aaKnown RBP5.9□□□□□ -1.47
HMGN1-201ENST00000288344 CHCHD10Q8WYQ3 142 aaPredicted RBP5.9□□□□□ -1.47
HMGN1-201ENST00000288344 PRELID3AQ96N28 172 aa5.9□□□□□ -1.47
HMGN1-201ENST00000288344 YPEL4Q96NS1 127 aa5.9□□□□□ -1.47
HMGN1-201ENST00000288344 LAMTOR2Q9Y2Q5 125 aa5.9□□□□□ -1.47
HMGN1-201ENST00000288344 LINC01546A6NGU7 62 aa5.89□□□□□ -1.47
HMGN1-201ENST00000288344 KRTAP10-4P60372 401 aaPredicted RBP5.89□□□□□ -1.47
HMGN1-201ENST00000288344 RPL39P62891 51 aaKnown RBP5.89□□□□□ -1.47
HMGN1-201ENST00000288344 HERC1Q15751 4861 aa5.89□□□□□ -1.47
HMGN1-201ENST00000288344 RNASEKQ6P5S7 137 aaKnown RBP5.89□□□□□ -1.47
HMGN1-201ENST00000288344 KIR2DL4Q99706 377 aa5.89□□□□□ -1.47
HMGN1-201ENST00000288344 PYGO1Q9Y3Y4 419 aa5.89□□□□□ -1.47
HMGN1-201ENST00000288344 PANO1I0J062 215 aa5.88□□□□□ -1.47
HMGN1-201ENST00000288344 TCAPO15273 167 aa5.88□□□□□ -1.47
HMGN1-201ENST00000288344 HLA-DQA1P01909 254 aa5.88□□□□□ -1.47
HMGN1-201ENST00000288344 MRPS36P82909 103 aaKnown RBP5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms