RNA–Protein interactions for RNA: ENST00000275560.3

SSC4D-201, Transcript of scavenger receptor cysteine rich family member with 4 domains, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSC4D, Length 2,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSC4D-201ENST00000275560 IGHV3OR16-12A0A075B7B8 117 aa13.47□□□□□ -0.25
SSC4D-201ENST00000275560 CFAP46Q8IYW2 2715 aa13.47□□□□□ -0.25
SSC4D-201ENST00000275560 FAM240AA0A1B0GVK7 77 aa13.47□□□□□ -0.25
SSC4D-201ENST00000275560 DGAT2L7PQ6IED9 249 aa13.47□□□□□ -0.25
SSC4D-201ENST00000275560 NIPBLQ6KC79 2804 aaeCLIP13.47□□□□□ -0.25
SSC4D-201ENST00000275560 LINC00694P0DN24 101 aa13.46□□□□□ -0.25
SSC4D-201ENST00000275560 CHD6Q8TD26 2715 aa13.46□□□□□ -0.25
SSC4D-201ENST00000275560 ATP5J2P56134 94 aa13.46□□□□□ -0.25
SSC4D-201ENST00000275560 CCL19Q99731 98 aa13.46□□□□□ -0.25
SSC4D-201ENST00000275560 USP9XQ93008 2570 aaPredicted RBP13.46□□□□□ -0.26
SSC4D-201ENST00000275560 WNK1Q9H4A3 2382 aa13.45□□□□□ -0.26
SSC4D-201ENST00000275560 SLURP1P55000 103 aa13.45□□□□□ -0.26
SSC4D-201ENST00000275560 TRAV13-1A0A0B4J241 112 aa13.45□□□□□ -0.26
SSC4D-201ENST00000275560 NBPF19A0A087WUL8 3843 aa13.45□□□□□ -0.26
SSC4D-201ENST00000275560 TRBV7-7A0A0K0K1E9 115 aa13.45□□□□□ -0.26
SSC4D-201ENST00000275560 DAZ2Q13117 558 aaKnown RBP13.45□□□□□ -0.26
SSC4D-201ENST00000275560 MRPL23Q16540 153 aaKnown RBP13.45□□□□□ -0.26
SSC4D-201ENST00000275560 DAZ4Q86SG3 579 aaKnown RBP13.45□□□□□ -0.26
SSC4D-201ENST00000275560 MAPK1IP1LQ8NDC0 245 aa13.45□□□□□ -0.26
SSC4D-201ENST00000275560 EDA2RQ9HAV5 297 aa13.45□□□□□ -0.26
SSC4D-201ENST00000275560 DAZ3Q9NR90 486 aaKnown RBP13.45□□□□□ -0.26
SSC4D-201ENST00000275560 NRGNQ92686 78 aa13.44□□□□□ -0.26
SSC4D-201ENST00000275560 FAM218AQ96MZ4 157 aa13.44□□□□□ -0.26
SSC4D-201ENST00000275560 TIMM17BO60830 172 aa13.44□□□□□ -0.26
SSC4D-201ENST00000275560 GNLYP22749 145 aa13.44□□□□□ -0.26
SSC4D-201ENST00000275560 LINC00242Q5T6M2 205 aa13.44□□□□□ -0.26
SSC4D-201ENST00000275560 LINC01587Q99440 93 aa13.44□□□□□ -0.26
SSC4D-201ENST00000275560 COX7A2LO14548 114 aa13.43□□□□□ -0.26
SSC4D-201ENST00000275560 CIRBPQ14011 172 aaKnown RBP13.43□□□□□ -0.26
SSC4D-201ENST00000275560 PIK3CD-AS1Q5SR53 167 aa13.43□□□□□ -0.26
SSC4D-201ENST00000275560 FAM110AQ9BQ89 295 aa13.43□□□□□ -0.26
SSC4D-201ENST00000275560 Q9HAA7 133 aa13.42□□□□□ -0.26
SSC4D-201ENST00000275560 ZNF415Q09FC8 603 aa13.41□□□□□ -0.26
SSC4D-201ENST00000275560 IGLV5-45A0A087WSX0 123 aa13.4□□□□□ -0.26
SSC4D-201ENST00000275560 IGHV3-53P01767 116 aa13.4□□□□□ -0.26
SSC4D-201ENST00000275560 PRIMA1Q86XR5 153 aa13.4□□□□□ -0.26
SSC4D-201ENST00000275560 C22orf24Q9Y442 160 aa13.4□□□□□ -0.26
SSC4D-201ENST00000275560 C11orf72Q8NBR9 251 aa13.4□□□□□ -0.26
SSC4D-201ENST00000275560 SMIM1B2RUZ4 78 aa13.4□□□□□ -0.27
SSC4D-201ENST00000275560 BAALC-AS2P0C853 105 aa13.4□□□□□ -0.27
SSC4D-201ENST00000275560 TIRAPP58753 221 aa13.4□□□□□ -0.27
SSC4D-201ENST00000275560 JMJD1CQ15652 2540 aa13.39□□□□□ -0.27
SSC4D-201ENST00000275560 IGLV5-39A0A0G2JS06 123 aa13.39□□□□□ -0.27
SSC4D-201ENST00000275560 UCNP55089 124 aa13.38□□□□□ -0.27
SSC4D-201ENST00000275560 RNF152Q8N8N0 203 aa13.38□□□□□ -0.27
SSC4D-201ENST00000275560 BEAN1Q3B7T3 259 aa13.38□□□□□ -0.27
SSC4D-201ENST00000275560 TMEM89A2RUT3 159 aa13.37□□□□□ -0.27
SSC4D-201ENST00000275560 ANKRD17O75179 2603 aaKnown RBP13.37□□□□□ -0.27
SSC4D-201ENST00000275560 RS1O15537 224 aa13.37□□□□□ -0.27
SSC4D-201ENST00000275560 XCL2Q9UBD3 114 aa13.37□□□□□ -0.27
SSC4D-201ENST00000275560 TEX15Q9BXT5 2789 aa13.37□□□□□ -0.27
SSC4D-201ENST00000275560 SETD2Q9BYW2 2564 aaPredicted RBP13.36□□□□□ -0.27
SSC4D-201ENST00000275560 TLN2Q9Y4G6 2542 aa13.36□□□□□ -0.27
SSC4D-201ENST00000275560 NF1P21359 2839 aa13.36□□□□□ -0.27
SSC4D-201ENST00000275560 HERVK_113P63121 156 aa13.35□□□□□ -0.27
SSC4D-201ENST00000275560 GAGE2AQ6NT46 116 aa13.35□□□□□ -0.27
SSC4D-201ENST00000275560 UBE2E2Q96LR5 201 aa13.35□□□□□ -0.27
SSC4D-201ENST00000275560 EPG5Q9HCE0 2579 aa13.35□□□□□ -0.27
SSC4D-201ENST00000275560 NTM-AS1Q6ZSK4 140 aa13.35□□□□□ -0.27
SSC4D-201ENST00000275560 Q96MF0 132 aa13.35□□□□□ -0.27
SSC4D-201ENST00000275560 KLK5Q9Y337 293 aaPredicted RBP13.35□□□□□ -0.27
SSC4D-201ENST00000275560 B4DSR2 109 aa13.34□□□□□ -0.27
SSC4D-201ENST00000275560 C9orf129Q5T035 196 aaKnown RBP13.34□□□□□ -0.27
SSC4D-201ENST00000275560 PPDPFQ9H3Y8 114 aa13.34□□□□□ -0.27
SSC4D-201ENST00000275560 MAP6D1Q9H9H5 199 aa13.33□□□□□ -0.28
SSC4D-201ENST00000275560 MYO18BQ8IUG5 2567 aa13.33□□□□□ -0.28
SSC4D-201ENST00000275560 TRGV1A0A0A0MS02 117 aa13.33□□□□□ -0.28
SSC4D-201ENST00000275560 C9orf153Q5TBE3 101 aa13.32□□□□□ -0.28
SSC4D-201ENST00000275560 DNAJC30Q96LL9 226 aa13.32□□□□□ -0.28
SSC4D-201ENST00000275560 ACYP1P07311 99 aa13.32□□□□□ -0.28
SSC4D-201ENST00000275560 KHDC1LQ5JSQ8 128 aa13.32□□□□□ -0.28
SSC4D-201ENST00000275560 LINC00643Q86TS7 51 aa13.32□□□□□ -0.28
SSC4D-201ENST00000275560 IGKV3OR2-268A0A0C4DH90 116 aa13.31□□□□□ -0.28
SSC4D-201ENST00000275560 F5H768 121 aa13.31□□□□□ -0.28
SSC4D-201ENST00000275560 ZNF702PQ9H963 129 aa13.31□□□□□ -0.28
SSC4D-201ENST00000275560 TRACP01848 142 aa13.3□□□□□ -0.28
SSC4D-201ENST00000275560 LINC00337Q8N6G1 96 aa13.3□□□□□ -0.28
SSC4D-201ENST00000275560 PKD1L2Q7Z442 2459 aa13.29□□□□□ -0.28
SSC4D-201ENST00000275560 A8MTW9 85 aa13.29□□□□□ -0.28
SSC4D-201ENST00000275560 TOMM7Q9P0U1 55 aa13.29□□□□□ -0.28
SSC4D-201ENST00000275560 SETXQ7Z333 2677 aaKnown RBP13.28□□□□□ -0.28
SSC4D-201ENST00000275560 DOPEY1Q5JWR5 2465 aa13.28□□□□□ -0.28
SSC4D-201ENST00000275560 INSP01308 110 aa13.28□□□□□ -0.28
SSC4D-201ENST00000275560 Q6ZTI0 123 aa13.28□□□□□ -0.28
SSC4D-201ENST00000275560 C3orf22Q8N5N4 141 aa13.28□□□□□ -0.28
SSC4D-201ENST00000275560 IMUPQ9GZP8 106 aa13.28□□□□□ -0.28
SSC4D-201ENST00000275560 VPREB3Q9UKI3 123 aa13.28□□□□□ -0.28
SSC4D-201ENST00000275560 ZNF469Q96JG9 3925 aaPredicted RBP13.28□□□□□ -0.28
SSC4D-201ENST00000275560 A0A087WYN8 130 aa13.28□□□□□ -0.28
SSC4D-201ENST00000275560 PTPN13Q12923 2485 aa13.27□□□□□ -0.28
SSC4D-201ENST00000275560 LOC107984640A0A0U1RRK4 108 aa13.27□□□□□ -0.29
SSC4D-201ENST00000275560 MIR7-3HGQ8N6C7 128 aa13.27□□□□□ -0.29
SSC4D-201ENST00000275560 TMEM126AQ9H061 195 aa13.27□□□□□ -0.29
SSC4D-201ENST00000275560 CDC42SE2Q9NRR3 84 aa13.27□□□□□ -0.29
SSC4D-201ENST00000275560 SDIM1Q6ZPB5 146 aa13.26□□□□□ -0.29
SSC4D-201ENST00000275560 SONP18583 2426 aaKnown RBP13.26□□□□□ -0.29
SSC4D-201ENST00000275560 IGKV2-28A0A075B6P5 120 aa13.26□□□□□ -0.29
SSC4D-201ENST00000275560 IGKV2D-28P01615 120 aa13.26□□□□□ -0.29
SSC4D-201ENST00000275560 ATP5G1P05496 136 aa13.26□□□□□ -0.29
SSC4D-201ENST00000275560 MALP21145 153 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms