RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 DEFB4AO15263 64 aa10.77□□□□□ -0.68
COPS3-201ENST00000268717 BOD1L2Q8IYS8 172 aa10.77□□□□□ -0.68
COPS3-201ENST00000268717 FAM104AQ969W3 186 aa10.77□□□□□ -0.68
COPS3-201ENST00000268717 LOC100131303A0A0U1RQF7 123 aa10.76□□□□□ -0.69
COPS3-201ENST00000268717 FGF6P10767 208 aa10.76□□□□□ -0.69
COPS3-201ENST00000268717 CELA1Q9UNI1 258 aa10.76□□□□□ -0.69
COPS3-201ENST00000268717 TRBV25-1A0A075B6N4 114 aa10.76□□□□□ -0.69
COPS3-201ENST00000268717 LBHQ53QV2 105 aaPredicted RBP10.76□□□□□ -0.69
COPS3-201ENST00000268717 WWC2-AS2Q96NR7 200 aa10.76□□□□□ -0.69
COPS3-201ENST00000268717 TM2D3Q9BRN9 247 aa10.76□□□□□ -0.69
COPS3-201ENST00000268717 TMEM243Q9BU79 118 aa10.76□□□□□ -0.69
COPS3-201ENST00000268717 C11orf86A6NJI1 115 aa10.75□□□□□ -0.69
COPS3-201ENST00000268717 SIVA1O15304 175 aa10.75□□□□□ -0.69
COPS3-201ENST00000268717 GYPEP15421 78 aa10.75□□□□□ -0.69
COPS3-201ENST00000268717 OPRPNQ99935 248 aaPredicted RBP10.75□□□□□ -0.69
COPS3-201ENST00000268717 TRBV6-8A0A0A6YYG3 113 aa10.74□□□□□ -0.69
COPS3-201ENST00000268717 PAX4O43316 350 aa10.74□□□□□ -0.69
COPS3-201ENST00000268717 C2orf88Q9BSF0 95 aa10.74□□□□□ -0.69
COPS3-201ENST00000268717 TRAV26-1A0A087WT03 109 aa10.73□□□□□ -0.69
COPS3-201ENST00000268717 E9PLD3 99 aa10.73□□□□□ -0.69
COPS3-201ENST00000268717 M0R143 59 aa10.73□□□□□ -0.69
COPS3-201ENST00000268717 ZNF25P17030 456 aaPredicted RBP10.73□□□□□ -0.69
COPS3-201ENST00000268717 NMUP48645 174 aa10.73□□□□□ -0.69
COPS3-201ENST00000268717 HERVK_113P61574 105 aa10.73□□□□□ -0.69
COPS3-201ENST00000268717 CTAG1AP78358 180 aa10.73□□□□□ -0.69
COPS3-201ENST00000268717 ATP6V0E2Q8NHE4 81 aa10.73□□□□□ -0.69
COPS3-201ENST00000268717 UBE2L6O14933 153 aa10.73□□□□□ -0.69
COPS3-201ENST00000268717 DGAT2L7PQ6IED9 249 aa10.73□□□□□ -0.69
COPS3-201ENST00000268717 Q6ZUT4 128 aa10.73□□□□□ -0.69
COPS3-201ENST00000268717 RETNQ9HD89 108 aa10.73□□□□□ -0.69
COPS3-201ENST00000268717 IGKV2D-26A0A0A0MRZ7 120 aa10.72□□□□□ -0.69
COPS3-201ENST00000268717 CEMP1Q6PRD7 247 aaPredicted RBP10.72□□□□□ -0.69
COPS3-201ENST00000268717 SPATA25Q9BR10 227 aa10.72□□□□□ -0.69
COPS3-201ENST00000268717 CHAC1Q9BUX1 264 aa10.72□□□□□ -0.69
COPS3-201ENST00000268717 TINCRA0A1B0GVN0 87 aa10.71□□□□□ -0.69
COPS3-201ENST00000268717 SH2D6Q7Z4S9 175 aa10.71□□□□□ -0.69
COPS3-201ENST00000268717 FAM19A3Q7Z5A8 133 aa10.71□□□□□ -0.69
COPS3-201ENST00000268717 VSIG2Q96IQ7 327 aa10.71□□□□□ -0.69
COPS3-201ENST00000268717 C2orf91Q6ZV80 131 aa10.7□□□□□ -0.7
COPS3-201ENST00000268717 PCP2Q8IVA1 136 aa10.7□□□□□ -0.7
COPS3-201ENST00000268717 OR5A1Q8NGJ0 315 aa10.7□□□□□ -0.7
COPS3-201ENST00000268717 TMEM101Q96IK0 257 aa10.7□□□□□ -0.7
COPS3-201ENST00000268717 SNHG12Q9BXW3 62 aa10.7□□□□□ -0.7
COPS3-201ENST00000268717 UBE2D1P51668 147 aa10.69□□□□□ -0.7
COPS3-201ENST00000268717 C12orf74Q32Q52 190 aa10.69□□□□□ -0.7
COPS3-201ENST00000268717 AMMECR1LQ6DCA0 310 aa10.69□□□□□ -0.7
COPS3-201ENST00000268717 CDC42SE2Q9NRR3 84 aa10.69□□□□□ -0.7
COPS3-201ENST00000268717 HIGD1BQ9P298 99 aa10.69□□□□□ -0.7
COPS3-201ENST00000268717 F5H768 121 aa10.69□□□□□ -0.7
COPS3-201ENST00000268717 ZNF22P17026 224 aaPredicted RBP10.69□□□□□ -0.7
COPS3-201ENST00000268717 A0A0J9YXV3 536 aa10.68□□□□□ -0.7
COPS3-201ENST00000268717 H3BNG1 76 aa10.68□□□□□ -0.7
COPS3-201ENST00000268717 EREGO14944 169 aa10.68□□□□□ -0.7
COPS3-201ENST00000268717 TIRAPP58753 221 aa10.68□□□□□ -0.7
COPS3-201ENST00000268717 SEC11AP67812 179 aa10.68□□□□□ -0.7
COPS3-201ENST00000268717 MRPL23Q16540 153 aaKnown RBP10.68□□□□□ -0.7
COPS3-201ENST00000268717 TMEM170BQ5T4T1 132 aa10.68□□□□□ -0.7
COPS3-201ENST00000268717 TMEM223A0PJW6 202 aa10.67□□□□□ -0.7
COPS3-201ENST00000268717 TP73-AS1Q9UF72 201 aa10.67□□□□□ -0.7
COPS3-201ENST00000268717 KMT2CQ8NEZ4 4911 aaKnown RBP10.67□□□□□ -0.7
COPS3-201ENST00000268717 CSMD3Q7Z407 3707 aa10.67□□□□□ -0.7
COPS3-201ENST00000268717 IGLV5-45A0A087WSX0 123 aa10.66□□□□□ -0.7
COPS3-201ENST00000268717 TCTAP57738 103 aa10.66□□□□□ -0.7
COPS3-201ENST00000268717 ICOSQ9Y6W8 199 aa10.66□□□□□ -0.7
COPS3-201ENST00000268717 RNASE13Q5GAN3 156 aaKnown RBP10.66□□□□□ -0.7
COPS3-201ENST00000268717 CHCHD5Q9BSY4 110 aa10.66□□□□□ -0.7
COPS3-201ENST00000268717 TRAV8-6A0A0B4J262 113 aa10.65□□□□□ -0.7
COPS3-201ENST00000268717 A0A0J9YY99 117 aa10.65□□□□□ -0.7
COPS3-201ENST00000268717 A0A1B0GUV1 79 aa10.65□□□□□ -0.7
COPS3-201ENST00000268717 HERVK_113P63121 156 aa10.65□□□□□ -0.7
COPS3-201ENST00000268717 MYMXA0A1B0GTQ4 84 aa10.64□□□□□ -0.71
COPS3-201ENST00000268717 LEPROTO15243 131 aa10.64□□□□□ -0.71
COPS3-201ENST00000268717 GAGE6Q13070 117 aa10.64□□□□□ -0.71
COPS3-201ENST00000268717 A0A0J9YWU9 116 aa10.63□□□□□ -0.71
COPS3-201ENST00000268717 HSD52Q0P140 79 aa10.63□□□□□ -0.71
COPS3-201ENST00000268717 MUC7Q8TAX7 377 aa10.63□□□□□ -0.71
COPS3-201ENST00000268717 PLEKHB2Q96CS7 222 aa10.63□□□□□ -0.71
COPS3-201ENST00000268717 GEMIN7Q9H840 131 aaKnown RBP10.63□□□□□ -0.71
COPS3-201ENST00000268717 STARD9Q9P2P6 4700 aa10.63□□□□□ -0.71
COPS3-201ENST00000268717 C3orf84H3BNL1 204 aa10.62□□□□□ -0.71
COPS3-201ENST00000268717 H3BRM9 83 aa10.62□□□□□ -0.71
COPS3-201ENST00000268717 HTN3P15516 51 aa10.62□□□□□ -0.71
COPS3-201ENST00000268717 MAPKAPK5-AS1Q8N8E1 139 aa10.62□□□□□ -0.71
COPS3-201ENST00000268717 TTTY13Q9BZ97 58 aa10.62□□□□□ -0.71
COPS3-201ENST00000268717 J3QQQ9 107 aa10.62□□□□□ -0.71
COPS3-201ENST00000268717 MPV17L2Q567V2 206 aa10.62□□□□□ -0.71
COPS3-201ENST00000268717 LINC00242Q5T6M2 205 aa10.62□□□□□ -0.71
COPS3-201ENST00000268717 A0A096LPF7 62 aa10.61□□□□□ -0.71
COPS3-201ENST00000268717 HINT1P49773 126 aaPredicted RBP10.61□□□□□ -0.71
COPS3-201ENST00000268717 COL5A1-AS1Q5SY13 56 aa10.61□□□□□ -0.71
COPS3-201ENST00000268717 BVES-AS1Q5T3Y7 98 aa10.61□□□□□ -0.71
COPS3-201ENST00000268717 LELP1Q5T871 98 aa10.61□□□□□ -0.71
COPS3-201ENST00000268717 Q6ZTC4 211 aa10.61□□□□□ -0.71
COPS3-201ENST00000268717 LINC00469Q8N7U9 141 aa10.61□□□□□ -0.71
COPS3-201ENST00000268717 C11orf45Q8TAV5 145 aa10.61□□□□□ -0.71
COPS3-201ENST00000268717 IGHV1-58A0A0C4DH39 117 aa10.6□□□□□ -0.71
COPS3-201ENST00000268717 ZNF815PA8K554 130 aa10.6□□□□□ -0.71
COPS3-201ENST00000268717 TAL2Q16559 108 aa10.6□□□□□ -0.71
COPS3-201ENST00000268717 IGLV4-60A0A075B6I1 120 aa10.59□□□□□ -0.71
COPS3-201ENST00000268717 LGALS3P17931 250 aaKnown RBP10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 160.6 ms