RNA–Protein interactions for RNA: ENST00000267484.9

RTN1-201, Transcript of reticulon 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RTN1, Length 3,435 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-201ENST00000267484 C11orf72Q8NBR9 251 aa12.2□□□□□ -0.46
RTN1-201ENST00000267484 TMEM101Q96IK0 257 aa12.2□□□□□ -0.46
RTN1-201ENST00000267484 SPANXA1Q9NS26 97 aa12.2□□□□□ -0.46
RTN1-201ENST00000267484 DGAT2L7PQ6IED9 249 aa12.2□□□□□ -0.46
RTN1-201ENST00000267484 MAP6D1Q9H9H5 199 aa12.2□□□□□ -0.46
RTN1-201ENST00000267484 ZNF469Q96JG9 3925 aaPredicted RBP12.2□□□□□ -0.46
RTN1-201ENST00000267484 IGHV3-53P01767 116 aa12.2□□□□□ -0.46
RTN1-201ENST00000267484 RNF152Q8N8N0 203 aa12.2□□□□□ -0.46
RTN1-201ENST00000267484 LINC00694P0DN24 101 aa12.19□□□□□ -0.46
RTN1-201ENST00000267484 EDA2RQ9HAV5 297 aa12.19□□□□□ -0.46
RTN1-201ENST00000267484 ZNF462Q96JM2 2506 aa12.19□□□□□ -0.46
RTN1-201ENST00000267484 GAGE2BQ13066 116 aa12.18□□□□□ -0.46
RTN1-201ENST00000267484 GAGE2EQ4V326 116 aa12.18□□□□□ -0.46
RTN1-201ENST00000267484 TTC32Q5I0X7 151 aa12.18□□□□□ -0.46
RTN1-201ENST00000267484 GAGE2DQ9UEU5 116 aa12.18□□□□□ -0.46
RTN1-201ENST00000267484 M0QXV9 152 aa12.18□□□□□ -0.46
RTN1-201ENST00000267484 NHLRC4P0CG21 123 aaPredicted RBP12.18□□□□□ -0.46
RTN1-201ENST00000267484 C11orf44Q8N8P7 122 aa12.18□□□□□ -0.46
RTN1-201ENST00000267484 A0A096LNT2 108 aa12.18□□□□□ -0.46
RTN1-201ENST00000267484 C15orf53Q8NAA6 179 aa12.18□□□□□ -0.46
RTN1-201ENST00000267484 Q9H8V8 135 aa12.18□□□□□ -0.46
RTN1-201ENST00000267484 TRAV13-1A0A0B4J241 112 aa12.17□□□□□ -0.46
RTN1-201ENST00000267484 COX6CP09669 75 aa12.17□□□□□ -0.46
RTN1-201ENST00000267484 Q6YL49 198 aa12.17□□□□□ -0.46
RTN1-201ENST00000267484 DYNLRB2Q8TF09 96 aa12.17□□□□□ -0.46
RTN1-201ENST00000267484 CCDC168Q8NDH2 2452 aa12.17□□□□□ -0.46
RTN1-201ENST00000267484 CITED2Q99967 270 aaPredicted RBP12.16□□□□□ -0.46
RTN1-201ENST00000267484 SS18L2Q9UHA2 77 aa12.16□□□□□ -0.46
RTN1-201ENST00000267484 TRGV1A0A0A0MS02 117 aa12.15□□□□□ -0.46
RTN1-201ENST00000267484 LST1O00453 97 aa12.14□□□□□ -0.47
RTN1-201ENST00000267484 B5MCH6 92 aa12.14□□□□□ -0.47
RTN1-201ENST00000267484 LINC00242Q5T6M2 205 aa12.14□□□□□ -0.47
RTN1-201ENST00000267484 Q8N2B8 174 aa12.14□□□□□ -0.47
RTN1-201ENST00000267484 A8MTW9 85 aa12.13□□□□□ -0.47
RTN1-201ENST00000267484 NDUFV3P56181 108 aaKnown RBP12.13□□□□□ -0.47
RTN1-201ENST00000267484 NDUFA1O15239 70 aa12.13□□□□□ -0.47
RTN1-201ENST00000267484 INSP01308 110 aa12.13□□□□□ -0.47
RTN1-201ENST00000267484 SOSTDC1Q6X4U4 206 aa12.13□□□□□ -0.47
RTN1-201ENST00000267484 LINC00308Q8TCZ7 52 aa12.13□□□□□ -0.47
RTN1-201ENST00000267484 YAE1D1Q9NRH1 226 aa12.12□□□□□ -0.47
RTN1-201ENST00000267484 A0A1W2PRX2 142 aa12.12□□□□□ -0.47
RTN1-201ENST00000267484 RS1O15537 224 aa12.12□□□□□ -0.47
RTN1-201ENST00000267484 DSCR9P59020 149 aa12.12□□□□□ -0.47
RTN1-201ENST00000267484 DEFB114Q30KQ6 69 aa12.12□□□□□ -0.47
RTN1-201ENST00000267484 SETXQ7Z333 2677 aaKnown RBP12.11□□□□□ -0.47
RTN1-201ENST00000267484 KRTAP10-9P60411 292 aa12.11□□□□□ -0.47
RTN1-201ENST00000267484 BEAN1Q3B7T3 259 aa12.11□□□□□ -0.47
RTN1-201ENST00000267484 C3orf56Q8N813 242 aa12.11□□□□□ -0.47
RTN1-201ENST00000267484 CCDC179H3BU77 68 aa12.11□□□□□ -0.47
RTN1-201ENST00000267484 NTM-AS1Q6ZSK4 140 aa12.11□□□□□ -0.47
RTN1-201ENST00000267484 Q6ZTI0 123 aa12.11□□□□□ -0.47
RTN1-201ENST00000267484 PEMTQ9UBM1 199 aa12.11□□□□□ -0.47
RTN1-201ENST00000267484 IGHV4-31P0DP07 118 aa12.1□□□□□ -0.47
RTN1-201ENST00000267484 H3BT86 120 aa12.1□□□□□ -0.47
RTN1-201ENST00000267484 PRB1P04280 392 aa12.1□□□□□ -0.47
RTN1-201ENST00000267484 TIRAPP58753 221 aa12.1□□□□□ -0.47
RTN1-201ENST00000267484 ODF3L2Q3SX64 289 aa12.1□□□□□ -0.47
RTN1-201ENST00000267484 C1orf158Q8N1D5 194 aa12.1□□□□□ -0.47
RTN1-201ENST00000267484 NBPF19A0A087WUL8 3843 aa12.1□□□□□ -0.47
RTN1-201ENST00000267484 IGLV5-45A0A087WSX0 123 aa12.09□□□□□ -0.47
RTN1-201ENST00000267484 GAGE12JA6NER3 117 aa12.09□□□□□ -0.47
RTN1-201ENST00000267484 J3QLI3 93 aa12.09□□□□□ -0.47
RTN1-201ENST00000267484 GAGE4Q13068 117 aa12.09□□□□□ -0.47
RTN1-201ENST00000267484 GAGE5Q13069 117 aa12.09□□□□□ -0.47
RTN1-201ENST00000267484 MEIG1Q5JSS6 88 aa12.09□□□□□ -0.47
RTN1-201ENST00000267484 DNAJC30Q96LL9 226 aa12.09□□□□□ -0.47
RTN1-201ENST00000267484 CIRBPQ14011 172 aaKnown RBP12.09□□□□□ -0.47
RTN1-201ENST00000267484 SMIM1B2RUZ4 78 aa12.09□□□□□ -0.47
RTN1-201ENST00000267484 CR1P17927 2039 aa12.09□□□□□ -0.47
RTN1-201ENST00000267484 IFITM1P13164 125 aa12.08□□□□□ -0.48
RTN1-201ENST00000267484 PRIMA1Q86XR5 153 aa12.08□□□□□ -0.48
RTN1-201ENST00000267484 PIK3CD-AS1Q5SR53 167 aa12.08□□□□□ -0.48
RTN1-201ENST00000267484 LINC01600Q96MT4 127 aa12.08□□□□□ -0.48
RTN1-201ENST00000267484 TIMM17BO60830 172 aa12.08□□□□□ -0.48
RTN1-201ENST00000267484 FSHBP01225 129 aa12.08□□□□□ -0.48
RTN1-201ENST00000267484 GAGE6Q13070 117 aa12.08□□□□□ -0.48
RTN1-201ENST00000267484 IGLV5-39A0A0G2JS06 123 aa12.07□□□□□ -0.48
RTN1-201ENST00000267484 IGKV3OR2-268A0A0C4DH90 116 aa12.07□□□□□ -0.48
RTN1-201ENST00000267484 HERVK_113P63121 156 aa12.07□□□□□ -0.48
RTN1-201ENST00000267484 STHQ8IWL8 128 aa12.07□□□□□ -0.48
RTN1-201ENST00000267484 C4orf3Q8WVX3 66 aa12.06□□□□□ -0.48
RTN1-201ENST00000267484 Q96MF0 132 aa12.05□□□□□ -0.48
RTN1-201ENST00000267484 LOC100131303A0A0U1RQF7 123 aa12.05□□□□□ -0.48
RTN1-201ENST00000267484 PLA2G2AP14555 144 aa12.05□□□□□ -0.48
RTN1-201ENST00000267484 FN1P02751 2386 aaKnown RBP12.04□□□□□ -0.48
RTN1-201ENST00000267484 RPL36AP83881 106 aaKnown RBP12.04□□□□□ -0.48
RTN1-201ENST00000267484 RPL36ALQ969Q0 106 aaKnown RBP12.04□□□□□ -0.48
RTN1-201ENST00000267484 NOP10Q9NPE3 64 aaKnown RBP12.04□□□□□ -0.48
RTN1-201ENST00000267484 WFDC10AQ9H1F0 79 aa12.04□□□□□ -0.48
RTN1-201ENST00000267484 K7EQD1 137 aa12.03□□□□□ -0.48
RTN1-201ENST00000267484 FAM218AQ96MZ4 157 aa12.03□□□□□ -0.48
RTN1-201ENST00000267484 MTORP42345 2549 aa12.03□□□□□ -0.48
RTN1-201ENST00000267484 ITPR3Q14573 2671 aa12.02□□□□□ -0.48
RTN1-201ENST00000267484 COX7A2LO14548 114 aa12.02□□□□□ -0.49
RTN1-201ENST00000267484 CDC42SE2Q9NRR3 84 aa12.02□□□□□ -0.49
RTN1-201ENST00000267484 F5H768 121 aa12.02□□□□□ -0.49
RTN1-201ENST00000267484 GAGE7O76087 117 aa12.01□□□□□ -0.49
RTN1-201ENST00000267484 GAGE12FP0CL80 117 aa12.01□□□□□ -0.49
RTN1-201ENST00000267484 GAGE12GP0CL81 117 aa12.01□□□□□ -0.49
RTN1-201ENST00000267484 GAGE12IP0CL82 117 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms