RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 TRBV6-5A0A0K0K1A5 114 aa13.35□□□□□ -0.27
COL5A3-201ENST00000264828 WFDC13Q8IUB5 93 aa13.35□□□□□ -0.27
COL5A3-201ENST00000264828 CACNA1HO95180 2353 aa13.34□□□□□ -0.27
COL5A3-201ENST00000264828 BBC3Q96PG8 261 aaPredicted RBP13.34□□□□□ -0.27
COL5A3-201ENST00000264828 YPEL4Q96NS1 127 aa13.34□□□□□ -0.27
COL5A3-201ENST00000264828 LOC100131303A0A0U1RQF7 123 aa13.33□□□□□ -0.28
COL5A3-201ENST00000264828 CCDC179H3BU77 68 aa13.33□□□□□ -0.28
COL5A3-201ENST00000264828 PCNX2A6NKB5 2137 aa13.33□□□□□ -0.28
COL5A3-201ENST00000264828 SMIM9A6NGZ8 99 aa13.33□□□□□ -0.28
COL5A3-201ENST00000264828 TSHBP01222 138 aa13.33□□□□□ -0.28
COL5A3-201ENST00000264828 SPINK6Q6UWN8 80 aa13.33□□□□□ -0.28
COL5A3-201ENST00000264828 C2orf91Q6ZV80 131 aa13.32□□□□□ -0.28
COL5A3-201ENST00000264828 PRM2P04554 102 aa13.32□□□□□ -0.28
COL5A3-201ENST00000264828 IGLV2-11P01706 119 aa13.32□□□□□ -0.28
COL5A3-201ENST00000264828 MED13LQ71F56 2210 aa13.32□□□□□ -0.28
COL5A3-201ENST00000264828 NDUFA7O95182 113 aa13.31□□□□□ -0.28
COL5A3-201ENST00000264828 HILS1P60008 231 aa13.31□□□□□ -0.28
COL5A3-201ENST00000264828 PRR9Q5T870 116 aa13.3□□□□□ -0.28
COL5A3-201ENST00000264828 Q6ZS46 218 aa13.3□□□□□ -0.28
COL5A3-201ENST00000264828 RBX1P62877 108 aa13.3□□□□□ -0.28
COL5A3-201ENST00000264828 SYCNQ0VAF6 134 aa13.3□□□□□ -0.28
COL5A3-201ENST00000264828 Q6ZQY7 126 aa13.3□□□□□ -0.28
COL5A3-201ENST00000264828 NRACQ8N912 160 aa13.3□□□□□ -0.28
COL5A3-201ENST00000264828 ZNF843Q8N446 348 aa13.3□□□□□ -0.28
COL5A3-201ENST00000264828 FAM30AQ9NZY2 134 aa13.3□□□□□ -0.28
COL5A3-201ENST00000264828 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.3□□□□□ -0.28
COL5A3-201ENST00000264828 KIR2DL5BQ8NHK3 375 aa13.3□□□□□ -0.28
COL5A3-201ENST00000264828 LY6LH3BQJ8 138 aa13.29□□□□□ -0.28
COL5A3-201ENST00000264828 K7ERS5 55 aa13.29□□□□□ -0.28
COL5A3-201ENST00000264828 SMIM11BQ8TCY0 68 aa13.29□□□□□ -0.28
COL5A3-201ENST00000264828 RPL37AP8A6NKH3 93 aa13.29□□□□□ -0.28
COL5A3-201ENST00000264828 TRBV6-4A0A1B0GX49 114 aa13.29□□□□□ -0.28
COL5A3-201ENST00000264828 GAS8-AS1O95177 125 aa13.29□□□□□ -0.28
COL5A3-201ENST00000264828 INAFM1C9JVW0 142 aa13.28□□□□□ -0.28
COL5A3-201ENST00000264828 SERP2Q8N6R1 65 aa13.28□□□□□ -0.28
COL5A3-201ENST00000264828 IGHV4-30-4P0DP06 118 aa13.28□□□□□ -0.28
COL5A3-201ENST00000264828 PRR15LQ9BU68 103 aa13.28□□□□□ -0.28
COL5A3-201ENST00000264828 TRBV27A0A0K0K1C4 114 aa13.27□□□□□ -0.28
COL5A3-201ENST00000264828 WFDC10AQ9H1F0 79 aa13.27□□□□□ -0.28
COL5A3-201ENST00000264828 RNASE3P12724 160 aaKnown RBP13.27□□□□□ -0.28
COL5A3-201ENST00000264828 IGLV2-18A0A075B6J9 118 aa13.27□□□□□ -0.29
COL5A3-201ENST00000264828 C18orf65Q6ZTR6 163 aa13.27□□□□□ -0.29
COL5A3-201ENST00000264828 A6NED7 52 aa13.26□□□□□ -0.29
COL5A3-201ENST00000264828 UBE2D4Q9Y2X8 147 aa13.26□□□□□ -0.29
COL5A3-201ENST00000264828 C11orf21Q9P2W6 132 aa13.26□□□□□ -0.29
COL5A3-201ENST00000264828 NCOA6Q14686 2063 aaPredicted RBP13.26□□□□□ -0.29
COL5A3-201ENST00000264828 Q6ZSV7 163 aa13.26□□□□□ -0.29
COL5A3-201ENST00000264828 FAM19A3Q7Z5A8 133 aa13.26□□□□□ -0.29
COL5A3-201ENST00000264828 V9GYY9 64 aa13.26□□□□□ -0.29
COL5A3-201ENST00000264828 CEP192Q8TEP8 1941 aa13.25□□□□□ -0.29
COL5A3-201ENST00000264828 LST1O00453 97 aa13.25□□□□□ -0.29
COL5A3-201ENST00000264828 IL17DQ8TAD2 202 aa13.25□□□□□ -0.29
COL5A3-201ENST00000264828 PYGO1Q9Y3Y4 419 aa13.25□□□□□ -0.29
COL5A3-201ENST00000264828 TNCP24821 2201 aa13.25□□□□□ -0.29
COL5A3-201ENST00000264828 XGP55808 180 aa13.25□□□□□ -0.29
COL5A3-201ENST00000264828 TIMM17BO60830 172 aa13.24□□□□□ -0.29
COL5A3-201ENST00000264828 MIFP14174 115 aa13.24□□□□□ -0.29
COL5A3-201ENST00000264828 POM121L12Q8N7R1 296 aa13.24□□□□□ -0.29
COL5A3-201ENST00000264828 M0R2N4 97 aa13.23□□□□□ -0.29
COL5A3-201ENST00000264828 C11orf71Q6IPW1 123 aa13.23□□□□□ -0.29
COL5A3-201ENST00000264828 C9orf85Q96MD7 179 aa13.23□□□□□ -0.29
COL5A3-201ENST00000264828 CREBBPQ92793 2442 aa13.23□□□□□ -0.29
COL5A3-201ENST00000264828 IGLV9-49A0A0B4J1Y8 123 aa13.23□□□□□ -0.29
COL5A3-201ENST00000264828 LINC00959A0A1B0GUT2 108 aa13.23□□□□□ -0.29
COL5A3-201ENST00000264828 CLUHP3Q96NS8 147 aa13.23□□□□□ -0.29
COL5A3-201ENST00000264828 CD164L2Q6UWJ8 174 aa13.22□□□□□ -0.29
COL5A3-201ENST00000264828 M0R378 163 aa13.22□□□□□ -0.29
COL5A3-201ENST00000264828 UBE2D1P51668 147 aa13.21□□□□□ -0.29
COL5A3-201ENST00000264828 ATP5EP56381 51 aaPredicted RBP13.21□□□□□ -0.29
COL5A3-201ENST00000264828 EBI3Q14213 229 aa13.21□□□□□ -0.29
COL5A3-201ENST00000264828 KIAA1549Q9HCM3 1950 aa13.21□□□□□ -0.3
COL5A3-201ENST00000264828 NDUFC1O43677 76 aa13.2□□□□□ -0.3
COL5A3-201ENST00000264828 COX7CP15954 63 aa13.2□□□□□ -0.3
COL5A3-201ENST00000264828 DHRS4-AS1Q9P1J3 65 aa13.2□□□□□ -0.3
COL5A3-201ENST00000264828 ZNF702PQ9H963 129 aa13.19□□□□□ -0.3
COL5A3-201ENST00000264828 LINC00694P0DN24 101 aa13.18□□□□□ -0.3
COL5A3-201ENST00000264828 C7orf33Q8WU49 177 aa13.18□□□□□ -0.3
COL5A3-201ENST00000264828 TANC2Q9HCD6 1990 aa13.18□□□□□ -0.3
COL5A3-201ENST00000264828 CELA1Q9UNI1 258 aa13.18□□□□□ -0.3
COL5A3-201ENST00000264828 ALPK3Q96L96 1907 aa13.18□□□□□ -0.3
COL5A3-201ENST00000264828 IMUPQ9GZP8 106 aa13.18□□□□□ -0.3
COL5A3-201ENST00000264828 KPRPQ5T749 579 aaPredicted RBP13.17□□□□□ -0.3
COL5A3-201ENST00000264828 FREM1Q5H8C1 2179 aa13.17□□□□□ -0.3
COL5A3-201ENST00000264828 Q8N9L7 120 aa13.17□□□□□ -0.3
COL5A3-201ENST00000264828 FSTL3O95633 263 aa13.16□□□□□ -0.3
COL5A3-201ENST00000264828 IGLV4-69A0A075B6H9 119 aa13.16□□□□□ -0.3
COL5A3-201ENST00000264828 ZNF73O43830 326 aaPredicted RBP13.16□□□□□ -0.3
COL5A3-201ENST00000264828 LY6G6DO95868 133 aa13.15□□□□□ -0.3
COL5A3-201ENST00000264828 TRAV10A0A0B4J240 114 aa13.15□□□□□ -0.3
COL5A3-201ENST00000264828 PTPRSQ13332 1948 aa13.14□□□□□ -0.31
COL5A3-201ENST00000264828 SERP1Q9Y6X1 66 aa13.14□□□□□ -0.31
COL5A3-201ENST00000264828 KLLNB2CW77 178 aa13.14□□□□□ -0.31
COL5A3-201ENST00000264828 POLR2KP53803 58 aaKnown RBP13.14□□□□□ -0.31
COL5A3-201ENST00000264828 PLAC8L1A1L4L8 177 aa13.14□□□□□ -0.31
COL5A3-201ENST00000264828 MRPS36P82909 103 aaKnown RBP13.13□□□□□ -0.31
COL5A3-201ENST00000264828 LELP1Q5T871 98 aa13.13□□□□□ -0.31
COL5A3-201ENST00000264828 EDN2P20800 178 aa13.13□□□□□ -0.31
COL5A3-201ENST00000264828 LOC107984640A0A0U1RRK4 108 aa13.12□□□□□ -0.31
COL5A3-201ENST00000264828 CRIP2P52943 208 aaPredicted RBP13.12□□□□□ -0.31
COL5A3-201ENST00000264828 PSMG3-AS1Q96PY0 264 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms