RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 Q9UF83 564 aa8.93□□□□□ -0.98
CHMP2B-201ENST00000263780 LAMA5O15230 3695 aa8.93□□□□□ -0.98
CHMP2B-201ENST00000263780 DNAL4O96015 105 aa8.92□□□□□ -0.98
CHMP2B-201ENST00000263780 CRPP02741 224 aa8.92□□□□□ -0.98
CHMP2B-201ENST00000263780 HIST1H4AP62805 103 aaKnown RBP8.92□□□□□ -0.98
CHMP2B-201ENST00000263780 MSMBP08118 114 aa8.92□□□□□ -0.98
CHMP2B-201ENST00000263780 C10orf105Q8TEF2 133 aa8.92□□□□□ -0.98
CHMP2B-201ENST00000263780 H0YGX0 51 aa8.91□□□□□ -0.98
CHMP2B-201ENST00000263780 HOXD3P31249 432 aaPredicted RBP8.91□□□□□ -0.98
CHMP2B-201ENST00000263780 NBL1P41271 181 aa8.91□□□□□ -0.98
CHMP2B-201ENST00000263780 C22orf24Q9Y442 160 aa8.91□□□□□ -0.98
CHMP2B-201ENST00000263780 COL6A6A6NMZ7 2263 aa8.9□□□□□ -0.98
CHMP2B-201ENST00000263780 SPTA1P02549 2419 aa8.9□□□□□ -0.98
CHMP2B-201ENST00000263780 RPL36AP83881 106 aaKnown RBP8.9□□□□□ -0.99
CHMP2B-201ENST00000263780 C11orf72Q8NBR9 251 aa8.9□□□□□ -0.99
CHMP2B-201ENST00000263780 RPL36ALQ969Q0 106 aaKnown RBP8.9□□□□□ -0.99
CHMP2B-201ENST00000263780 C2orf48Q96LS8 159 aa8.9□□□□□ -0.99
CHMP2B-201ENST00000263780 FAM218AQ96MZ4 157 aa8.9□□□□□ -0.99
CHMP2B-201ENST00000263780 HRNRQ86YZ3 2850 aaPredicted RBP8.89□□□□□ -0.99
CHMP2B-201ENST00000263780 TRAV13-1A0A0B4J241 112 aa8.89□□□□□ -0.99
CHMP2B-201ENST00000263780 TRBV10-1A0A0K0K1A3 114 aa8.89□□□□□ -0.99
CHMP2B-201ENST00000263780 INSP01308 110 aa8.89□□□□□ -0.99
CHMP2B-201ENST00000263780 RPL18AQ02543 176 aaKnown RBP8.89□□□□□ -0.99
CHMP2B-201ENST00000263780 UBE2E2Q96LR5 201 aa8.89□□□□□ -0.99
CHMP2B-201ENST00000263780 PTPRZ1P23471 2315 aaPredicted RBP8.89□□□□□ -0.99
CHMP2B-201ENST00000263780 Q6JHZ5 121 aa8.89□□□□□ -0.99
CHMP2B-201ENST00000263780 DOPEY2Q9Y3R5 2298 aa8.89□□□□□ -0.99
CHMP2B-201ENST00000263780 RBMY1BA6NDE4 496 aaKnown RBP8.88□□□□□ -0.99
CHMP2B-201ENST00000263780 RBMY1EA6NEQ0 496 aaKnown RBP8.88□□□□□ -0.99
CHMP2B-201ENST00000263780 F5H768 121 aa8.88□□□□□ -0.99
CHMP2B-201ENST00000263780 RBMY1DP0C7P1 496 aaKnown RBP8.88□□□□□ -0.99
CHMP2B-201ENST00000263780 C5orf47Q569G3 176 aa8.88□□□□□ -0.99
CHMP2B-201ENST00000263780 PTPRQQ9UMZ3 2332 aa8.88□□□□□ -0.99
CHMP2B-201ENST00000263780 ZNF292O60281 2723 aa8.88□□□□□ -0.99
CHMP2B-201ENST00000263780 RIF1Q5UIP0 2472 aaKnown RBP8.87□□□□□ -0.99
CHMP2B-201ENST00000263780 B4DSR2 109 aa8.87□□□□□ -0.99
CHMP2B-201ENST00000263780 C10orf99Q6UWK7 81 aa8.87□□□□□ -0.99
CHMP2B-201ENST00000263780 Q9HAA7 133 aa8.87□□□□□ -0.99
CHMP2B-201ENST00000263780 CDC42SE2Q9NRR3 84 aa8.87□□□□□ -0.99
CHMP2B-201ENST00000263780 OR13C6PQ8NH95 151 aa8.87□□□□□ -0.99
CHMP2B-201ENST00000263780 TTC28Q96AY4 2481 aa8.86□□□□□ -0.99
CHMP2B-201ENST00000263780 IGHV4-59P01825 116 aa8.86□□□□□ -0.99
CHMP2B-201ENST00000263780 CCL19Q99731 98 aa8.86□□□□□ -0.99
CHMP2B-201ENST00000263780 PRM2P04554 102 aa8.86□□□□□ -0.99
CHMP2B-201ENST00000263780 SND1-IT1Q9HBX3 110 aa8.86□□□□□ -0.99
CHMP2B-201ENST00000263780 TMEM258P61165 79 aa8.85□□□□□ -0.99
CHMP2B-201ENST00000263780 SERP2Q8N6R1 65 aa8.85□□□□□ -0.99
CHMP2B-201ENST00000263780 OBSCN-AS1Q96MR7 158 aa8.85□□□□□ -0.99
CHMP2B-201ENST00000263780 KLK5Q9Y337 293 aaPredicted RBP8.85□□□□□ -0.99
CHMP2B-201ENST00000263780 K7EQD1 137 aa8.84□□□□□ -0.99
CHMP2B-201ENST00000263780 UBE2L6O14933 153 aa8.84□□□□□ -0.99
CHMP2B-201ENST00000263780 DEFB112Q30KQ8 113 aa8.84□□□□□ -0.99
CHMP2B-201ENST00000263780 COX7B2Q8TF08 81 aa8.84□□□□□ -0.99
CHMP2B-201ENST00000263780 LOC107984640A0A0U1RRK4 108 aa8.84□□□□□ -0.99
CHMP2B-201ENST00000263780 NACAE9PAV3 2078 aa8.84□□□□□ -0.99
CHMP2B-201ENST00000263780 ATP5J2P56134 94 aa8.84□□□□□ -0.99
CHMP2B-201ENST00000263780 FAM19A5Q7Z5A7 132 aaPredicted RBP8.84□□□□□ -0.99
CHMP2B-201ENST00000263780 MIR7-3HGQ8N6C7 128 aa8.84□□□□□ -0.99
CHMP2B-201ENST00000263780 IGHV4-30-2A0A087WSY4 118 aa8.83□□□□□ -1
CHMP2B-201ENST00000263780 hADV29S1A0JD25 119 aa8.83□□□□□ -1
CHMP2B-201ENST00000263780 LINC00337Q8N6G1 96 aa8.83□□□□□ -1
CHMP2B-201ENST00000263780 SMIM11BQ8TCY0 68 aa8.83□□□□□ -1
CHMP2B-201ENST00000263780 SMIM9A6NGZ8 99 aa8.83□□□□□ -1
CHMP2B-201ENST00000263780 S100A7L2Q5SY68 101 aa8.83□□□□□ -1
CHMP2B-201ENST00000263780 TMEM243Q9BU79 118 aa8.83□□□□□ -1
CHMP2B-201ENST00000263780 MAP6D1Q9H9H5 199 aa8.83□□□□□ -1
CHMP2B-201ENST00000263780 AVPP01185 164 aa8.82□□□□□ -1
CHMP2B-201ENST00000263780 C14orf132Q9NPU4 83 aa8.82□□□□□ -1
CHMP2B-201ENST00000263780 SPTAN1Q13813 2472 aaKnown RBP8.82□□□□□ -1
CHMP2B-201ENST00000263780 ABCA2Q9BZC7 2435 aa8.82□□□□□ -1
CHMP2B-201ENST00000263780 TRGV1A0A0A0MS02 117 aa8.82□□□□□ -1
CHMP2B-201ENST00000263780 LINC00158P58513 81 aa8.82□□□□□ -1
CHMP2B-201ENST00000263780 NTM-AS1Q6ZSK4 140 aa8.82□□□□□ -1
CHMP2B-201ENST00000263780 DYNLRB2Q8TF09 96 aa8.82□□□□□ -1
CHMP2B-201ENST00000263780 ZFHX2Q9C0A1 2572 aaPredicted RBP8.81□□□□□ -1
CHMP2B-201ENST00000263780 IGKV2-28A0A075B6P5 120 aa8.81□□□□□ -1
CHMP2B-201ENST00000263780 A0A087WYN8 130 aa8.81□□□□□ -1
CHMP2B-201ENST00000263780 C19orf84I3L1E1 186 aa8.81□□□□□ -1
CHMP2B-201ENST00000263780 IGKV2D-28P01615 120 aa8.81□□□□□ -1
CHMP2B-201ENST00000263780 IGKV3D-7A0A0C4DH55 119 aa8.81□□□□□ -1
CHMP2B-201ENST00000263780 IBA57-AS1B1ANH7 110 aa8.81□□□□□ -1
CHMP2B-201ENST00000263780 SLURP1P55000 103 aa8.8□□□□□ -1
CHMP2B-201ENST00000263780 DSCR9P59020 149 aa8.8□□□□□ -1
CHMP2B-201ENST00000263780 LINC00846Q9NV44 126 aa8.8□□□□□ -1
CHMP2B-201ENST00000263780 Q96MF0 132 aa8.8□□□□□ -1
CHMP2B-201ENST00000263780 NBASA2RRP1 2371 aa8.8□□□□□ -1
CHMP2B-201ENST00000263780 J3QLI3 93 aa8.79□□□□□ -1
CHMP2B-201ENST00000263780 IL17DQ8TAD2 202 aa8.79□□□□□ -1
CHMP2B-201ENST00000263780 SORL1Q92673 2214 aa8.79□□□□□ -1
CHMP2B-201ENST00000263780 USP17L23D6RBM5 183 aa8.79□□□□□ -1
CHMP2B-201ENST00000263780 ATP5EP2Q5VTU8 51 aa8.79□□□□□ -1
CHMP2B-201ENST00000263780 ORMDL1Q9P0S3 153 aa8.79□□□□□ -1
CHMP2B-201ENST00000263780 LECT2O14960 151 aa8.78□□□□□ -1
CHMP2B-201ENST00000263780 CCL18P55774 89 aa8.78□□□□□ -1
CHMP2B-201ENST00000263780 DPH3Q96FX2 82 aa8.78□□□□□ -1
CHMP2B-201ENST00000263780 ZNF702PQ9H963 129 aa8.78□□□□□ -1
CHMP2B-201ENST00000263780 TOMM7Q9P0U1 55 aa8.78□□□□□ -1
CHMP2B-201ENST00000263780 LINC01356Q8N9X3 169 aa8.78□□□□□ -1
CHMP2B-201ENST00000263780 XCL2Q9UBD3 114 aa8.78□□□□□ -1
CHMP2B-201ENST00000263780 CCKP06307 115 aa8.77□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 106.3 ms