RNA–Protein interactions for RNA: ENST00000263598.6

LCN1-201, Transcript of lipocalin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCN1, Length 776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1-201ENST00000263598 H7C1H1 209 aa5.66□□□□□ -1.5
LCN1-201ENST00000263598 RPL23P62829 140 aaKnown RBP5.66□□□□□ -1.5
LCN1-201ENST00000263598 WDR73Q6P4I2 378 aa5.66□□□□□ -1.5
LCN1-201ENST00000263598 CFAP161Q6P656 301 aa5.66□□□□□ -1.5
LCN1-201ENST00000263598 C20orf203Q8NBC4 194 aa5.66□□□□□ -1.5
LCN1-201ENST00000263598 AP1S3Q96PC3 154 aa5.66□□□□□ -1.5
LCN1-201ENST00000263598 HIST1H2BLQ99880 126 aa5.66□□□□□ -1.5
LCN1-201ENST00000263598 C2orf88Q9BSF0 95 aa5.66□□□□□ -1.5
LCN1-201ENST00000263598 SSBP4Q9BWG4 385 aaPredicted RBP5.66□□□□□ -1.5
LCN1-201ENST00000263598 KIF25-AS1Q9Y6Z4 181 aa5.66□□□□□ -1.5
LCN1-201ENST00000263598 A0A1B0GUV1 79 aa5.65□□□□□ -1.5
LCN1-201ENST00000263598 SLPIP03973 132 aa5.65□□□□□ -1.5
LCN1-201ENST00000263598 DDTP30046 118 aa5.65□□□□□ -1.5
LCN1-201ENST00000263598 GTSF1Q8WW33 167 aa5.65□□□□□ -1.5
LCN1-201ENST00000263598 TMEM243Q9BU79 118 aa5.65□□□□□ -1.5
LCN1-201ENST00000263598 IGLV4-60A0A075B6I1 120 aa5.64□□□□□ -1.51
LCN1-201ENST00000263598 UBE2L6O14933 153 aa5.64□□□□□ -1.51
LCN1-201ENST00000263598 PAGE4O60829 102 aa5.64□□□□□ -1.51
LCN1-201ENST00000263598 MGPP08493 103 aa5.64□□□□□ -1.51
LCN1-201ENST00000263598 ESDP10768 282 aa5.64□□□□□ -1.51
LCN1-201ENST00000263598 CEBPGP53567 150 aa5.64□□□□□ -1.51
LCN1-201ENST00000263598 PRR3P79522 188 aaKnown RBP5.64□□□□□ -1.51
LCN1-201ENST00000263598 COX6A2Q02221 97 aa5.64□□□□□ -1.51
LCN1-201ENST00000263598 ADIRFQ15847 76 aa5.64□□□□□ -1.51
LCN1-201ENST00000263598 MAJINQ3KP22 176 aa5.64□□□□□ -1.51
LCN1-201ENST00000263598 BAGE2Q86Y30 109 aa5.64□□□□□ -1.51
LCN1-201ENST00000263598 C11orf52Q96A22 123 aa5.64□□□□□ -1.51
LCN1-201ENST00000263598 A0A0J9YXV3 536 aa5.63□□□□□ -1.51
LCN1-201ENST00000263598 A0A1B0GV50 99 aa5.63□□□□□ -1.51
LCN1-201ENST00000263598 M0QY20 66 aa5.63□□□□□ -1.51
LCN1-201ENST00000263598 MT-ND6P03923 174 aa5.63□□□□□ -1.51
LCN1-201ENST00000263598 FABP4P15090 132 aa5.63□□□□□ -1.51
LCN1-201ENST00000263598 REG3GQ6UW15 175 aa5.63□□□□□ -1.51
LCN1-201ENST00000263598 C14orf144Q96I85 54 aa5.63□□□□□ -1.51
LCN1-201ENST00000263598 MLST8Q9BVC4 326 aa5.63□□□□□ -1.51
LCN1-201ENST00000263598 IGKV2-24A0A0C4DH68 120 aa5.62□□□□□ -1.51
LCN1-201ENST00000263598 SCO2A0A1W2PP80 73 aa5.62□□□□□ -1.51
LCN1-201ENST00000263598 XKRY2A2RUG3 117 aa5.62□□□□□ -1.51
LCN1-201ENST00000263598 GAGE12HA6NDE8 117 aa5.62□□□□□ -1.51
LCN1-201ENST00000263598 SUMO4Q6EEV6 95 aa5.62□□□□□ -1.51
LCN1-201ENST00000263598 RASL11AQ6T310 242 aa5.62□□□□□ -1.51
LCN1-201ENST00000263598 SPINK6Q6UWN8 80 aa5.62□□□□□ -1.51
LCN1-201ENST00000263598 LINC01551Q86U37 167 aa5.62□□□□□ -1.51
LCN1-201ENST00000263598 STPG4Q8N801 248 aa5.62□□□□□ -1.51
LCN1-201ENST00000263598 C15orf56Q8N910 161 aa5.62□□□□□ -1.51
LCN1-201ENST00000263598 PGLYRP4Q96LB8 373 aa5.62□□□□□ -1.51
LCN1-201ENST00000263598 TPPP3Q9BW30 176 aa5.62□□□□□ -1.51
LCN1-201ENST00000263598 GFRA4Q9GZZ7 299 aa5.62□□□□□ -1.51
LCN1-201ENST00000263598 TNXBP22105 4242 aa5.61□□□□□ -1.51
LCN1-201ENST00000263598 AMTP48728 403 aa5.61□□□□□ -1.51
LCN1-201ENST00000263598 CACNG7P62955 275 aa5.61□□□□□ -1.51
LCN1-201ENST00000263598 COTL1Q14019 142 aa5.61□□□□□ -1.51
LCN1-201ENST00000263598 HIGD2BQ4VC39 106 aa5.61□□□□□ -1.51
LCN1-201ENST00000263598 FER1L6-AS1Q8NA97 138 aa5.61□□□□□ -1.51
LCN1-201ENST00000263598 PRSS3P2Q8NHM4 247 aa5.61□□□□□ -1.51
LCN1-201ENST00000263598 LINC00474Q9P2X8 69 aa5.61□□□□□ -1.51
LCN1-201ENST00000263598 PKIGQ9Y2B9 76 aa5.61□□□□□ -1.51
LCN1-201ENST00000263598 IGKV3OR2-268A0A0C4DH90 116 aa5.6□□□□□ -1.51
LCN1-201ENST00000263598 RAB4AP20338 218 aa5.6□□□□□ -1.51
LCN1-201ENST00000263598 KRTAP10-8P60410 259 aa5.6□□□□□ -1.51
LCN1-201ENST00000263598 RPS20P60866 119 aaKnown RBP5.6□□□□□ -1.51
LCN1-201ENST00000263598 ODF1Q14990 250 aa5.6□□□□□ -1.51
LCN1-201ENST00000263598 SMIM12Q96EX1 92 aa5.6□□□□□ -1.51
LCN1-201ENST00000263598 GNB1LQ9BYB4 327 aa5.6□□□□□ -1.51
LCN1-201ENST00000263598 F2Z2F3 143 aa5.59□□□□□ -1.51
LCN1-201ENST00000263598 AMMECR1LQ6DCA0 310 aa5.59□□□□□ -1.51
LCN1-201ENST00000263598 OR2D3Q8NGH3 330 aa5.59□□□□□ -1.51
LCN1-201ENST00000263598 TRAPPC1Q9Y5R8 145 aa5.59□□□□□ -1.51
LCN1-201ENST00000263598 A0A096LNI7 61 aa5.58□□□□□ -1.52
LCN1-201ENST00000263598 GVQW2A0A096LPI5 108 aaPredicted RBP5.58□□□□□ -1.52
LCN1-201ENST00000263598 GAS8-AS1O95177 125 aa5.58□□□□□ -1.52
LCN1-201ENST00000263598 IGLC6P0CF74 106 aa5.58□□□□□ -1.52
LCN1-201ENST00000263598 Q6ZRP5 223 aa5.58□□□□□ -1.52
LCN1-201ENST00000263598 CHCHD10Q8WYQ3 142 aaPredicted RBP5.58□□□□□ -1.52
LCN1-201ENST00000263598 OSTCQ9NRP0 149 aa5.58□□□□□ -1.52
LCN1-201ENST00000263598 M0R143 59 aa5.57□□□□□ -1.52
LCN1-201ENST00000263598 ZNF664Q8N3J9 261 aa5.57□□□□□ -1.52
LCN1-201ENST00000263598 C20orf202A1L168 122 aa5.56□□□□□ -1.52
LCN1-201ENST00000263598 H7C423 109 aa5.56□□□□□ -1.52
LCN1-201ENST00000263598 NTF3P20783 257 aa5.56□□□□□ -1.52
LCN1-201ENST00000263598 SRSF9Q13242 221 aaKnown RBP eCLIP5.56□□□□□ -1.52
LCN1-201ENST00000263598 CENPWQ5EE01 88 aa5.56□□□□□ -1.52
LCN1-201ENST00000263598 RNASEKQ6P5S7 137 aaKnown RBP5.56□□□□□ -1.52
LCN1-201ENST00000263598 TEX43Q6ZNM6 134 aa5.56□□□□□ -1.52
LCN1-201ENST00000263598 C19orf71A6NCJ1 209 aa5.55□□□□□ -1.52
LCN1-201ENST00000263598 NCR2O95944 276 aa5.55□□□□□ -1.52
LCN1-201ENST00000263598 FOXI1Q12951 378 aa5.55□□□□□ -1.52
LCN1-201ENST00000263598 PDZD11Q5EBL8 140 aa5.55□□□□□ -1.52
LCN1-201ENST00000263598 LYZL1Q6UWQ5 148 aa5.55□□□□□ -1.52
LCN1-201ENST00000263598 FAM231DQ6ZW35 169 aa5.55□□□□□ -1.52
LCN1-201ENST00000263598 CARD19Q96LW7 228 aa5.55□□□□□ -1.52
LCN1-201ENST00000263598 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.54□□□□□ -1.52
LCN1-201ENST00000263598 IGHV1-58A0A0C4DH39 117 aa5.54□□□□□ -1.52
LCN1-201ENST00000263598 IGKV2-29A2NJV5 120 aaPredicted RBP5.54□□□□□ -1.52
LCN1-201ENST00000263598 FAM231BA6NCW3 169 aa5.54□□□□□ -1.52
LCN1-201ENST00000263598 APCSP02743 223 aa5.54□□□□□ -1.52
LCN1-201ENST00000263598 FGF6P10767 208 aa5.54□□□□□ -1.52
LCN1-201ENST00000263598 ZNF25P17030 456 aaPredicted RBP5.54□□□□□ -1.52
LCN1-201ENST00000263598 XCL1P47992 114 aa5.54□□□□□ -1.52
LCN1-201ENST00000263598 GNG4P50150 75 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms