RNA–Protein interactions for RNA: ENST00000262795.5

SHANK3-201, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS P5 TSL 5 BASIC

Gene SHANK3, Length 7,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-201ENST00000262795 IL15RAQ13261 267 aa11.85□□□□□ -0.51
SHANK3-201ENST00000262795 LINC01545Q5VT33 79 aa11.85□□□□□ -0.51
SHANK3-201ENST00000262795 SYCNQ0VAF6 134 aa11.85□□□□□ -0.51
SHANK3-201ENST00000262795 TEX49A0A1B0GTD5 131 aa11.85□□□□□ -0.51
SHANK3-201ENST00000262795 C1orf134Q5TEV5 83 aa11.84□□□□□ -0.51
SHANK3-201ENST00000262795 LINC01620Q4KN68 170 aa11.84□□□□□ -0.51
SHANK3-201ENST00000262795 IGLV3-1P01715 115 aa11.84□□□□□ -0.51
SHANK3-201ENST00000262795 IGLV2-14P01704 120 aa11.83□□□□□ -0.51
SHANK3-201ENST00000262795 UFSP1Q6NVU6 142 aa11.83□□□□□ -0.51
SHANK3-201ENST00000262795 RAI1Q7Z5J4 1906 aaPredicted RBP11.83□□□□□ -0.52
SHANK3-201ENST00000262795 Q6Q795 121 aa11.83□□□□□ -0.52
SHANK3-201ENST00000262795 ODF3BA8MYP8 253 aa11.83□□□□□ -0.52
SHANK3-201ENST00000262795 LINC00322Q6ZN03 302 aaPredicted RBP11.83□□□□□ -0.52
SHANK3-201ENST00000262795 PCDH15Q96QU1 1955 aa11.83□□□□□ -0.52
SHANK3-201ENST00000262795 PRO3102Q9H379 93 aa11.83□□□□□ -0.52
SHANK3-201ENST00000262795 SLPIP03973 132 aa11.82□□□□□ -0.52
SHANK3-201ENST00000262795 PRR14LQ5THK1 2151 aa11.82□□□□□ -0.52
SHANK3-201ENST00000262795 USP17L23D6RBM5 183 aa11.82□□□□□ -0.52
SHANK3-201ENST00000262795 IGHV1-58A0A0C4DH39 117 aa11.82□□□□□ -0.52
SHANK3-201ENST00000262795 SONP18583 2426 aaKnown RBP11.81□□□□□ -0.52
SHANK3-201ENST00000262795 IGLC6P0CF74 106 aa11.81□□□□□ -0.52
SHANK3-201ENST00000262795 XGP55808 180 aa11.81□□□□□ -0.52
SHANK3-201ENST00000262795 PRR15LQ9BU68 103 aa11.81□□□□□ -0.52
SHANK3-201ENST00000262795 C11orf71Q6IPW1 123 aa11.81□□□□□ -0.52
SHANK3-201ENST00000262795 TCL1BO95988 128 aa11.81□□□□□ -0.52
SHANK3-201ENST00000262795 C1orf158Q8N1D5 194 aa11.81□□□□□ -0.52
SHANK3-201ENST00000262795 TIMM17BO60830 172 aa11.8□□□□□ -0.52
SHANK3-201ENST00000262795 CUL9Q8IWT3 2517 aa11.8□□□□□ -0.52
SHANK3-201ENST00000262795 ALPK3Q96L96 1907 aa11.8□□□□□ -0.52
SHANK3-201ENST00000262795 ENHOQ6UWT2 76 aa11.8□□□□□ -0.52
SHANK3-201ENST00000262795 COA6Q5JTJ3 125 aaKnown RBP11.79□□□□□ -0.52
SHANK3-201ENST00000262795 M0QXV9 152 aa11.79□□□□□ -0.52
SHANK3-201ENST00000262795 NOTCH2Q04721 2471 aa11.79□□□□□ -0.52
SHANK3-201ENST00000262795 NUP210LQ5VU65 1888 aa11.79□□□□□ -0.52
SHANK3-201ENST00000262795 C3orf84H3BNL1 204 aa11.79□□□□□ -0.52
SHANK3-201ENST00000262795 ATRXP46100 2492 aa11.78□□□□□ -0.52
SHANK3-201ENST00000262795 H0YGX0 51 aa11.78□□□□□ -0.52
SHANK3-201ENST00000262795 HIVEP3Q5T1R4 2406 aa11.78□□□□□ -0.52
SHANK3-201ENST00000262795 SORL1Q92673 2214 aa11.78□□□□□ -0.52
SHANK3-201ENST00000262795 NEXN-AS1Q8NBZ9 246 aa11.78□□□□□ -0.52
SHANK3-201ENST00000262795 TRBV6-8A0A0A6YYG3 113 aa11.78□□□□□ -0.52
SHANK3-201ENST00000262795 TOMM6Q96B49 74 aa11.78□□□□□ -0.52
SHANK3-201ENST00000262795 KRTAP27-1Q3LI81 207 aa11.78□□□□□ -0.52
SHANK3-201ENST00000262795 PSMG3-AS1Q96PY0 264 aa11.77□□□□□ -0.52
SHANK3-201ENST00000262795 K7EQG2 157 aa11.77□□□□□ -0.53
SHANK3-201ENST00000262795 LINC01556Q5JQF7 62 aa11.77□□□□□ -0.53
SHANK3-201ENST00000262795 CFAP126Q5VTH2 177 aa11.77□□□□□ -0.53
SHANK3-201ENST00000262795 ZNF706Q9Y5V0 76 aaPredicted RBP11.76□□□□□ -0.53
SHANK3-201ENST00000262795 LOC107984640A0A0U1RRK4 108 aa11.76□□□□□ -0.53
SHANK3-201ENST00000262795 AVPP01185 164 aa11.76□□□□□ -0.53
SHANK3-201ENST00000262795 C1orf137Q5JT78 98 aa11.76□□□□□ -0.53
SHANK3-201ENST00000262795 EDN2P20800 178 aa11.75□□□□□ -0.53
SHANK3-201ENST00000262795 PMAIP1Q13794 54 aa11.75□□□□□ -0.53
SHANK3-201ENST00000262795 C11orf86A6NJI1 115 aa11.74□□□□□ -0.53
SHANK3-201ENST00000262795 TET2Q6N021 2002 aaPredicted RBP11.74□□□□□ -0.53
SHANK3-201ENST00000262795 Q6ZTC4 211 aa11.74□□□□□ -0.53
SHANK3-201ENST00000262795 PIK3CD-AS1Q5SR53 167 aa11.74□□□□□ -0.53
SHANK3-201ENST00000262795 ZNF80P51504 273 aaPredicted RBP11.74□□□□□ -0.53
SHANK3-201ENST00000262795 BPY2O14599 106 aa11.74□□□□□ -0.53
SHANK3-201ENST00000262795 TMEM256-PLSCR3K7ERE1 68 aa11.73□□□□□ -0.53
SHANK3-201ENST00000262795 LINC00694P0DN24 101 aa11.73□□□□□ -0.53
SHANK3-201ENST00000262795 ARHGAP32A7KAX9 2087 aa11.73□□□□□ -0.53
SHANK3-201ENST00000262795 CCDC179H3BU77 68 aa11.73□□□□□ -0.53
SHANK3-201ENST00000262795 UQCRQO14949 82 aa11.73□□□□□ -0.53
SHANK3-201ENST00000262795 MIAQ16674 131 aa11.73□□□□□ -0.53
SHANK3-201ENST00000262795 ZFAND3Q9H8U3 227 aa11.72□□□□□ -0.53
SHANK3-201ENST00000262795 CSPG4Q6UVK1 2322 aa11.72□□□□□ -0.53
SHANK3-201ENST00000262795 LINC00337Q8N6G1 96 aa11.72□□□□□ -0.53
SHANK3-201ENST00000262795 RBX1P62877 108 aa11.71□□□□□ -0.53
SHANK3-201ENST00000262795 LTBP2Q14767 1821 aa11.71□□□□□ -0.53
SHANK3-201ENST00000262795 SRCAPQ6ZRS2 3230 aa11.71□□□□□ -0.54
SHANK3-201ENST00000262795 SOSTDC1Q6X4U4 206 aa11.71□□□□□ -0.54
SHANK3-201ENST00000262795 SPANXB1Q9NS25 103 aaPredicted RBP11.7□□□□□ -0.54
SHANK3-201ENST00000262795 J3QL48 77 aa11.7□□□□□ -0.54
SHANK3-201ENST00000262795 E9PLD3 99 aa11.7□□□□□ -0.54
SHANK3-201ENST00000262795 FAM167A-AS1Q96KT0 104 aa11.7□□□□□ -0.54
SHANK3-201ENST00000262795 SPG11Q96JI7 2443 aa11.7□□□□□ -0.54
SHANK3-201ENST00000262795 Q6ZVQ6 151 aa11.7□□□□□ -0.54
SHANK3-201ENST00000262795 POM121L12Q8N7R1 296 aa11.7□□□□□ -0.54
SHANK3-201ENST00000262795 FAM30AQ9NZY2 134 aa11.69□□□□□ -0.54
SHANK3-201ENST00000262795 HIGD1BQ9P298 99 aa11.69□□□□□ -0.54
SHANK3-201ENST00000262795 IGLV4-69A0A075B6H9 119 aa11.69□□□□□ -0.54
SHANK3-201ENST00000262795 JMJD7-PLA2G4BH0Y9G9 81 aa11.68□□□□□ -0.54
SHANK3-201ENST00000262795 WFDC13Q8IUB5 93 aa11.68□□□□□ -0.54
SHANK3-201ENST00000262795 LELP1Q5T871 98 aa11.68□□□□□ -0.54
SHANK3-201ENST00000262795 C20orf203Q8NBC4 194 aa11.68□□□□□ -0.54
SHANK3-201ENST00000262795 H3BQ85 93 aa11.67□□□□□ -0.54
SHANK3-201ENST00000262795 C1orf229Q6ZS94 237 aaPredicted RBP11.67□□□□□ -0.54
SHANK3-201ENST00000262795 TRBV27A0A0K0K1C4 114 aa11.67□□□□□ -0.54
SHANK3-201ENST00000262795 LINC00474Q9P2X8 69 aa11.67□□□□□ -0.54
SHANK3-201ENST00000262795 LINC00643Q86TS7 51 aa11.67□□□□□ -0.54
SHANK3-201ENST00000262795 C6orf223Q8N319 242 aa11.66□□□□□ -0.54
SHANK3-201ENST00000262795 SERP1Q9Y6X1 66 aa11.66□□□□□ -0.54
SHANK3-201ENST00000262795 A8MZ25 164 aa11.65□□□□□ -0.54
SHANK3-201ENST00000262795 CDKN2A-AS1Q9UH64 79 aa11.65□□□□□ -0.54
SHANK3-201ENST00000262795 SERTAD4-AS1Q5TG53 156 aa11.64□□□□□ -0.55
SHANK3-201ENST00000262795 PCNX3Q9H6A9 2034 aa11.64□□□□□ -0.55
SHANK3-201ENST00000262795 NDUFA7O95182 113 aa11.63□□□□□ -0.55
SHANK3-201ENST00000262795 H3BT86 120 aa11.63□□□□□ -0.55
SHANK3-201ENST00000262795 ATG2AQ2TAZ0 1938 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 119 ms