RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 A0A087WX48 190 aa9.82□□□□□ -0.84
VMP1-201ENST00000262291 TSHBP01222 138 aa9.82□□□□□ -0.84
VMP1-201ENST00000262291 CITED1Q99966 193 aa9.82□□□□□ -0.84
VMP1-201ENST00000262291 C19orf73Q9NVV2 129 aa9.82□□□□□ -0.84
VMP1-201ENST00000262291 TRGV1A0A0A0MS02 117 aa9.81□□□□□ -0.84
VMP1-201ENST00000262291 IGHV3-38A0A0C4DH36 116 aa9.81□□□□□ -0.84
VMP1-201ENST00000262291 A8MWV9 139 aa9.81□□□□□ -0.84
VMP1-201ENST00000262291 NDUFA11Q86Y39 141 aa9.81□□□□□ -0.84
VMP1-201ENST00000262291 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.81□□□□□ -0.84
VMP1-201ENST00000262291 TRRAPQ9Y4A5 3859 aa9.8□□□□□ -0.84
VMP1-201ENST00000262291 ZNF815PA8K554 130 aa9.8□□□□□ -0.84
VMP1-201ENST00000262291 TTC32Q5I0X7 151 aa9.8□□□□□ -0.84
VMP1-201ENST00000262291 TRBV27A0A0K0K1C4 114 aa9.8□□□□□ -0.84
VMP1-201ENST00000262291 RHODO00212 210 aa9.8□□□□□ -0.84
VMP1-201ENST00000262291 SNCGO76070 127 aa9.8□□□□□ -0.84
VMP1-201ENST00000262291 SCGB1C2P0DMR2 95 aa9.8□□□□□ -0.84
VMP1-201ENST00000262291 NEXN-AS1Q8NBZ9 246 aa9.8□□□□□ -0.84
VMP1-201ENST00000262291 Q6ZTI0 123 aa9.79□□□□□ -0.84
VMP1-201ENST00000262291 LINC00482Q8N8I6 264 aa9.79□□□□□ -0.84
VMP1-201ENST00000262291 BEAN1Q3B7T3 259 aa9.79□□□□□ -0.84
VMP1-201ENST00000262291 PRADC1Q9BSG0 188 aa9.79□□□□□ -0.84
VMP1-201ENST00000262291 TRBV6-5A0A0K0K1A5 114 aa9.78□□□□□ -0.84
VMP1-201ENST00000262291 H7C1H1 209 aa9.78□□□□□ -0.84
VMP1-201ENST00000262291 PLNP26678 52 aa9.78□□□□□ -0.84
VMP1-201ENST00000262291 UBE2D3P61077 147 aa9.78□□□□□ -0.84
VMP1-201ENST00000262291 UBE2D2P62837 147 aa9.78□□□□□ -0.84
VMP1-201ENST00000262291 CEMP1Q6PRD7 247 aaPredicted RBP9.78□□□□□ -0.84
VMP1-201ENST00000262291 NOP10Q9NPE3 64 aaKnown RBP9.78□□□□□ -0.84
VMP1-201ENST00000262291 IGIPA6NJ69 53 aa9.77□□□□□ -0.84
VMP1-201ENST00000262291 F8VRH5 84 aa9.77□□□□□ -0.84
VMP1-201ENST00000262291 H7C2G1 150 aa9.77□□□□□ -0.84
VMP1-201ENST00000262291 IFITM1P13164 125 aa9.77□□□□□ -0.84
VMP1-201ENST00000262291 RNASE13Q5GAN3 156 aaKnown RBP9.77□□□□□ -0.84
VMP1-201ENST00000262291 TNFRSF18Q9Y5U5 241 aa9.77□□□□□ -0.84
VMP1-201ENST00000262291 UBE2D1P51668 147 aa9.77□□□□□ -0.85
VMP1-201ENST00000262291 C9JAW5 83 aa9.76□□□□□ -0.85
VMP1-201ENST00000262291 I3L3M4 83 aa9.76□□□□□ -0.85
VMP1-201ENST00000262291 TMEM262E9PQX1 116 aa9.75□□□□□ -0.85
VMP1-201ENST00000262291 SPXQ9BT56 116 aa9.75□□□□□ -0.85
VMP1-201ENST00000262291 TRAV12-1A0A0B4J245 112 aa9.75□□□□□ -0.85
VMP1-201ENST00000262291 SLC25A20O43772 301 aa9.75□□□□□ -0.85
VMP1-201ENST00000262291 MEIG1Q5JSS6 88 aa9.75□□□□□ -0.85
VMP1-201ENST00000262291 PPDPFQ9H3Y8 114 aa9.75□□□□□ -0.85
VMP1-201ENST00000262291 C11orf86A6NJI1 115 aa9.74□□□□□ -0.85
VMP1-201ENST00000262291 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.74□□□□□ -0.85
VMP1-201ENST00000262291 IGKV2-29A2NJV5 120 aaPredicted RBP9.74□□□□□ -0.85
VMP1-201ENST00000262291 RS1O15537 224 aa9.74□□□□□ -0.85
VMP1-201ENST00000262291 NTN5Q8WTR8 489 aaPredicted RBP9.74□□□□□ -0.85
VMP1-201ENST00000262291 LINC00467Q9BRT7 94 aa9.74□□□□□ -0.85
VMP1-201ENST00000262291 C20orf203Q8NBC4 194 aa9.73□□□□□ -0.85
VMP1-201ENST00000262291 IGLV4-69A0A075B6H9 119 aa9.73□□□□□ -0.85
VMP1-201ENST00000262291 CFC1BP0CG36 223 aa9.73□□□□□ -0.85
VMP1-201ENST00000262291 CFC1P0CG37 223 aa9.73□□□□□ -0.85
VMP1-201ENST00000262291 VCX2Q9H322 139 aa9.73□□□□□ -0.85
VMP1-201ENST00000262291 PMVKQ15126 192 aa9.72□□□□□ -0.85
VMP1-201ENST00000262291 ZNRF2Q8NHG8 242 aa9.72□□□□□ -0.85
VMP1-201ENST00000262291 TMEM263Q8WUH6 116 aaKnown RBP9.72□□□□□ -0.85
VMP1-201ENST00000262291 TEX49A0A1B0GTD5 131 aa9.72□□□□□ -0.85
VMP1-201ENST00000262291 CSNK1G2-AS1Q8NCQ2 148 aa9.72□□□□□ -0.85
VMP1-201ENST00000262291 PLAC8L1A1L4L8 177 aa9.71□□□□□ -0.85
VMP1-201ENST00000262291 RHOHQ15669 191 aa9.71□□□□□ -0.85
VMP1-201ENST00000262291 SBSPONQ8IVN8 264 aa9.71□□□□□ -0.85
VMP1-201ENST00000262291 C15orf53Q8NAA6 179 aa9.71□□□□□ -0.85
VMP1-201ENST00000262291 IL17DQ8TAD2 202 aa9.71□□□□□ -0.85
VMP1-201ENST00000262291 IGHV3-64A0A075B6Q5 118 aa9.71□□□□□ -0.86
VMP1-201ENST00000262291 CMC4P56277 68 aaPredicted RBP9.71□□□□□ -0.86
VMP1-201ENST00000262291 TMEM170BQ5T4T1 132 aa9.71□□□□□ -0.86
VMP1-201ENST00000262291 LYRM7Q5U5X0 104 aa9.71□□□□□ -0.86
VMP1-201ENST00000262291 TRGV2A0A075B6R0 118 aa9.7□□□□□ -0.86
VMP1-201ENST00000262291 LOC100131303A0A0U1RQF7 123 aa9.7□□□□□ -0.86
VMP1-201ENST00000262291 TMEM141Q96I45 108 aa9.7□□□□□ -0.86
VMP1-201ENST00000262291 TIMM17AQ99595 171 aa9.7□□□□□ -0.86
VMP1-201ENST00000262291 CHCHD5Q9BSY4 110 aa9.7□□□□□ -0.86
VMP1-201ENST00000262291 IGLV4-3A0A075B6K6 122 aa9.69□□□□□ -0.86
VMP1-201ENST00000262291 C10orf126Q8N4M7 172 aa9.69□□□□□ -0.86
VMP1-201ENST00000262291 M0QXV9 152 aa9.69□□□□□ -0.86
VMP1-201ENST00000262291 CHCHD7Q9BUK0 85 aa9.69□□□□□ -0.86
VMP1-201ENST00000262291 A0A0J9YXV3 536 aa9.69□□□□□ -0.86
VMP1-201ENST00000262291 A0A0J9YY99 117 aa9.69□□□□□ -0.86
VMP1-201ENST00000262291 DEFB4AO15263 64 aa9.69□□□□□ -0.86
VMP1-201ENST00000262291 SLC25A29Q8N8R3 303 aa9.69□□□□□ -0.86
VMP1-201ENST00000262291 DEFB130BP0DP73 79 aa9.68□□□□□ -0.86
VMP1-201ENST00000262291 DEFB130AP0DP74 79 aa9.68□□□□□ -0.86
VMP1-201ENST00000262291 FAM104AQ969W3 186 aa9.68□□□□□ -0.86
VMP1-201ENST00000262291 FBN1P35555 2871 aaKnown RBP9.67□□□□□ -0.86
VMP1-201ENST00000262291 CYSRT1A8MQ03 144 aa9.67□□□□□ -0.86
VMP1-201ENST00000262291 TSPEAR-AS2P59090 65 aa9.67□□□□□ -0.86
VMP1-201ENST00000262291 PIK3CD-AS1Q5SR53 167 aa9.67□□□□□ -0.86
VMP1-201ENST00000262291 C16orf74Q96GX8 76 aa9.67□□□□□ -0.86
VMP1-201ENST00000262291 PRO1854Q9UHT4 67 aa9.67□□□□□ -0.86
VMP1-201ENST00000262291 STAB1Q9NY15 2570 aa9.67□□□□□ -0.86
VMP1-201ENST00000262291 TRAV8-4A0A0B4J246 113 aa9.67□□□□□ -0.86
VMP1-201ENST00000262291 IGHV3-30P01768 117 aa9.66□□□□□ -0.86
VMP1-201ENST00000262291 IGHV3-30-5P0DP03 117 aa9.66□□□□□ -0.86
VMP1-201ENST00000262291 C9orf66Q5T8R8 295 aa9.66□□□□□ -0.86
VMP1-201ENST00000262291 EDA2RQ9HAV5 297 aa9.66□□□□□ -0.86
VMP1-201ENST00000262291 Q1RN00 199 aa9.66□□□□□ -0.86
VMP1-201ENST00000262291 K7EQD1 137 aa9.65□□□□□ -0.86
VMP1-201ENST00000262291 EIF4EBP3O60516 100 aaPredicted RBP9.65□□□□□ -0.86
VMP1-201ENST00000262291 DAZ2Q13117 558 aaKnown RBP9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms