RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 GAGE12FP0CL80 117 aa12.61□□□□□ -0.39
TRAM1-201ENST00000262213 GAGE12GP0CL81 117 aa12.61□□□□□ -0.39
TRAM1-201ENST00000262213 GAGE12IP0CL82 117 aa12.61□□□□□ -0.39
TRAM1-201ENST00000262213 GAGE4Q13068 117 aa12.61□□□□□ -0.39
TRAM1-201ENST00000262213 EDA2RQ9HAV5 297 aa12.61□□□□□ -0.39
TRAM1-201ENST00000262213 TMEM89A2RUT3 159 aa12.6□□□□□ -0.39
TRAM1-201ENST00000262213 IGHV3-53P01767 116 aa12.6□□□□□ -0.39
TRAM1-201ENST00000262213 CIRBPQ14011 172 aaKnown RBP12.6□□□□□ -0.39
TRAM1-201ENST00000262213 UBE2E2Q96LR5 201 aa12.6□□□□□ -0.39
TRAM1-201ENST00000262213 XCL2Q9UBD3 114 aa12.6□□□□□ -0.39
TRAM1-201ENST00000262213 FAM208BQ5VWN6 2430 aa12.6□□□□□ -0.39
TRAM1-201ENST00000262213 DOPEY1Q5JWR5 2465 aa12.59□□□□□ -0.39
TRAM1-201ENST00000262213 NDUFA1O15239 70 aa12.59□□□□□ -0.39
TRAM1-201ENST00000262213 LINC00694P0DN24 101 aa12.59□□□□□ -0.39
TRAM1-201ENST00000262213 LINC00308Q8TCZ7 52 aa12.59□□□□□ -0.39
TRAM1-201ENST00000262213 ZNF702PQ9H963 129 aa12.59□□□□□ -0.39
TRAM1-201ENST00000262213 TLN2Q9Y4G6 2542 aa12.59□□□□□ -0.39
TRAM1-201ENST00000262213 ACACBO00763 2458 aa12.59□□□□□ -0.39
TRAM1-201ENST00000262213 MEIG1Q5JSS6 88 aa12.58□□□□□ -0.39
TRAM1-201ENST00000262213 VPREB3Q9UKI3 123 aa12.58□□□□□ -0.39
TRAM1-201ENST00000262213 RNF152Q8N8N0 203 aa12.58□□□□□ -0.4
TRAM1-201ENST00000262213 C11orf72Q8NBR9 251 aa12.58□□□□□ -0.4
TRAM1-201ENST00000262213 LINC01600Q96MT4 127 aa12.58□□□□□ -0.4
TRAM1-201ENST00000262213 Q8N2B8 174 aa12.58□□□□□ -0.4
TRAM1-201ENST00000262213 LINC01356Q8N9X3 169 aa12.58□□□□□ -0.4
TRAM1-201ENST00000262213 DYNLRB2Q8TF09 96 aa12.58□□□□□ -0.4
TRAM1-201ENST00000262213 MAP6D1Q9H9H5 199 aa12.58□□□□□ -0.4
TRAM1-201ENST00000262213 LINC00242Q5T6M2 205 aa12.57□□□□□ -0.4
TRAM1-201ENST00000262213 C3orf56Q8N813 242 aa12.57□□□□□ -0.4
TRAM1-201ENST00000262213 CHCHD5Q9BSY4 110 aa12.57□□□□□ -0.4
TRAM1-201ENST00000262213 TRGV1A0A0A0MS02 117 aa12.56□□□□□ -0.4
TRAM1-201ENST00000262213 SOSTDC1Q6X4U4 206 aa12.56□□□□□ -0.4
TRAM1-201ENST00000262213 TIMM17BO60830 172 aa12.56□□□□□ -0.4
TRAM1-201ENST00000262213 TIRAPP58753 221 aa12.55□□□□□ -0.4
TRAM1-201ENST00000262213 Q6Q795 121 aa12.55□□□□□ -0.4
TRAM1-201ENST00000262213 PRIMA1Q86XR5 153 aa12.55□□□□□ -0.4
TRAM1-201ENST00000262213 CHD6Q8TD26 2715 aa12.55□□□□□ -0.4
TRAM1-201ENST00000262213 INSP01308 110 aa12.54□□□□□ -0.4
TRAM1-201ENST00000262213 DNAJC30Q96LL9 226 aa12.54□□□□□ -0.4
TRAM1-201ENST00000262213 SETD2Q9BYW2 2564 aaPredicted RBP12.54□□□□□ -0.4
TRAM1-201ENST00000262213 HERVK_113P63121 156 aa12.53□□□□□ -0.4
TRAM1-201ENST00000262213 RS1O15537 224 aa12.53□□□□□ -0.4
TRAM1-201ENST00000262213 JMJD1CQ15652 2540 aa12.53□□□□□ -0.4
TRAM1-201ENST00000262213 IGLV5-45A0A087WSX0 123 aa12.52□□□□□ -0.4
TRAM1-201ENST00000262213 PIK3CD-AS1Q5SR53 167 aa12.52□□□□□ -0.4
TRAM1-201ENST00000262213 SVIPQ8NHG7 77 aa12.52□□□□□ -0.4
TRAM1-201ENST00000262213 SMIM1B2RUZ4 78 aa12.52□□□□□ -0.41
TRAM1-201ENST00000262213 PTPN13Q12923 2485 aa12.52□□□□□ -0.41
TRAM1-201ENST00000262213 SONP18583 2426 aaKnown RBP12.52□□□□□ -0.41
TRAM1-201ENST00000262213 COX7A2LO14548 114 aa12.52□□□□□ -0.41
TRAM1-201ENST00000262213 TEX15Q9BXT5 2789 aa12.51□□□□□ -0.41
TRAM1-201ENST00000262213 C11orf44Q8N8P7 122 aa12.51□□□□□ -0.41
TRAM1-201ENST00000262213 EPG5Q9HCE0 2579 aa12.51□□□□□ -0.41
TRAM1-201ENST00000262213 IGKV3OR2-268A0A0C4DH90 116 aa12.51□□□□□ -0.41
TRAM1-201ENST00000262213 PEMTQ9UBM1 199 aa12.51□□□□□ -0.41
TRAM1-201ENST00000262213 ABCA12Q86UK0 2595 aa12.51□□□□□ -0.41
TRAM1-201ENST00000262213 IGLV5-39A0A0G2JS06 123 aa12.5□□□□□ -0.41
TRAM1-201ENST00000262213 A8MTW9 85 aa12.5□□□□□ -0.41
TRAM1-201ENST00000262213 BEAN1Q3B7T3 259 aa12.5□□□□□ -0.41
TRAM1-201ENST00000262213 Q6YL49 198 aa12.5□□□□□ -0.41
TRAM1-201ENST00000262213 FBN2P35556 2912 aa12.5□□□□□ -0.41
TRAM1-201ENST00000262213 DEFB121Q5J5C9 76 aa12.5□□□□□ -0.41
TRAM1-201ENST00000262213 IGSF10Q6WRI0 2623 aa12.5□□□□□ -0.41
TRAM1-201ENST00000262213 USP24Q9UPU5 2620 aa12.49□□□□□ -0.41
TRAM1-201ENST00000262213 NTM-AS1Q6ZSK4 140 aa12.49□□□□□ -0.41
TRAM1-201ENST00000262213 FAM240AA0A1B0GVK7 77 aa12.49□□□□□ -0.41
TRAM1-201ENST00000262213 Q6ZTI0 123 aa12.49□□□□□ -0.41
TRAM1-201ENST00000262213 DAZ2Q13117 558 aaKnown RBP12.48□□□□□ -0.41
TRAM1-201ENST00000262213 DAZ4Q86SG3 579 aaKnown RBP12.48□□□□□ -0.41
TRAM1-201ENST00000262213 DAZ3Q9NR90 486 aaKnown RBP12.48□□□□□ -0.41
TRAM1-201ENST00000262213 BAALC-AS2P0C853 105 aa12.48□□□□□ -0.41
TRAM1-201ENST00000262213 Q9HAA7 133 aa12.48□□□□□ -0.41
TRAM1-201ENST00000262213 RPL36AP83881 106 aaKnown RBP12.47□□□□□ -0.41
TRAM1-201ENST00000262213 DEFB114Q30KQ6 69 aa12.47□□□□□ -0.41
TRAM1-201ENST00000262213 RPL36ALQ969Q0 106 aaKnown RBP12.47□□□□□ -0.41
TRAM1-201ENST00000262213 FAM218AQ96MZ4 157 aa12.47□□□□□ -0.41
TRAM1-201ENST00000262213 FAM236AA0A1B0GUQ0 79 aa12.47□□□□□ -0.41
TRAM1-201ENST00000262213 FAM236BA0A1B0GV22 79 aa12.47□□□□□ -0.41
TRAM1-201ENST00000262213 A0A1W2PRX2 142 aa12.47□□□□□ -0.41
TRAM1-201ENST00000262213 MRPL23Q16540 153 aaKnown RBP12.47□□□□□ -0.41
TRAM1-201ENST00000262213 SMIM20Q8N5G0 67 aa12.47□□□□□ -0.41
TRAM1-201ENST00000262213 SMCR5Q8TEV8 140 aa12.47□□□□□ -0.41
TRAM1-201ENST00000262213 TOMM7Q9P0U1 55 aa12.47□□□□□ -0.41
TRAM1-201ENST00000262213 LRRK2Q5S007 2527 aa12.47□□□□□ -0.41
TRAM1-201ENST00000262213 STHQ8IWL8 128 aa12.47□□□□□ -0.41
TRAM1-201ENST00000262213 C1orf158Q8N1D5 194 aa12.46□□□□□ -0.41
TRAM1-201ENST00000262213 DSCR9P59020 149 aa12.46□□□□□ -0.42
TRAM1-201ENST00000262213 SHISA2Q6UWI4 295 aa12.46□□□□□ -0.42
TRAM1-201ENST00000262213 NAV2Q8IVL1 2488 aa12.45□□□□□ -0.42
TRAM1-201ENST00000262213 K7EQD1 137 aa12.45□□□□□ -0.42
TRAM1-201ENST00000262213 ODF3L2Q3SX64 289 aa12.45□□□□□ -0.42
TRAM1-201ENST00000262213 Q96MF0 132 aa12.45□□□□□ -0.42
TRAM1-201ENST00000262213 A0A096LNT2 108 aa12.44□□□□□ -0.42
TRAM1-201ENST00000262213 UBE2L6O14933 153 aa12.44□□□□□ -0.42
TRAM1-201ENST00000262213 BBC3Q96PG8 261 aaPredicted RBP12.44□□□□□ -0.42
TRAM1-201ENST00000262213 CDC42SE2Q9NRR3 84 aa12.44□□□□□ -0.42
TRAM1-201ENST00000262213 ZFYVE26Q68DK2 2539 aa12.44□□□□□ -0.42
TRAM1-201ENST00000262213 J3QLI3 93 aa12.43□□□□□ -0.42
TRAM1-201ENST00000262213 TRBV7-7A0A0K0K1E9 115 aa12.43□□□□□ -0.42
TRAM1-201ENST00000262213 F5H768 121 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms