RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 PEMTQ9UBM1 199 aa16.46■□□□□ 0.23
MCF2L-201ENST00000261963 TNFRSF18Q9Y5U5 241 aa16.46■□□□□ 0.23
MCF2L-201ENST00000261963 KHDC1LQ5JSQ8 128 aa16.45■□□□□ 0.22
MCF2L-201ENST00000261963 TMEM126AQ9H061 195 aa16.45■□□□□ 0.22
MCF2L-201ENST00000261963 A0A0J9YXV3 536 aa16.44■□□□□ 0.22
MCF2L-201ENST00000261963 PRSS2P07478 247 aa16.44■□□□□ 0.22
MCF2L-201ENST00000261963 DEFB121Q5J5C9 76 aa16.43■□□□□ 0.22
MCF2L-201ENST00000261963 MAP6D1Q9H9H5 199 aa16.43■□□□□ 0.22
MCF2L-201ENST00000261963 TRBV7-7A0A0K0K1E9 115 aa16.42■□□□□ 0.22
MCF2L-201ENST00000261963 I3L3M4 83 aa16.42■□□□□ 0.22
MCF2L-201ENST00000261963 C20orf203Q8NBC4 194 aa16.42■□□□□ 0.22
MCF2L-201ENST00000261963 LITAFQ99732 161 aa16.41■□□□□ 0.22
MCF2L-201ENST00000261963 IGHV3-73A0A0B4J1V6 119 aa16.41■□□□□ 0.22
MCF2L-201ENST00000261963 PROK1P58294 105 aa16.41■□□□□ 0.22
MCF2L-201ENST00000261963 EDA2RQ9HAV5 297 aa16.41■□□□□ 0.22
MCF2L-201ENST00000261963 CHD6Q8TD26 2715 aa16.41■□□□□ 0.22
MCF2L-201ENST00000261963 ADARB2-AS1A8MUL3 147 aa16.4■□□□□ 0.22
MCF2L-201ENST00000261963 IGHV3-30-3P0DP02 117 aa16.4■□□□□ 0.22
MCF2L-201ENST00000261963 DEFB114Q30KQ6 69 aa16.4■□□□□ 0.22
MCF2L-201ENST00000261963 Q6ZSV7 163 aa16.4■□□□□ 0.22
MCF2L-201ENST00000261963 CCDC168Q8NDH2 2452 aa16.4■□□□□ 0.22
MCF2L-201ENST00000261963 NF1P21359 2839 aa16.4■□□□□ 0.22
MCF2L-201ENST00000261963 DYNLRB2Q8TF09 96 aa16.39■□□□□ 0.21
MCF2L-201ENST00000261963 CLEC2BQ92478 149 aa16.39■□□□□ 0.21
MCF2L-201ENST00000261963 LINC01587Q99440 93 aa16.39■□□□□ 0.21
MCF2L-201ENST00000261963 TIMM21Q9BVV7 248 aa16.39■□□□□ 0.21
MCF2L-201ENST00000261963 TMEM86BQ8N661 226 aa16.39■□□□□ 0.21
MCF2L-201ENST00000261963 TMEM101Q96IK0 257 aa16.39■□□□□ 0.21
MCF2L-201ENST00000261963 SPXQ9BT56 116 aa16.39■□□□□ 0.21
MCF2L-201ENST00000261963 LST1O00453 97 aa16.38■□□□□ 0.21
MCF2L-201ENST00000261963 WFDC11Q8NEX6 87 aa16.38■□□□□ 0.21
MCF2L-201ENST00000261963 SPANXDQ9BXN6 97 aa16.38■□□□□ 0.21
MCF2L-201ENST00000261963 SPANXCQ9NY87 97 aa16.38■□□□□ 0.21
MCF2L-201ENST00000261963 IGLV4-3A0A075B6K6 122 aa16.37■□□□□ 0.21
MCF2L-201ENST00000261963 FLNAP21333 2647 aaKnown RBP16.37■□□□□ 0.21
MCF2L-201ENST00000261963 C3orf56Q8N813 242 aa16.37■□□□□ 0.21
MCF2L-201ENST00000261963 ADAMTSL4-AS1Q5T5F5 129 aa16.36■□□□□ 0.21
MCF2L-201ENST00000261963 Q9UF83 564 aa16.36■□□□□ 0.21
MCF2L-201ENST00000261963 DNAJC9-AS1A6NH13 148 aa16.35■□□□□ 0.21
MCF2L-201ENST00000261963 Q6ZSN1 163 aa16.35■□□□□ 0.21
MCF2L-201ENST00000261963 ZNF415Q09FC8 603 aa16.35■□□□□ 0.21
MCF2L-201ENST00000261963 C11orf72Q8NBR9 251 aa16.35■□□□□ 0.21
MCF2L-201ENST00000261963 NACAE9PAV3 2078 aa16.34■□□□□ 0.21
MCF2L-201ENST00000261963 MIAQ16674 131 aa16.34■□□□□ 0.21
MCF2L-201ENST00000261963 PIK3CD-AS1Q5SR53 167 aa16.34■□□□□ 0.21
MCF2L-201ENST00000261963 FAM104AQ969W3 186 aa16.34■□□□□ 0.21
MCF2L-201ENST00000261963 CUBNO60494 3623 aa16.33■□□□□ 0.2
MCF2L-201ENST00000261963 IMUPQ9GZP8 106 aa16.33■□□□□ 0.2
MCF2L-201ENST00000261963 TENM4Q6N022 2769 aa16.33■□□□□ 0.2
MCF2L-201ENST00000261963 FAM236AA0A1B0GUQ0 79 aa16.33■□□□□ 0.2
MCF2L-201ENST00000261963 FAM236BA0A1B0GV22 79 aa16.33■□□□□ 0.2
MCF2L-201ENST00000261963 LINC00467Q9BRT7 94 aa16.33■□□□□ 0.2
MCF2L-201ENST00000261963 NDUFA12Q9UI09 145 aa16.33■□□□□ 0.2
MCF2L-201ENST00000261963 TRAV8-3A0A0A6YYJ7 113 aa16.32■□□□□ 0.2
MCF2L-201ENST00000261963 ACYP1P07311 99 aa16.32■□□□□ 0.2
MCF2L-201ENST00000261963 NPC2P61916 151 aa16.32■□□□□ 0.2
MCF2L-201ENST00000261963 ESM1Q9NQ30 184 aa16.32■□□□□ 0.2
MCF2L-201ENST00000261963 ANK3Q12955 4377 aaKnown RBP16.32■□□□□ 0.2
MCF2L-201ENST00000261963 CD28P10747 220 aa16.31■□□□□ 0.2
MCF2L-201ENST00000261963 ODF3L2Q3SX64 289 aa16.31■□□□□ 0.2
MCF2L-201ENST00000261963 C11orf44Q8N8P7 122 aa16.31■□□□□ 0.2
MCF2L-201ENST00000261963 IGHV1-58A0A0C4DH39 117 aa16.31■□□□□ 0.2
MCF2L-201ENST00000261963 PPDPFQ9H3Y8 114 aa16.31■□□□□ 0.2
MCF2L-201ENST00000261963 INSP01308 110 aa16.3■□□□□ 0.2
MCF2L-201ENST00000261963 MRPS36P82909 103 aaKnown RBP16.3■□□□□ 0.2
MCF2L-201ENST00000261963 YAE1D1Q9NRH1 226 aa16.3■□□□□ 0.2
MCF2L-201ENST00000261963 PYGO1Q9Y3Y4 419 aa16.3■□□□□ 0.2
MCF2L-201ENST00000261963 HIST2H2BCQ6DN03 193 aa16.29■□□□□ 0.2
MCF2L-201ENST00000261963 SETD2Q9BYW2 2564 aaPredicted RBP16.29■□□□□ 0.2
MCF2L-201ENST00000261963 WNK1Q9H4A3 2382 aa16.29■□□□□ 0.2
MCF2L-201ENST00000261963 A0A1W2PRX2 142 aa16.28■□□□□ 0.2
MCF2L-201ENST00000261963 BEAN1Q3B7T3 259 aa16.28■□□□□ 0.2
MCF2L-201ENST00000261963 KMT2BQ9UMN6 2715 aaPredicted RBP16.27■□□□□ 0.2
MCF2L-201ENST00000261963 CEMP1Q6PRD7 247 aaPredicted RBP16.27■□□□□ 0.2
MCF2L-201ENST00000261963 XCL2Q9UBD3 114 aa16.27■□□□□ 0.19
MCF2L-201ENST00000261963 C9orf153Q5TBE3 101 aa16.26■□□□□ 0.19
MCF2L-201ENST00000261963 CHCHD7Q9BUK0 85 aa16.26■□□□□ 0.19
MCF2L-201ENST00000261963 TRAV25A0A0B4J276 109 aa16.25■□□□□ 0.19
MCF2L-201ENST00000261963 C3orf22Q8N5N4 141 aa16.25■□□□□ 0.19
MCF2L-201ENST00000261963 VSIG2Q96IQ7 327 aa16.25■□□□□ 0.19
MCF2L-201ENST00000261963 CCL24O00175 119 aa16.25■□□□□ 0.19
MCF2L-201ENST00000261963 IGHV3-53P01767 116 aa16.25■□□□□ 0.19
MCF2L-201ENST00000261963 ACANP16112 2415 aa16.25■□□□□ 0.19
MCF2L-201ENST00000261963 NIPBLQ6KC79 2804 aaeCLIP16.24■□□□□ 0.19
MCF2L-201ENST00000261963 RS1O15537 224 aa16.24■□□□□ 0.19
MCF2L-201ENST00000261963 LINC00694P0DN24 101 aa16.23■□□□□ 0.19
MCF2L-201ENST00000261963 KRTAP1-1Q07627 177 aa16.23■□□□□ 0.19
MCF2L-201ENST00000261963 C1orf158Q8N1D5 194 aa16.23■□□□□ 0.19
MCF2L-201ENST00000261963 DNAJC30Q96LL9 226 aa16.23■□□□□ 0.19
MCF2L-201ENST00000261963 PDZD2O15018 2839 aa16.23■□□□□ 0.19
MCF2L-201ENST00000261963 A8MZ25 164 aa16.23■□□□□ 0.19
MCF2L-201ENST00000261963 NDUFA7O95182 113 aa16.23■□□□□ 0.19
MCF2L-201ENST00000261963 RNASE13Q5GAN3 156 aaKnown RBP16.22■□□□□ 0.19
MCF2L-201ENST00000261963 LINC00643Q86TS7 51 aa16.22■□□□□ 0.19
MCF2L-201ENST00000261963 TIMM17BO60830 172 aa16.21■□□□□ 0.19
MCF2L-201ENST00000261963 STHQ8IWL8 128 aa16.21■□□□□ 0.19
MCF2L-201ENST00000261963 MTORP42345 2549 aa16.21■□□□□ 0.19
MCF2L-201ENST00000261963 UQCRQO14949 82 aa16.21■□□□□ 0.19
MCF2L-201ENST00000261963 CITED2Q99967 270 aaPredicted RBP16.21■□□□□ 0.19
MCF2L-201ENST00000261963 UBE2D4Q9Y2X8 147 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 186.3 ms