RNA–Protein interactions for RNA: ENST00000261707.7

SLC6A4-201, Transcript of solute carrier family 6 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A4, Length 6,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-201ENST00000261707 Q8N7P7 452 aa8.01□□□□□ -1.13
SLC6A4-201ENST00000261707 AKAP6Q13023 2319 aa8.01□□□□□ -1.13
SLC6A4-201ENST00000261707 TSHBP01222 138 aa8□□□□□ -1.13
SLC6A4-201ENST00000261707 NANOS2P60321 138 aaKnown RBP7.99□□□□□ -1.13
SLC6A4-201ENST00000261707 Q6ZTI0 123 aa7.99□□□□□ -1.13
SLC6A4-201ENST00000261707 POM121L12Q8N7R1 296 aa7.99□□□□□ -1.13
SLC6A4-201ENST00000261707 CELA1Q9UNI1 258 aa7.99□□□□□ -1.13
SLC6A4-201ENST00000261707 MAP6D1Q9H9H5 199 aa7.99□□□□□ -1.13
SLC6A4-201ENST00000261707 URB1-AS1Q96HZ7 61 aa7.99□□□□□ -1.13
SLC6A4-201ENST00000261707 C1orf229Q6ZS94 237 aaPredicted RBP7.98□□□□□ -1.13
SLC6A4-201ENST00000261707 C19orf84I3L1E1 186 aa7.98□□□□□ -1.13
SLC6A4-201ENST00000261707 CRIP3Q6Q6R5 217 aa7.98□□□□□ -1.13
SLC6A4-201ENST00000261707 SPTBN2O15020 2390 aa7.97□□□□□ -1.13
SLC6A4-201ENST00000261707 SPTA1P02549 2419 aa7.97□□□□□ -1.13
SLC6A4-201ENST00000261707 TRBV7-6A0A0J9YX20 115 aa7.97□□□□□ -1.13
SLC6A4-201ENST00000261707 GAS8-AS1O95177 125 aa7.97□□□□□ -1.13
SLC6A4-201ENST00000261707 XAGE1AQ9HD64 81 aa7.97□□□□□ -1.13
SLC6A4-201ENST00000261707 TMEM89A2RUT3 159 aa7.97□□□□□ -1.13
SLC6A4-201ENST00000261707 PROK1P58294 105 aa7.97□□□□□ -1.13
SLC6A4-201ENST00000261707 CDIP1Q9H305 208 aa7.97□□□□□ -1.13
SLC6A4-201ENST00000261707 Q6YL49 198 aa7.97□□□□□ -1.13
SLC6A4-201ENST00000261707 Q8NA96 180 aa7.96□□□□□ -1.13
SLC6A4-201ENST00000261707 C1orf134Q5TEV5 83 aa7.96□□□□□ -1.14
SLC6A4-201ENST00000261707 DYSFO75923 2080 aa7.95□□□□□ -1.14
SLC6A4-201ENST00000261707 IGLV9-49A0A0B4J1Y8 123 aa7.95□□□□□ -1.14
SLC6A4-201ENST00000261707 NTM-AS1Q6ZSK4 140 aa7.95□□□□□ -1.14
SLC6A4-201ENST00000261707 IGHV4-30-4P0DP06 118 aa7.94□□□□□ -1.14
SLC6A4-201ENST00000261707 C4orf26Q17RF5 130 aa7.94□□□□□ -1.14
SLC6A4-201ENST00000261707 OXLD1Q5BKU9 147 aa7.94□□□□□ -1.14
SLC6A4-201ENST00000261707 PLXNB3Q9ULL4 1909 aa7.94□□□□□ -1.14
SLC6A4-201ENST00000261707 TRBV6-8A0A0A6YYG3 113 aa7.94□□□□□ -1.14
SLC6A4-201ENST00000261707 TRBV7-7A0A0K0K1E9 115 aa7.94□□□□□ -1.14
SLC6A4-201ENST00000261707 MGAMO43451 1857 aa7.94□□□□□ -1.14
SLC6A4-201ENST00000261707 SMR3AQ99954 134 aa7.94□□□□□ -1.14
SLC6A4-201ENST00000261707 LINC00574Q9H8X3 128 aa7.94□□□□□ -1.14
SLC6A4-201ENST00000261707 DHRS4-AS1Q9P1J3 65 aa7.94□□□□□ -1.14
SLC6A4-201ENST00000261707 LINC00474Q9P2X8 69 aa7.93□□□□□ -1.14
SLC6A4-201ENST00000261707 COL4A3Q01955 1670 aa7.93□□□□□ -1.14
SLC6A4-201ENST00000261707 CADP27708 2225 aa7.93□□□□□ -1.14
SLC6A4-201ENST00000261707 DSCAML1Q8TD84 2053 aa7.93□□□□□ -1.14
SLC6A4-201ENST00000261707 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.93□□□□□ -1.14
SLC6A4-201ENST00000261707 Q6ZSV7 163 aa7.93□□□□□ -1.14
SLC6A4-201ENST00000261707 POLEQ07864 2286 aa7.93□□□□□ -1.14
SLC6A4-201ENST00000261707 FAM229AH3BQW9 127 aa7.93□□□□□ -1.14
SLC6A4-201ENST00000261707 A0A087WYN8 130 aa7.93□□□□□ -1.14
SLC6A4-201ENST00000261707 TANC1Q9C0D5 1861 aa7.92□□□□□ -1.14
SLC6A4-201ENST00000261707 ATRXP46100 2492 aa7.92□□□□□ -1.14
SLC6A4-201ENST00000261707 LINC00208Q96KT6 92 aa7.92□□□□□ -1.14
SLC6A4-201ENST00000261707 SHANK1Q9Y566 2161 aa7.92□□□□□ -1.14
SLC6A4-201ENST00000261707 M0R378 163 aa7.92□□□□□ -1.14
SLC6A4-201ENST00000261707 RNASE3P12724 160 aaKnown RBP7.92□□□□□ -1.14
SLC6A4-201ENST00000261707 POLR2KP53803 58 aaKnown RBP7.92□□□□□ -1.14
SLC6A4-201ENST00000261707 IGKV2-28A0A075B6P5 120 aa7.92□□□□□ -1.14
SLC6A4-201ENST00000261707 IGKV2D-28P01615 120 aa7.92□□□□□ -1.14
SLC6A4-201ENST00000261707 DENND4CQ5VZ89 1909 aa7.92□□□□□ -1.14
SLC6A4-201ENST00000261707 Q8N3U1 123 aa7.92□□□□□ -1.14
SLC6A4-201ENST00000261707 X6R8D5 127 aa7.92□□□□□ -1.14
SLC6A4-201ENST00000261707 NCOR1O75376 2440 aa7.92□□□□□ -1.14
SLC6A4-201ENST00000261707 A6NDX4 124 aa7.92□□□□□ -1.14
SLC6A4-201ENST00000261707 SPTBN1Q01082 2364 aaKnown RBP7.92□□□□□ -1.14
SLC6A4-201ENST00000261707 PLAC8L1A1L4L8 177 aa7.91□□□□□ -1.14
SLC6A4-201ENST00000261707 IGFL2Q6UWQ7 119 aa7.91□□□□□ -1.14
SLC6A4-201ENST00000261707 Q8N814 137 aa7.91□□□□□ -1.14
SLC6A4-201ENST00000261707 C11orf21Q9P2W6 132 aa7.91□□□□□ -1.14
SLC6A4-201ENST00000261707 LTBP1Q14766 1721 aa7.91□□□□□ -1.14
SLC6A4-201ENST00000261707 IGLV4-69A0A075B6H9 119 aa7.91□□□□□ -1.14
SLC6A4-201ENST00000261707 IGIPA6NJ69 53 aa7.91□□□□□ -1.14
SLC6A4-201ENST00000261707 K7EQG2 157 aa7.91□□□□□ -1.14
SLC6A4-201ENST00000261707 BEAN1Q3B7T3 259 aa7.91□□□□□ -1.14
SLC6A4-201ENST00000261707 MSMPQ1L6U9 139 aa7.91□□□□□ -1.14
SLC6A4-201ENST00000261707 CIRBP-AS1Q8TBR5 109 aa7.91□□□□□ -1.14
SLC6A4-201ENST00000261707 TNFRSF13BO14836 293 aaPredicted RBP7.9□□□□□ -1.14
SLC6A4-201ENST00000261707 RPL28P46779 137 aaKnown RBP7.9□□□□□ -1.14
SLC6A4-201ENST00000261707 ZNF73O43830 326 aaPredicted RBP7.9□□□□□ -1.14
SLC6A4-201ENST00000261707 COX17Q14061 63 aa7.9□□□□□ -1.14
SLC6A4-201ENST00000261707 ODF3BA8MYP8 253 aa7.9□□□□□ -1.14
SLC6A4-201ENST00000261707 TSPEAR-AS2P59090 65 aa7.9□□□□□ -1.14
SLC6A4-201ENST00000261707 SERTAD4-AS1Q5TG53 156 aa7.9□□□□□ -1.14
SLC6A4-201ENST00000261707 PRR9Q5T870 116 aa7.9□□□□□ -1.15
SLC6A4-201ENST00000261707 CEP290O15078 2479 aa7.89□□□□□ -1.15
SLC6A4-201ENST00000261707 CACNA1EQ15878 2313 aa7.89□□□□□ -1.15
SLC6A4-201ENST00000261707 Q6ZVQ6 151 aa7.89□□□□□ -1.15
SLC6A4-201ENST00000261707 ESRGQ1W209 222 aa7.89□□□□□ -1.15
SLC6A4-201ENST00000261707 TMEM254Q8TBM7 123 aa7.89□□□□□ -1.15
SLC6A4-201ENST00000261707 TRBV6-4A0A1B0GX49 114 aa7.89□□□□□ -1.15
SLC6A4-201ENST00000261707 KPRPQ5T749 579 aaPredicted RBP7.89□□□□□ -1.15
SLC6A4-201ENST00000261707 ABCA1O95477 2261 aa7.88□□□□□ -1.15
SLC6A4-201ENST00000261707 CNFNQ9BYD5 112 aa7.88□□□□□ -1.15
SLC6A4-201ENST00000261707 NHLRC4P0CG21 123 aaPredicted RBP7.88□□□□□ -1.15
SLC6A4-201ENST00000261707 THSD7BQ9C0I4 1608 aa7.88□□□□□ -1.15
SLC6A4-201ENST00000261707 CD164L2Q6UWJ8 174 aa7.88□□□□□ -1.15
SLC6A4-201ENST00000261707 ZNF407Q9C0G0 2248 aa7.88□□□□□ -1.15
SLC6A4-201ENST00000261707 USF3Q68DE3 2245 aa7.87□□□□□ -1.15
SLC6A4-201ENST00000261707 LINC00959A0A1B0GUT2 108 aa7.87□□□□□ -1.15
SLC6A4-201ENST00000261707 CRYGAP11844 174 aa7.87□□□□□ -1.15
SLC6A4-201ENST00000261707 RPS28P62857 69 aaKnown RBP7.87□□□□□ -1.15
SLC6A4-201ENST00000261707 LY6LH3BQJ8 138 aa7.87□□□□□ -1.15
SLC6A4-201ENST00000261707 ZGRF1Q86YA3 2104 aa7.87□□□□□ -1.15
SLC6A4-201ENST00000261707 ACACAQ13085 2346 aa7.86□□□□□ -1.15
SLC6A4-201ENST00000261707 VPREB1P12018 145 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms