RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 PYGO1Q9Y3Y4 419 aa11.56□□□□□ -0.56
LMNB1-201ENST00000261366 TINCRA0A1B0GVN0 87 aa11.55□□□□□ -0.56
LMNB1-201ENST00000261366 TMEM101Q96IK0 257 aa11.55□□□□□ -0.56
LMNB1-201ENST00000261366 ZNF462Q96JM2 2506 aa11.55□□□□□ -0.56
LMNB1-201ENST00000261366 TRAV13-1A0A0B4J241 112 aa11.55□□□□□ -0.56
LMNB1-201ENST00000261366 PRB1P04280 392 aa11.54□□□□□ -0.56
LMNB1-201ENST00000261366 CFHR3Q02985 330 aa11.54□□□□□ -0.56
LMNB1-201ENST00000261366 Q6Q795 121 aa11.54□□□□□ -0.56
LMNB1-201ENST00000261366 BRI3O95415 125 aa11.54□□□□□ -0.56
LMNB1-201ENST00000261366 FBN2P35556 2912 aa11.54□□□□□ -0.56
LMNB1-201ENST00000261366 HOXD3P31249 432 aaPredicted RBP11.53□□□□□ -0.56
LMNB1-201ENST00000261366 PTPN13Q12923 2485 aa11.53□□□□□ -0.56
LMNB1-201ENST00000261366 YAE1D1Q9NRH1 226 aa11.53□□□□□ -0.56
LMNB1-201ENST00000261366 C18orf65Q6ZTR6 163 aa11.53□□□□□ -0.56
LMNB1-201ENST00000261366 LRRK2Q5S007 2527 aa11.53□□□□□ -0.56
LMNB1-201ENST00000261366 DEFB112Q30KQ8 113 aa11.53□□□□□ -0.56
LMNB1-201ENST00000261366 LINC01587Q99440 93 aa11.53□□□□□ -0.56
LMNB1-201ENST00000261366 CHD6Q8TD26 2715 aa11.52□□□□□ -0.56
LMNB1-201ENST00000261366 USP24Q9UPU5 2620 aa11.52□□□□□ -0.56
LMNB1-201ENST00000261366 RS1O15537 224 aa11.52□□□□□ -0.57
LMNB1-201ENST00000261366 LINC00308Q8TCZ7 52 aa11.52□□□□□ -0.57
LMNB1-201ENST00000261366 C10orf105Q8TEF2 133 aa11.52□□□□□ -0.57
LMNB1-201ENST00000261366 NIPBLQ6KC79 2804 aaeCLIP11.52□□□□□ -0.57
LMNB1-201ENST00000261366 RBMY1BA6NDE4 496 aaKnown RBP11.52□□□□□ -0.57
LMNB1-201ENST00000261366 RBMY1EA6NEQ0 496 aaKnown RBP11.52□□□□□ -0.57
LMNB1-201ENST00000261366 IGHV3-53P01767 116 aa11.52□□□□□ -0.57
LMNB1-201ENST00000261366 MSMBP08118 114 aa11.52□□□□□ -0.57
LMNB1-201ENST00000261366 RBMY1DP0C7P1 496 aaKnown RBP11.52□□□□□ -0.57
LMNB1-201ENST00000261366 SLURP1P55000 103 aa11.51□□□□□ -0.57
LMNB1-201ENST00000261366 CIRBPQ14011 172 aaKnown RBP11.51□□□□□ -0.57
LMNB1-201ENST00000261366 SOSTDC1Q6X4U4 206 aa11.51□□□□□ -0.57
LMNB1-201ENST00000261366 SMCR5Q8TEV8 140 aa11.51□□□□□ -0.57
LMNB1-201ENST00000261366 PIK3CD-AS1Q5SR53 167 aa11.5□□□□□ -0.57
LMNB1-201ENST00000261366 Q9HAA7 133 aa11.5□□□□□ -0.57
LMNB1-201ENST00000261366 SPANXA1Q9NS26 97 aa11.5□□□□□ -0.57
LMNB1-201ENST00000261366 KHDC1LQ5JSQ8 128 aa11.5□□□□□ -0.57
LMNB1-201ENST00000261366 EPG5Q9HCE0 2579 aa11.5□□□□□ -0.57
LMNB1-201ENST00000261366 LINC00694P0DN24 101 aa11.5□□□□□ -0.57
LMNB1-201ENST00000261366 DAZ2Q13117 558 aaKnown RBP11.5□□□□□ -0.57
LMNB1-201ENST00000261366 DAZ4Q86SG3 579 aaKnown RBP11.5□□□□□ -0.57
LMNB1-201ENST00000261366 PRIMA1Q86XR5 153 aa11.5□□□□□ -0.57
LMNB1-201ENST00000261366 DAZ3Q9NR90 486 aaKnown RBP11.5□□□□□ -0.57
LMNB1-201ENST00000261366 SONP18583 2426 aaKnown RBP11.49□□□□□ -0.57
LMNB1-201ENST00000261366 IGKV3OR2-268A0A0C4DH90 116 aa11.48□□□□□ -0.57
LMNB1-201ENST00000261366 NDUFA1O15239 70 aa11.48□□□□□ -0.57
LMNB1-201ENST00000261366 UBE2E2Q96LR5 201 aa11.47□□□□□ -0.57
LMNB1-201ENST00000261366 FAM218AQ96MZ4 157 aa11.47□□□□□ -0.57
LMNB1-201ENST00000261366 XCL2Q9UBD3 114 aa11.47□□□□□ -0.57
LMNB1-201ENST00000261366 BAALC-AS2P0C853 105 aa11.46□□□□□ -0.57
LMNB1-201ENST00000261366 ZNF415Q09FC8 603 aa11.46□□□□□ -0.57
LMNB1-201ENST00000261366 LINC00242Q5T6M2 205 aa11.46□□□□□ -0.57
LMNB1-201ENST00000261366 GAGE2AQ6NT46 116 aa11.46□□□□□ -0.57
LMNB1-201ENST00000261366 LINC01600Q96MT4 127 aa11.46□□□□□ -0.57
LMNB1-201ENST00000261366 ANKRD17O75179 2603 aaKnown RBP11.46□□□□□ -0.58
LMNB1-201ENST00000261366 COX7A2LO14548 114 aa11.46□□□□□ -0.58
LMNB1-201ENST00000261366 FAM240AA0A1B0GVK7 77 aa11.45□□□□□ -0.58
LMNB1-201ENST00000261366 NF1P21359 2839 aa11.45□□□□□ -0.58
LMNB1-201ENST00000261366 BBC3Q96PG8 261 aaPredicted RBP11.45□□□□□ -0.58
LMNB1-201ENST00000261366 ABCA12Q86UK0 2595 aa11.44□□□□□ -0.58
LMNB1-201ENST00000261366 FAM110AQ9BQ89 295 aa11.44□□□□□ -0.58
LMNB1-201ENST00000261366 TOMM7Q9P0U1 55 aa11.44□□□□□ -0.58
LMNB1-201ENST00000261366 KLK5Q9Y337 293 aaPredicted RBP11.44□□□□□ -0.58
LMNB1-201ENST00000261366 TRGV1A0A0A0MS02 117 aa11.43□□□□□ -0.58
LMNB1-201ENST00000261366 TRBV7-7A0A0K0K1E9 115 aa11.43□□□□□ -0.58
LMNB1-201ENST00000261366 TEX15Q9BXT5 2789 aa11.43□□□□□ -0.58
LMNB1-201ENST00000261366 DEFB121Q5J5C9 76 aa11.43□□□□□ -0.58
LMNB1-201ENST00000261366 NAV2Q8IVL1 2488 aa11.43□□□□□ -0.58
LMNB1-201ENST00000261366 SMIM1B2RUZ4 78 aa11.42□□□□□ -0.58
LMNB1-201ENST00000261366 MRPL23Q16540 153 aaKnown RBP11.42□□□□□ -0.58
LMNB1-201ENST00000261366 C9orf153Q5TBE3 101 aa11.42□□□□□ -0.58
LMNB1-201ENST00000261366 TIMM17BO60830 172 aa11.42□□□□□ -0.58
LMNB1-201ENST00000261366 TIRAPP58753 221 aa11.41□□□□□ -0.58
LMNB1-201ENST00000261366 PPDPFQ9H3Y8 114 aa11.41□□□□□ -0.58
LMNB1-201ENST00000261366 HERVK_113P63121 156 aa11.41□□□□□ -0.58
LMNB1-201ENST00000261366 B4DSR2 109 aa11.4□□□□□ -0.58
LMNB1-201ENST00000261366 AKAP9Q99996 3911 aa11.4□□□□□ -0.58
LMNB1-201ENST00000261366 C11orf72Q8NBR9 251 aa11.4□□□□□ -0.58
LMNB1-201ENST00000261366 C11orf44Q8N8P7 122 aa11.39□□□□□ -0.59
LMNB1-201ENST00000261366 TMEM89A2RUT3 159 aa11.38□□□□□ -0.59
LMNB1-201ENST00000261366 DYNLRB2Q8TF09 96 aa11.38□□□□□ -0.59
LMNB1-201ENST00000261366 IGLV5-39A0A0G2JS06 123 aa11.38□□□□□ -0.59
LMNB1-201ENST00000261366 MAP6D1Q9H9H5 199 aa11.38□□□□□ -0.59
LMNB1-201ENST00000261366 IGLV5-45A0A087WSX0 123 aa11.38□□□□□ -0.59
LMNB1-201ENST00000261366 ATP5G1P05496 136 aa11.38□□□□□ -0.59
LMNB1-201ENST00000261366 C9orf129Q5T035 196 aaKnown RBP11.38□□□□□ -0.59
LMNB1-201ENST00000261366 NTM-AS1Q6ZSK4 140 aa11.38□□□□□ -0.59
LMNB1-201ENST00000261366 Q96MF0 132 aa11.38□□□□□ -0.59
LMNB1-201ENST00000261366 EDA2RQ9HAV5 297 aa11.38□□□□□ -0.59
LMNB1-201ENST00000261366 FN1P02751 2386 aaKnown RBP11.37□□□□□ -0.59
LMNB1-201ENST00000261366 LINC00643Q86TS7 51 aa11.37□□□□□ -0.59
LMNB1-201ENST00000261366 C22orf24Q9Y442 160 aa11.37□□□□□ -0.59
LMNB1-201ENST00000261366 LOC107984640A0A0U1RRK4 108 aa11.37□□□□□ -0.59
LMNB1-201ENST00000261366 SDIM1Q6ZPB5 146 aa11.37□□□□□ -0.59
LMNB1-201ENST00000261366 CCDC168Q8NDH2 2452 aa11.36□□□□□ -0.59
LMNB1-201ENST00000261366 Q6ZTI0 123 aa11.36□□□□□ -0.59
LMNB1-201ENST00000261366 C11orf68Q9H3H3 251 aaKnown RBP11.36□□□□□ -0.59
LMNB1-201ENST00000261366 UBR5O95071 2799 aaPredicted RBP11.36□□□□□ -0.59
LMNB1-201ENST00000261366 IGKV3D-7A0A0C4DH55 119 aa11.36□□□□□ -0.59
LMNB1-201ENST00000261366 INSP01308 110 aa11.36□□□□□ -0.59
LMNB1-201ENST00000261366 ACYP1P07311 99 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms