RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 HIGD2AQ9BW72 106 aa5.41□□□□□ -1.54
GPNMB-201ENST00000258733 VCANP13611 3396 aa5.41□□□□□ -1.54
GPNMB-201ENST00000258733 K7EQD1 137 aa5.41□□□□□ -1.54
GPNMB-201ENST00000258733 HAMPP81172 84 aa5.41□□□□□ -1.54
GPNMB-201ENST00000258733 URB1O60287 2271 aaKnown RBP5.41□□□□□ -1.54
GPNMB-201ENST00000258733 JMJD7-PLA2G4BH0Y9G9 81 aa5.4□□□□□ -1.54
GPNMB-201ENST00000258733 RPL39LQ96EH5 51 aaKnown RBP5.4□□□□□ -1.54
GPNMB-201ENST00000258733 FAM186AA6NE01 2351 aa5.4□□□□□ -1.55
GPNMB-201ENST00000258733 A0A087WYN8 130 aa5.4□□□□□ -1.55
GPNMB-201ENST00000258733 PRB1P04280 392 aa5.4□□□□□ -1.55
GPNMB-201ENST00000258733 RPL39P62891 51 aaKnown RBP5.4□□□□□ -1.55
GPNMB-201ENST00000258733 ERHP84090 104 aaKnown RBP5.4□□□□□ -1.55
GPNMB-201ENST00000258733 FAM27BQ5VT28 67 aa5.4□□□□□ -1.55
GPNMB-201ENST00000258733 MAP6D1Q9H9H5 199 aa5.4□□□□□ -1.55
GPNMB-201ENST00000258733 CDC42SE2Q9NRR3 84 aa5.4□□□□□ -1.55
GPNMB-201ENST00000258733 RNF223E7ERA6 249 aa5.39□□□□□ -1.55
GPNMB-201ENST00000258733 IGHV3-9P01782 118 aa5.39□□□□□ -1.55
GPNMB-201ENST00000258733 FBXL19-AS1Q494R0 122 aa5.39□□□□□ -1.55
GPNMB-201ENST00000258733 LINC00308Q8TCZ7 52 aa5.39□□□□□ -1.55
GPNMB-201ENST00000258733 ORMDL1Q9P0S3 153 aa5.39□□□□□ -1.55
GPNMB-201ENST00000258733 SEC16AO15027 2179 aa5.39□□□□□ -1.55
GPNMB-201ENST00000258733 GPR179Q6PRD1 2367 aa5.39□□□□□ -1.55
GPNMB-201ENST00000258733 GYPEP15421 78 aa5.39□□□□□ -1.55
GPNMB-201ENST00000258733 LPAL2Q16609 132 aa5.39□□□□□ -1.55
GPNMB-201ENST00000258733 RPL39P5Q59GN2 51 aa5.39□□□□□ -1.55
GPNMB-201ENST00000258733 LEAP2Q969E1 77 aa5.39□□□□□ -1.55
GPNMB-201ENST00000258733 SDK1Q7Z5N4 2213 aa5.39□□□□□ -1.55
GPNMB-201ENST00000258733 SPTY2D1-AS1A0A0U1RR47 76 aa5.38□□□□□ -1.55
GPNMB-201ENST00000258733 Q8N9P0 234 aaPredicted RBP5.38□□□□□ -1.55
GPNMB-201ENST00000258733 ASH1LQ9NR48 2969 aaKnown RBP5.38□□□□□ -1.55
GPNMB-201ENST00000258733 CYSRT1A8MQ03 144 aa5.38□□□□□ -1.55
GPNMB-201ENST00000258733 CACNA1GO43497 2377 aa5.38□□□□□ -1.55
GPNMB-201ENST00000258733 F5H697 171 aa5.37□□□□□ -1.55
GPNMB-201ENST00000258733 IGHV1-69P01742 117 aa5.37□□□□□ -1.55
GPNMB-201ENST00000258733 DEFB126Q9BYW3 111 aa5.37□□□□□ -1.55
GPNMB-201ENST00000258733 MYO15AQ9UKN7 3530 aa5.37□□□□□ -1.55
GPNMB-201ENST00000258733 IGHV4-4A0A075B6R2 117 aa5.37□□□□□ -1.55
GPNMB-201ENST00000258733 TRBV10-1A0A0K0K1A3 114 aa5.37□□□□□ -1.55
GPNMB-201ENST00000258733 PPP1R17O96001 155 aa5.37□□□□□ -1.55
GPNMB-201ENST00000258733 ZNF32P17041 273 aa5.37□□□□□ -1.55
GPNMB-201ENST00000258733 GNLYP22749 145 aa5.37□□□□□ -1.55
GPNMB-201ENST00000258733 Q6ZTI0 123 aa5.37□□□□□ -1.55
GPNMB-201ENST00000258733 RPL36ALQ969Q0 106 aaKnown RBP5.37□□□□□ -1.55
GPNMB-201ENST00000258733 OCR1Q9BZK8 76 aa5.37□□□□□ -1.55
GPNMB-201ENST00000258733 ZFHX2Q9C0A1 2572 aaPredicted RBP5.37□□□□□ -1.55
GPNMB-201ENST00000258733 NAV3Q8IVL0 2385 aa5.37□□□□□ -1.55
GPNMB-201ENST00000258733 IGKV2-40A0A087WW87 121 aaPredicted RBP5.37□□□□□ -1.55
GPNMB-201ENST00000258733 IGKV2D-40P01614 121 aaPredicted RBP5.37□□□□□ -1.55
GPNMB-201ENST00000258733 PLA2G1BP04054 148 aaKnown RBP5.37□□□□□ -1.55
GPNMB-201ENST00000258733 SPINK2P20155 84 aa5.37□□□□□ -1.55
GPNMB-201ENST00000258733 Q8TAT8 98 aa5.37□□□□□ -1.55
GPNMB-201ENST00000258733 ACACBO00763 2458 aa5.36□□□□□ -1.55
GPNMB-201ENST00000258733 H0YGX0 51 aa5.36□□□□□ -1.55
GPNMB-201ENST00000258733 LYZP61626 148 aa5.36□□□□□ -1.55
GPNMB-201ENST00000258733 ADM2Q7Z4H4 148 aa5.36□□□□□ -1.55
GPNMB-201ENST00000258733 LINC00476Q8WZB0 136 aa5.36□□□□□ -1.55
GPNMB-201ENST00000258733 MAP1BP46821 2468 aaKnown RBP5.36□□□□□ -1.55
GPNMB-201ENST00000258733 IGKV2-29A2NJV5 120 aaPredicted RBP5.36□□□□□ -1.55
GPNMB-201ENST00000258733 LECT2O14960 151 aa5.36□□□□□ -1.55
GPNMB-201ENST00000258733 PATE1Q8WXA2 126 aa5.36□□□□□ -1.55
GPNMB-201ENST00000258733 CHCHD10Q8WYQ3 142 aaPredicted RBP5.36□□□□□ -1.55
GPNMB-201ENST00000258733 IGHV7-4-1A0A0J9YVY3 117 aa5.35□□□□□ -1.55
GPNMB-201ENST00000258733 FSHBP01225 129 aa5.35□□□□□ -1.55
GPNMB-201ENST00000258733 PRB3Q04118 309 aaPredicted RBP5.35□□□□□ -1.55
GPNMB-201ENST00000258733 C9orf106Q8NAJ2 232 aa5.35□□□□□ -1.55
GPNMB-201ENST00000258733 KRTAP21-3Q3LHN1 58 aa5.35□□□□□ -1.55
GPNMB-201ENST00000258733 ZFAND3Q9H8U3 227 aa5.35□□□□□ -1.55
GPNMB-201ENST00000258733 MGAQ8IWI9 3026 aa5.35□□□□□ -1.55
GPNMB-201ENST00000258733 ZNF292O60281 2723 aa5.35□□□□□ -1.55
GPNMB-201ENST00000258733 IGKV3D-20A0A0C4DH25 116 aa5.34□□□□□ -1.55
GPNMB-201ENST00000258733 LOC101927531A0A1B0GV80 90 aa5.34□□□□□ -1.55
GPNMB-201ENST00000258733 RPL36AP83881 106 aaKnown RBP5.34□□□□□ -1.55
GPNMB-201ENST00000258733 CASC2Q6XLA1 102 aa5.34□□□□□ -1.55
GPNMB-201ENST00000258733 NDUFA4L2Q9NRX3 87 aa5.34□□□□□ -1.55
GPNMB-201ENST00000258733 SETXQ7Z333 2677 aaKnown RBP5.34□□□□□ -1.55
GPNMB-201ENST00000258733 TRIOO75962 3097 aa5.34□□□□□ -1.56
GPNMB-201ENST00000258733 LMO4P61968 165 aa5.34□□□□□ -1.56
GPNMB-201ENST00000258733 PDE6HQ13956 83 aa5.34□□□□□ -1.56
GPNMB-201ENST00000258733 Q8N814 137 aa5.34□□□□□ -1.56
GPNMB-201ENST00000258733 C20orf203Q8NBC4 194 aa5.34□□□□□ -1.56
GPNMB-201ENST00000258733 SND1-IT1Q9HBX3 110 aa5.34□□□□□ -1.56
GPNMB-201ENST00000258733 GVINP1Q7Z2Y8 2422 aa5.33□□□□□ -1.56
GPNMB-201ENST00000258733 LINC01565O15544 149 aa5.33□□□□□ -1.56
GPNMB-201ENST00000258733 SLPIP03973 132 aa5.33□□□□□ -1.56
GPNMB-201ENST00000258733 IGHV1-8P0DP01 117 aa5.33□□□□□ -1.56
GPNMB-201ENST00000258733 DEFB110Q30KQ9 67 aa5.33□□□□□ -1.56
GPNMB-201ENST00000258733 C9orf47Q6ZRZ4 202 aa5.33□□□□□ -1.56
GPNMB-201ENST00000258733 SPEGQ15772 3267 aa5.33□□□□□ -1.56
GPNMB-201ENST00000258733 IGHV1-18A0A0C4DH31 117 aa5.33□□□□□ -1.56
GPNMB-201ENST00000258733 IGLV1-51P01701 117 aa5.33□□□□□ -1.56
GPNMB-201ENST00000258733 S4R3C0 116 aa5.33□□□□□ -1.56
GPNMB-201ENST00000258733 MGPP08493 103 aa5.32□□□□□ -1.56
GPNMB-201ENST00000258733 WT1-ASQ06250 92 aa5.32□□□□□ -1.56
GPNMB-201ENST00000258733 GGNQ86UU5 652 aa5.32□□□□□ -1.56
GPNMB-201ENST00000258733 CRPP02741 224 aa5.32□□□□□ -1.56
GPNMB-201ENST00000258733 PRB2P02812 416 aaPredicted RBP5.32□□□□□ -1.56
GPNMB-201ENST00000258733 ASB16-AS1Q495Z4 193 aa5.32□□□□□ -1.56
GPNMB-201ENST00000258733 ATP1A1-AS1Q5TC04 95 aa5.32□□□□□ -1.56
GPNMB-201ENST00000258733 DEFB104AQ8WTQ1 72 aa5.32□□□□□ -1.56
GPNMB-201ENST00000258733 CACNA1HO95180 2353 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms