RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 GYPEP15421 78 aa6.53□□□□□ -1.36
CKAP2-201ENST00000258607 ETDBQ3ZM63 59 aa6.53□□□□□ -1.36
CKAP2-201ENST00000258607 FAM222AQ5U5X8 452 aa6.53□□□□□ -1.36
CKAP2-201ENST00000258607 TMEM141Q96I45 108 aa6.53□□□□□ -1.36
CKAP2-201ENST00000258607 IGLV4-69A0A075B6H9 119 aa6.52□□□□□ -1.37
CKAP2-201ENST00000258607 IGHV4-4A0A075B6R2 117 aa6.52□□□□□ -1.37
CKAP2-201ENST00000258607 IGIPA6NJ69 53 aa6.52□□□□□ -1.37
CKAP2-201ENST00000258607 BRI3O95415 125 aa6.52□□□□□ -1.37
CKAP2-201ENST00000258607 COX6A2Q02221 97 aa6.52□□□□□ -1.37
CKAP2-201ENST00000258607 CEND1Q8N111 149 aa6.52□□□□□ -1.37
CKAP2-201ENST00000258607 OR5A1Q8NGJ0 315 aa6.52□□□□□ -1.37
CKAP2-201ENST00000258607 TMEM238LA0A1B0GVL6 79 aa6.52□□□□□ -1.37
CKAP2-201ENST00000258607 PPP1R17O96001 155 aa6.52□□□□□ -1.37
CKAP2-201ENST00000258607 C12orf74Q32Q52 190 aa6.52□□□□□ -1.37
CKAP2-201ENST00000258607 C11orf72Q8NBR9 251 aa6.52□□□□□ -1.37
CKAP2-201ENST00000258607 WFDC2Q14508 124 aa6.51□□□□□ -1.37
CKAP2-201ENST00000258607 SAMD13Q5VXD3 122 aa6.51□□□□□ -1.37
CKAP2-201ENST00000258607 TRBV7-3A0A075B6L6 115 aa6.51□□□□□ -1.37
CKAP2-201ENST00000258607 TRBV27A0A0K0K1C4 114 aa6.51□□□□□ -1.37
CKAP2-201ENST00000258607 NDUFA12Q9UI09 145 aa6.51□□□□□ -1.37
CKAP2-201ENST00000258607 A4D1N5 150 aa6.51□□□□□ -1.37
CKAP2-201ENST00000258607 EIF4EBP3O60516 100 aaPredicted RBP6.51□□□□□ -1.37
CKAP2-201ENST00000258607 IGHV3-30-3P0DP02 117 aa6.51□□□□□ -1.37
CKAP2-201ENST00000258607 ZNF22P17026 224 aaPredicted RBP6.51□□□□□ -1.37
CKAP2-201ENST00000258607 IGLV1-51P01701 117 aa6.5□□□□□ -1.37
CKAP2-201ENST00000258607 GIG44P09565 113 aaPredicted RBP6.5□□□□□ -1.37
CKAP2-201ENST00000258607 PRIMA1Q86XR5 153 aa6.5□□□□□ -1.37
CKAP2-201ENST00000258607 MUSTN1Q8IVN3 82 aa6.5□□□□□ -1.37
CKAP2-201ENST00000258607 Q9H8V8 135 aa6.5□□□□□ -1.37
CKAP2-201ENST00000258607 IGLV4-60A0A075B6I1 120 aa6.49□□□□□ -1.37
CKAP2-201ENST00000258607 TRAV26-1A0A087WT03 109 aa6.49□□□□□ -1.37
CKAP2-201ENST00000258607 A0A1B0GWB2 263 aa6.49□□□□□ -1.37
CKAP2-201ENST00000258607 K7EQD1 137 aa6.49□□□□□ -1.37
CKAP2-201ENST00000258607 Q8N2B8 174 aa6.49□□□□□ -1.37
CKAP2-201ENST00000258607 RHODO00212 210 aa6.49□□□□□ -1.37
CKAP2-201ENST00000258607 NTM-AS1Q6ZSK4 140 aa6.49□□□□□ -1.37
CKAP2-201ENST00000258607 TMEM263Q8WUH6 116 aaKnown RBP6.49□□□□□ -1.37
CKAP2-201ENST00000258607 A0A1W2PPM0 123 aa6.49□□□□□ -1.37
CKAP2-201ENST00000258607 C9orf118A6NHY6 69 aa6.49□□□□□ -1.37
CKAP2-201ENST00000258607 SEC11AP67812 179 aa6.49□□□□□ -1.37
CKAP2-201ENST00000258607 KLK9Q2XQG4 91 aa6.49□□□□□ -1.37
CKAP2-201ENST00000258607 IGHV3-30P01768 117 aa6.48□□□□□ -1.37
CKAP2-201ENST00000258607 IGHV3-33P01772 117 aa6.48□□□□□ -1.37
CKAP2-201ENST00000258607 IGHV3-30-5P0DP03 117 aa6.48□□□□□ -1.37
CKAP2-201ENST00000258607 DAD1P61803 113 aa6.48□□□□□ -1.37
CKAP2-201ENST00000258607 PIK3CD-AS1Q5SR53 167 aa6.48□□□□□ -1.37
CKAP2-201ENST00000258607 GTF2H5Q6ZYL4 71 aa6.48□□□□□ -1.37
CKAP2-201ENST00000258607 CELA1Q9UNI1 258 aa6.48□□□□□ -1.37
CKAP2-201ENST00000258607 ANGP03950 147 aaKnown RBP6.48□□□□□ -1.37
CKAP2-201ENST00000258607 OR13C6PQ8NH95 151 aa6.48□□□□□ -1.37
CKAP2-201ENST00000258607 VSIG2Q96IQ7 327 aa6.48□□□□□ -1.37
CKAP2-201ENST00000258607 E9PLD3 99 aa6.48□□□□□ -1.37
CKAP2-201ENST00000258607 INSL3P51460 131 aa6.48□□□□□ -1.37
CKAP2-201ENST00000258607 RNF152Q8N8N0 203 aa6.48□□□□□ -1.37
CKAP2-201ENST00000258607 FHL3Q13643 280 aa6.47□□□□□ -1.37
CKAP2-201ENST00000258607 ADAMTSL4-AS1Q5T5F5 129 aa6.47□□□□□ -1.37
CKAP2-201ENST00000258607 TEX29Q8N6K0 151 aa6.47□□□□□ -1.37
CKAP2-201ENST00000258607 CHCHD7Q9BUK0 85 aa6.47□□□□□ -1.37
CKAP2-201ENST00000258607 PAX4O43316 350 aa6.47□□□□□ -1.37
CKAP2-201ENST00000258607 LINC00158P58513 81 aa6.47□□□□□ -1.37
CKAP2-201ENST00000258607 C2orf82Q6UX34 121 aa6.47□□□□□ -1.37
CKAP2-201ENST00000258607 C10orf126Q8N4M7 172 aa6.47□□□□□ -1.37
CKAP2-201ENST00000258607 TEX48A0A1B0GUV7 120 aa6.46□□□□□ -1.37
CKAP2-201ENST00000258607 IGLL5B9A064 214 aa6.46□□□□□ -1.37
CKAP2-201ENST00000258607 TMEM86BQ8N661 226 aa6.46□□□□□ -1.37
CKAP2-201ENST00000258607 TMEM101Q96IK0 257 aa6.46□□□□□ -1.37
CKAP2-201ENST00000258607 TMEM243Q9BU79 118 aa6.46□□□□□ -1.37
CKAP2-201ENST00000258607 NFE4Q86UQ8 179 aa6.46□□□□□ -1.38
CKAP2-201ENST00000258607 UBE2D4Q9Y2X8 147 aa6.46□□□□□ -1.38
CKAP2-201ENST00000258607 IGHV4-28A0A0C4DH34 117 aa6.46□□□□□ -1.38
CKAP2-201ENST00000258607 IGHV4-30-4P0DP06 118 aa6.46□□□□□ -1.38
CKAP2-201ENST00000258607 MED14OSP0DP75 135 aa6.46□□□□□ -1.38
CKAP2-201ENST00000258607 ZMAT4Q9H898 229 aa6.45□□□□□ -1.38
CKAP2-201ENST00000258607 Q9HAA7 133 aa6.45□□□□□ -1.38
CKAP2-201ENST00000258607 H3BRM9 83 aa6.45□□□□□ -1.38
CKAP2-201ENST00000258607 CLEC2BQ92478 149 aa6.45□□□□□ -1.38
CKAP2-201ENST00000258607 PRSS47A8MTI9 375 aa6.44□□□□□ -1.38
CKAP2-201ENST00000258607 G3V4G9 280 aa6.44□□□□□ -1.38
CKAP2-201ENST00000258607 C1QTNF4Q9BXJ3 329 aa6.44□□□□□ -1.38
CKAP2-201ENST00000258607 TRBV7-9A0A0J9YWB2 115 aa6.44□□□□□ -1.38
CKAP2-201ENST00000258607 PCP4P48539 62 aa6.44□□□□□ -1.38
CKAP2-201ENST00000258607 LINC00269Q8N2A0 174 aa6.44□□□□□ -1.38
CKAP2-201ENST00000258607 TIMM17AQ99595 171 aa6.44□□□□□ -1.38
CKAP2-201ENST00000258607 TRAV12-1A0A0B4J245 112 aa6.44□□□□□ -1.38
CKAP2-201ENST00000258607 C9JAW5 83 aa6.44□□□□□ -1.38
CKAP2-201ENST00000258607 C9orf116Q5BN46 136 aaPredicted RBP6.44□□□□□ -1.38
CKAP2-201ENST00000258607 ODF3Q96PU9 254 aa6.44□□□□□ -1.38
CKAP2-201ENST00000258607 GTSF1LQ9H1H1 148 aa6.44□□□□□ -1.38
CKAP2-201ENST00000258607 PRR3P79522 188 aaKnown RBP6.43□□□□□ -1.38
CKAP2-201ENST00000258607 KRTAP24-1Q3LI83 254 aa6.43□□□□□ -1.38
CKAP2-201ENST00000258607 OCIAD2Q56VL3 154 aa6.43□□□□□ -1.38
CKAP2-201ENST00000258607 C16orf74Q96GX8 76 aa6.43□□□□□ -1.38
CKAP2-201ENST00000258607 C19orf73Q9NVV2 129 aa6.43□□□□□ -1.38
CKAP2-201ENST00000258607 KLK12Q9UKR0 248 aa6.43□□□□□ -1.38
CKAP2-201ENST00000258607 A0A0J9YXY3 114 aa6.43□□□□□ -1.38
CKAP2-201ENST00000258607 RHOHQ15669 191 aa6.43□□□□□ -1.38
CKAP2-201ENST00000258607 ATP6V0E2Q8NHE4 81 aa6.43□□□□□ -1.38
CKAP2-201ENST00000258607 TMEM223A0PJW6 202 aa6.43□□□□□ -1.38
CKAP2-201ENST00000258607 K7EP34 96 aa6.43□□□□□ -1.38
CKAP2-201ENST00000258607 RS1O15537 224 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms