RNA–Protein interactions for RNA: ENST00000255465.6

CCNA1-201, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-201ENST00000255465 XCL1P47992 114 aa8.77□□□□□ -1.01
CCNA1-201ENST00000255465 ZNF80P51504 273 aaPredicted RBP8.77□□□□□ -1.01
CCNA1-201ENST00000255465 MIAQ16674 131 aa8.77□□□□□ -1.01
CCNA1-201ENST00000255465 NSUN5P1Q3KNT7 163 aa8.77□□□□□ -1.01
CCNA1-201ENST00000255465 Q6ZRU5 148 aa8.77□□□□□ -1.01
CCNA1-201ENST00000255465 OVOL2Q9BRP0 275 aa8.77□□□□□ -1.01
CCNA1-201ENST00000255465 XCL2Q9UBD3 114 aa8.77□□□□□ -1.01
CCNA1-201ENST00000255465 SPRY2O43597 315 aa8.77□□□□□ -1.01
CCNA1-201ENST00000255465 H7BZZ5 65 aa8.76□□□□□ -1.01
CCNA1-201ENST00000255465 TRGV3P03979 118 aa8.76□□□□□ -1.01
CCNA1-201ENST00000255465 PRSS2P07478 247 aa8.76□□□□□ -1.01
CCNA1-201ENST00000255465 KLKP1Q107X0 134 aa8.76□□□□□ -1.01
CCNA1-201ENST00000255465 KRTAP21-3Q3LHN1 58 aa8.76□□□□□ -1.01
CCNA1-201ENST00000255465 C17orf77Q96MU5 243 aa8.76□□□□□ -1.01
CCNA1-201ENST00000255465 FANCD2OSQ96PS1 177 aa8.76□□□□□ -1.01
CCNA1-201ENST00000255465 LITAFQ99732 161 aa8.76□□□□□ -1.01
CCNA1-201ENST00000255465 KLK15Q9H2R5 256 aa8.76□□□□□ -1.01
CCNA1-201ENST00000255465 TMEM89A2RUT3 159 aa8.75□□□□□ -1.01
CCNA1-201ENST00000255465 FAM223BA6NKX1 122 aa8.75□□□□□ -1.01
CCNA1-201ENST00000255465 BAALC-AS2P0C853 105 aa8.75□□□□□ -1.01
CCNA1-201ENST00000255465 LY6G5BQ8NDX9 201 aa8.75□□□□□ -1.01
CCNA1-201ENST00000255465 NF1P21359 2839 aa8.75□□□□□ -1.01
CCNA1-201ENST00000255465 TRBV7-6A0A0J9YX20 115 aa8.74□□□□□ -1.01
CCNA1-201ENST00000255465 E7EUB6 86 aa8.74□□□□□ -1.01
CCNA1-201ENST00000255465 DNAL4O96015 105 aa8.74□□□□□ -1.01
CCNA1-201ENST00000255465 MXRA5Q9NR99 2828 aa8.74□□□□□ -1.01
CCNA1-201ENST00000255465 CUBNO60494 3623 aa8.74□□□□□ -1.01
CCNA1-201ENST00000255465 TRAV26-2A0A0B4J265 109 aa8.74□□□□□ -1.01
CCNA1-201ENST00000255465 IGHV7-4-1A0A0J9YVY3 117 aa8.74□□□□□ -1.01
CCNA1-201ENST00000255465 TSHBP01222 138 aa8.74□□□□□ -1.01
CCNA1-201ENST00000255465 FSHBP01225 129 aa8.74□□□□□ -1.01
CCNA1-201ENST00000255465 IGHV3-48P01763 117 aa8.74□□□□□ -1.01
CCNA1-201ENST00000255465 MED14OSP0DP75 135 aa8.74□□□□□ -1.01
CCNA1-201ENST00000255465 BEAN1Q3B7T3 259 aa8.74□□□□□ -1.01
CCNA1-201ENST00000255465 JMJD1CQ15652 2540 aa8.74□□□□□ -1.01
CCNA1-201ENST00000255465 FBN3Q75N90 2809 aa8.73□□□□□ -1.01
CCNA1-201ENST00000255465 A0A0U1RQV1 116 aa8.73□□□□□ -1.01
CCNA1-201ENST00000255465 GHRHP01286 108 aa8.73□□□□□ -1.01
CCNA1-201ENST00000255465 IGLV2-23P01705 113 aa8.73□□□□□ -1.01
CCNA1-201ENST00000255465 SPANXN1Q5VSR9 72 aa8.73□□□□□ -1.01
CCNA1-201ENST00000255465 TRAV7A0A075B6U4 112 aa8.72□□□□□ -1.01
CCNA1-201ENST00000255465 IGKV2-40A0A087WW87 121 aaPredicted RBP8.72□□□□□ -1.01
CCNA1-201ENST00000255465 A8MZ25 164 aa8.72□□□□□ -1.01
CCNA1-201ENST00000255465 IGKV2D-40P01614 121 aaPredicted RBP8.72□□□□□ -1.01
CCNA1-201ENST00000255465 RPL27AP46776 148 aaKnown RBP8.72□□□□□ -1.01
CCNA1-201ENST00000255465 IL17DQ8TAD2 202 aa8.72□□□□□ -1.01
CCNA1-201ENST00000255465 PLAC8L1A1L4L8 177 aa8.72□□□□□ -1.01
CCNA1-201ENST00000255465 IGKV1-17P01599 117 aa8.72□□□□□ -1.01
CCNA1-201ENST00000255465 FAM223AQ8IWN6 122 aa8.72□□□□□ -1.01
CCNA1-201ENST00000255465 LINC00482Q8N8I6 264 aa8.72□□□□□ -1.01
CCNA1-201ENST00000255465 IGHV4OR15-8A0A075B7B6 117 aa8.71□□□□□ -1.01
CCNA1-201ENST00000255465 A0A087WW49 117 aa8.71□□□□□ -1.01
CCNA1-201ENST00000255465 I3L2K1 104 aa8.71□□□□□ -1.01
CCNA1-201ENST00000255465 IGHV4-38-2P0DP08 117 aa8.71□□□□□ -1.01
CCNA1-201ENST00000255465 OBSCN-AS1Q96MR7 158 aa8.71□□□□□ -1.01
CCNA1-201ENST00000255465 IGKV3D-20A0A0C4DH25 116 aa8.7□□□□□ -1.02
CCNA1-201ENST00000255465 NXPH4O95158 308 aa8.7□□□□□ -1.02
CCNA1-201ENST00000255465 CCKP06307 115 aa8.7□□□□□ -1.02
CCNA1-201ENST00000255465 ZFAND3Q9H8U3 227 aa8.7□□□□□ -1.02
CCNA1-201ENST00000255465 M0R1W7 72 aa8.7□□□□□ -1.02
CCNA1-201ENST00000255465 VMO1Q7Z5L0 202 aa8.7□□□□□ -1.02
CCNA1-201ENST00000255465 LEAP2Q969E1 77 aa8.7□□□□□ -1.02
CCNA1-201ENST00000255465 TNCP24821 2201 aa8.69□□□□□ -1.02
CCNA1-201ENST00000255465 VCYO14598 125 aa8.69□□□□□ -1.02
CCNA1-201ENST00000255465 CCL3L1P16619 93 aa8.69□□□□□ -1.02
CCNA1-201ENST00000255465 C10orf55Q5SWW7 151 aa8.69□□□□□ -1.02
CCNA1-201ENST00000255465 C20orf197Q8N268 126 aa8.69□□□□□ -1.02
CCNA1-201ENST00000255465 MRPL53Q96EL3 112 aaKnown RBP8.69□□□□□ -1.02
CCNA1-201ENST00000255465 PRB3Q04118 309 aaPredicted RBP8.68□□□□□ -1.02
CCNA1-201ENST00000255465 BRD3OSQ6XYD6 125 aa8.68□□□□□ -1.02
CCNA1-201ENST00000255465 C22orf24Q9Y442 160 aa8.68□□□□□ -1.02
CCNA1-201ENST00000255465 IGKV3D-7A0A0C4DH55 119 aa8.68□□□□□ -1.02
CCNA1-201ENST00000255465 RUSC1-AS1Q66K80 236 aa8.68□□□□□ -1.02
CCNA1-201ENST00000255465 HCP5Q6MZN7 132 aa8.68□□□□□ -1.02
CCNA1-201ENST00000255465 LYPD5Q6UWN5 251 aa8.68□□□□□ -1.02
CCNA1-201ENST00000255465 IBA57-AS1B1ANH7 110 aa8.67□□□□□ -1.02
CCNA1-201ENST00000255465 MRGPRG-AS1Q2M3A8 158 aa8.67□□□□□ -1.02
CCNA1-201ENST00000255465 RETNQ9HD89 108 aa8.67□□□□□ -1.02
CCNA1-201ENST00000255465 LENEPQ9Y5L5 61 aa8.67□□□□□ -1.02
CCNA1-201ENST00000255465 POLR2KP53803 58 aaKnown RBP8.66□□□□□ -1.02
CCNA1-201ENST00000255465 Q8TAT8 98 aa8.66□□□□□ -1.02
CCNA1-201ENST00000255465 TRAV13-2A0A0B4J235 113 aa8.66□□□□□ -1.02
CCNA1-201ENST00000255465 GPHB5Q86YW7 130 aa8.66□□□□□ -1.02
CCNA1-201ENST00000255465 TRBV6-5A0A0K0K1A5 114 aa8.65□□□□□ -1.02
CCNA1-201ENST00000255465 PF4P02776 101 aa8.64□□□□□ -1.03
CCNA1-201ENST00000255465 IGHV1-8P0DP01 117 aa8.64□□□□□ -1.03
CCNA1-201ENST00000255465 IGHV3-30-3P0DP02 117 aa8.64□□□□□ -1.03
CCNA1-201ENST00000255465 HILS1P60008 231 aa8.64□□□□□ -1.03
CCNA1-201ENST00000255465 RBM3P98179 157 aaKnown RBP8.64□□□□□ -1.03
CCNA1-201ENST00000255465 DEFB112Q30KQ8 113 aa8.64□□□□□ -1.03
CCNA1-201ENST00000255465 LINC00846Q9NV44 126 aa8.64□□□□□ -1.03
CCNA1-201ENST00000255465 A0A087WVE0 104 aa8.64□□□□□ -1.03
CCNA1-201ENST00000255465 IGHV1-58A0A0C4DH39 117 aa8.64□□□□□ -1.03
CCNA1-201ENST00000255465 TRBV27A0A0K0K1C4 114 aa8.64□□□□□ -1.03
CCNA1-201ENST00000255465 RPL39LQ96EH5 51 aaKnown RBP8.64□□□□□ -1.03
CCNA1-201ENST00000255465 ESM1Q9NQ30 184 aa8.64□□□□□ -1.03
CCNA1-201ENST00000255465 NDUFA12Q9UI09 145 aa8.64□□□□□ -1.03
CCNA1-201ENST00000255465 TEX22C9J3V5 150 aa8.63□□□□□ -1.03
CCNA1-201ENST00000255465 COX7A1P24310 79 aa8.63□□□□□ -1.03
CCNA1-201ENST00000255465 SAA4P35542 130 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms