RNA–Protein interactions for RNA: ENST00000246672.3

NR1D1-201, Transcript of nuclear receptor subfamily 1 group D member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NR1D1, Length 2,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1D1-201ENST00000246672 KLRB1Q12918 225 aa9.04□□□□□ -0.96
NR1D1-201ENST00000246672 OR13C6PQ8NH95 151 aa9.04□□□□□ -0.96
NR1D1-201ENST00000246672 VPS13CQ709C8 3753 aa9.03□□□□□ -0.96
NR1D1-201ENST00000246672 K7ENP7 123 aa9.03□□□□□ -0.96
NR1D1-201ENST00000246672 IGLV1-40P01703 118 aa9.03□□□□□ -0.96
NR1D1-201ENST00000246672 PRM2P04554 102 aa9.03□□□□□ -0.96
NR1D1-201ENST00000246672 IGHV4-38-2P0DP08 117 aa9.03□□□□□ -0.96
NR1D1-201ENST00000246672 LINC00467Q9BRT7 94 aa9.03□□□□□ -0.96
NR1D1-201ENST00000246672 INAFM2P0DMQ5 153 aa9.03□□□□□ -0.96
NR1D1-201ENST00000246672 SNRPD3P62318 126 aaKnown RBP9.03□□□□□ -0.96
NR1D1-201ENST00000246672 COX6A2Q02221 97 aa9.03□□□□□ -0.96
NR1D1-201ENST00000246672 IGHV3-38A0A0C4DH36 116 aa9.02□□□□□ -0.96
NR1D1-201ENST00000246672 RBMY1A1P0DJD3 496 aaKnown RBP9.02□□□□□ -0.96
NR1D1-201ENST00000246672 RBMY1CP0DJD4 496 aa9.02□□□□□ -0.96
NR1D1-201ENST00000246672 HOXD3P31249 432 aaPredicted RBP9.02□□□□□ -0.96
NR1D1-201ENST00000246672 RBMY1FQ15415 496 aaKnown RBP9.02□□□□□ -0.96
NR1D1-201ENST00000246672 NACAE9PAV3 2078 aa9.02□□□□□ -0.97
NR1D1-201ENST00000246672 Q6ZSN1 163 aa9.02□□□□□ -0.97
NR1D1-201ENST00000246672 DPH3Q96FX2 82 aa9.02□□□□□ -0.97
NR1D1-201ENST00000246672 IGKV3D-7A0A0C4DH55 119 aa9.01□□□□□ -0.97
NR1D1-201ENST00000246672 RPL18AQ02543 176 aaKnown RBP9.01□□□□□ -0.97
NR1D1-201ENST00000246672 FAM222AQ5U5X8 452 aa9.01□□□□□ -0.97
NR1D1-201ENST00000246672 A6NDX4 124 aa9.01□□□□□ -0.97
NR1D1-201ENST00000246672 K7EQG2 157 aa9.01□□□□□ -0.97
NR1D1-201ENST00000246672 OXTP01178 125 aa9.01□□□□□ -0.97
NR1D1-201ENST00000246672 MALP21145 153 aa9.01□□□□□ -0.97
NR1D1-201ENST00000246672 C9orf129Q5T035 196 aaKnown RBP9.01□□□□□ -0.97
NR1D1-201ENST00000246672 IGLV5-45A0A087WSX0 123 aa9□□□□□ -0.97
NR1D1-201ENST00000246672 A0A087WVE0 104 aa9□□□□□ -0.97
NR1D1-201ENST00000246672 C10orf99Q6UWK7 81 aa9□□□□□ -0.97
NR1D1-201ENST00000246672 DSCR8Q96T75 97 aa9□□□□□ -0.97
NR1D1-201ENST00000246672 PIK3CD-AS1Q5SR53 167 aa8.99□□□□□ -0.97
NR1D1-201ENST00000246672 PRIMA1Q86XR5 153 aa8.99□□□□□ -0.97
NR1D1-201ENST00000246672 IGLV5-39A0A0G2JS06 123 aa8.99□□□□□ -0.97
NR1D1-201ENST00000246672 CFHR3Q02985 330 aa8.99□□□□□ -0.97
NR1D1-201ENST00000246672 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.98□□□□□ -0.972e-6■■□□□ 14.1
NR1D1-201ENST00000246672 WIPF1O43516 503 aa8.98□□□□□ -0.97
NR1D1-201ENST00000246672 UPK3BQ9BT76 320 aa8.98□□□□□ -0.97
NR1D1-201ENST00000246672 C14orf132Q9NPU4 83 aa8.98□□□□□ -0.97
NR1D1-201ENST00000246672 IGHV3OR16-12A0A075B7B8 117 aa8.98□□□□□ -0.97
NR1D1-201ENST00000246672 DNAL4O96015 105 aa8.98□□□□□ -0.97
NR1D1-201ENST00000246672 TMEM258P61165 79 aa8.98□□□□□ -0.97
NR1D1-201ENST00000246672 SERP2Q8N6R1 65 aa8.98□□□□□ -0.97
NR1D1-201ENST00000246672 TRAV25A0A0B4J276 109 aa8.97□□□□□ -0.97
NR1D1-201ENST00000246672 LINC00242Q5T6M2 205 aa8.97□□□□□ -0.97
NR1D1-201ENST00000246672 SPG11Q96JI7 2443 aa8.97□□□□□ -0.97
NR1D1-201ENST00000246672 C4orf26Q17RF5 130 aa8.97□□□□□ -0.97
NR1D1-201ENST00000246672 HIST2H2BCQ6DN03 193 aa8.97□□□□□ -0.97
NR1D1-201ENST00000246672 HIST2H2BDQ6DRA6 164 aa8.97□□□□□ -0.97
NR1D1-201ENST00000246672 DGAT2L7PQ6IED9 249 aa8.97□□□□□ -0.97
NR1D1-201ENST00000246672 LINC00846Q9NV44 126 aa8.97□□□□□ -0.97
NR1D1-201ENST00000246672 SYNJ2BPP57105 145 aa8.96□□□□□ -0.97
NR1D1-201ENST00000246672 CRYBG3Q68DQ2 2970 aa8.96□□□□□ -0.97
NR1D1-201ENST00000246672 IGHV4-61A0A0C4DH41 118 aa8.96□□□□□ -0.98
NR1D1-201ENST00000246672 SMIM1B2RUZ4 78 aa8.96□□□□□ -0.98
NR1D1-201ENST00000246672 LINC01561Q8N1V8 128 aa8.96□□□□□ -0.98
NR1D1-201ENST00000246672 COPS9Q8WXC6 57 aa8.96□□□□□ -0.98
NR1D1-201ENST00000246672 PSMB8P28062 276 aa8.95□□□□□ -0.98
NR1D1-201ENST00000246672 A0A087WYN8 130 aa8.95□□□□□ -0.98
NR1D1-201ENST00000246672 USP17L23D6RBM5 183 aa8.95□□□□□ -0.98
NR1D1-201ENST00000246672 RNF152Q8N8N0 203 aa8.95□□□□□ -0.98
NR1D1-201ENST00000246672 RPL28P46779 137 aaKnown RBP8.94□□□□□ -0.98
NR1D1-201ENST00000246672 Q6JHZ5 121 aa8.94□□□□□ -0.98
NR1D1-201ENST00000246672 HIVEP3Q5T1R4 2406 aa8.94□□□□□ -0.98
NR1D1-201ENST00000246672 PIMREGQ9BSJ6 248 aa8.94□□□□□ -0.98
NR1D1-201ENST00000246672 PRORYQ9H606 182 aa8.94□□□□□ -0.98
NR1D1-201ENST00000246672 HRCT1Q6UXD1 115 aa8.93□□□□□ -0.98
NR1D1-201ENST00000246672 LINC00337Q8N6G1 96 aa8.93□□□□□ -0.98
NR1D1-201ENST00000246672 Q5XG85 94 aa8.93□□□□□ -0.98
NR1D1-201ENST00000246672 CREBBPQ92793 2442 aa8.92□□□□□ -0.98
NR1D1-201ENST00000246672 ZNF415Q09FC8 603 aa8.92□□□□□ -0.98
NR1D1-201ENST00000246672 RBMY1BA6NDE4 496 aaKnown RBP8.92□□□□□ -0.98
NR1D1-201ENST00000246672 RBMY1EA6NEQ0 496 aaKnown RBP8.92□□□□□ -0.98
NR1D1-201ENST00000246672 RBMY1DP0C7P1 496 aaKnown RBP8.92□□□□□ -0.98
NR1D1-201ENST00000246672 CRPP02741 224 aa8.91□□□□□ -0.98
NR1D1-201ENST00000246672 DEFB131AP59861 70 aa8.91□□□□□ -0.98
NR1D1-201ENST00000246672 IGKV2-28A0A075B6P5 120 aa8.91□□□□□ -0.98
NR1D1-201ENST00000246672 TRAV13-2A0A0B4J235 113 aa8.91□□□□□ -0.98
NR1D1-201ENST00000246672 IGKV2D-28P01615 120 aa8.91□□□□□ -0.98
NR1D1-201ENST00000246672 CENPEQ02224 2701 aa8.91□□□□□ -0.98
NR1D1-201ENST00000246672 IGHV3-53P01767 116 aa8.9□□□□□ -0.98
NR1D1-201ENST00000246672 SMIM11BQ8TCY0 68 aa8.9□□□□□ -0.98
NR1D1-201ENST00000246672 CSPG4Q6UVK1 2322 aa8.9□□□□□ -0.98
NR1D1-201ENST00000246672 NCR3O14931 201 aa8.9□□□□□ -0.98
NR1D1-201ENST00000246672 F5H768 121 aa8.9□□□□□ -0.99
NR1D1-201ENST00000246672 C19orf84I3L1E1 186 aa8.9□□□□□ -0.99
NR1D1-201ENST00000246672 AVPP01185 164 aa8.9□□□□□ -0.99
NR1D1-201ENST00000246672 FHL2Q14192 279 aa8.9□□□□□ -0.99
NR1D1-201ENST00000246672 OBSCN-AS1Q96MR7 158 aa8.9□□□□□ -0.99
NR1D1-201ENST00000246672 PF4P02776 101 aa8.89□□□□□ -0.99
NR1D1-201ENST00000246672 MIR7-3HGQ8N6C7 128 aa8.89□□□□□ -0.99
NR1D1-201ENST00000246672 Q96MF0 132 aa8.89□□□□□ -0.99
NR1D1-201ENST00000246672 IGHV4-59P01825 116 aa8.88□□□□□ -0.99
NR1D1-201ENST00000246672 HILS1P60008 231 aa8.88□□□□□ -0.99
NR1D1-201ENST00000246672 C10orf105Q8TEF2 133 aa8.88□□□□□ -0.99
NR1D1-201ENST00000246672 SND1-IT1Q9HBX3 110 aa8.88□□□□□ -0.99
NR1D1-201ENST00000246672 LECT2O14960 151 aa8.88□□□□□ -0.99
NR1D1-201ENST00000246672 SLPIP03973 132 aa8.88□□□□□ -0.99
NR1D1-201ENST00000246672 UTP20O75691 2785 aaKnown RBP8.87□□□□□ -0.99
NR1D1-201ENST00000246672 C11orf72Q8NBR9 251 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms