RNA–Protein interactions for RNA: ENST00000234179.6

PRKD3-201, Transcript of protein kinase D3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKD3, Length 5,900 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-201ENST00000234179 NAA50Q9GZZ1 169 aaKnown RBP1.44□□□□□ -2.18
PRKD3-201ENST00000234179 SPANXB1Q9NS25 103 aaPredicted RBP1.44□□□□□ -2.18
PRKD3-201ENST00000234179 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP1.44□□□□□ -2.18
PRKD3-201ENST00000234179 IGLV4-69A0A075B6H9 119 aa1.44□□□□□ -2.18
PRKD3-201ENST00000234179 A0A087WWL8 130 aa1.44□□□□□ -2.18
PRKD3-201ENST00000234179 IGHV3-73A0A0B4J1V6 119 aa1.44□□□□□ -2.18
PRKD3-201ENST00000234179 SNRPCP09234 159 aaKnown RBP1.44□□□□□ -2.18
PRKD3-201ENST00000234179 FUSP35637 526 aaKnown RBP eCLIP1.44□□□□□ -2.18
PRKD3-201ENST00000234179 Q1RN00 199 aa1.44□□□□□ -2.18
PRKD3-201ENST00000234179 LINC00269Q8N2A0 174 aa1.44□□□□□ -2.18
PRKD3-201ENST00000234179 IMMP2LQ96T52 175 aa1.44□□□□□ -2.18
PRKD3-201ENST00000234179 M0R381 172 aa1.44□□□□□ -2.18
PRKD3-201ENST00000234179 NUPR1O60356 82 aa1.44□□□□□ -2.18
PRKD3-201ENST00000234179 JOSD1Q15040 202 aaPredicted RBP1.44□□□□□ -2.18
PRKD3-201ENST00000234179 AKR1C8PQ5T2L2 129 aa1.44□□□□□ -2.18
PRKD3-201ENST00000234179 KRTAP26-1Q6PEX3 210 aa1.44□□□□□ -2.18
PRKD3-201ENST00000234179 AKAP14Q86UN6 197 aa1.44□□□□□ -2.18
PRKD3-201ENST00000234179 LINC00526Q96FQ7 95 aa1.44□□□□□ -2.18
PRKD3-201ENST00000234179 NIT2Q9NQR4 276 aa1.44□□□□□ -2.18
PRKD3-201ENST00000234179 IGKV3D-20A0A0C4DH25 116 aa1.43□□□□□ -2.18
PRKD3-201ENST00000234179 A0A1B0GVG6 124 aa1.43□□□□□ -2.18
PRKD3-201ENST00000234179 SH2D1AO60880 128 aa1.43□□□□□ -2.18
PRKD3-201ENST00000234179 ARL14EPLP0DKL9 152 aa1.43□□□□□ -2.18
PRKD3-201ENST00000234179 GAGE6Q13070 117 aa1.43□□□□□ -2.18
PRKD3-201ENST00000234179 ALG5Q9Y673 324 aa1.43□□□□□ -2.18
PRKD3-201ENST00000234179 GAGE12HA6NDE8 117 aa1.43□□□□□ -2.18
PRKD3-201ENST00000234179 UMAD1C9J7I0 102 aa1.43□□□□□ -2.18
PRKD3-201ENST00000234179 EIF3GO75821 320 aaKnown RBP eCLIP1.43□□□□□ -2.18
PRKD3-201ENST00000234179 APCSP02743 223 aa1.43□□□□□ -2.18
PRKD3-201ENST00000234179 SCGB1C2P0DMR2 95 aa1.43□□□□□ -2.18
PRKD3-201ENST00000234179 HNRNPA3P51991 378 aaKnown RBP1.43□□□□□ -2.18
PRKD3-201ENST00000234179 ANKRD39Q53RE8 183 aa1.43□□□□□ -2.18
PRKD3-201ENST00000234179 GCSAMLQ5JQS6 135 aa1.43□□□□□ -2.18
PRKD3-201ENST00000234179 OR5A1Q8NGJ0 315 aa1.43□□□□□ -2.18
PRKD3-201ENST00000234179 TPPP3Q9BW30 176 aa1.43□□□□□ -2.18
PRKD3-201ENST00000234179 FAT1Q14517 4588 aa1.43□□□□□ -2.18
PRKD3-201ENST00000234179 MPC2O95563 127 aa1.43□□□□□ -2.18
PRKD3-201ENST00000234179 ESDP10768 282 aa1.43□□□□□ -2.18
PRKD3-201ENST00000234179 FABP2P12104 132 aa1.43□□□□□ -2.18
PRKD3-201ENST00000234179 TMEM241Q24JQ0 296 aa1.43□□□□□ -2.18
PRKD3-201ENST00000234179 LBHQ53QV2 105 aaPredicted RBP1.43□□□□□ -2.18
PRKD3-201ENST00000234179 ANKRD29Q8N6D5 301 aa1.43□□□□□ -2.18
PRKD3-201ENST00000234179 TVP23CQ96ET8 276 aa1.43□□□□□ -2.18
PRKD3-201ENST00000234179 SPANXCQ9NY87 97 aa1.43□□□□□ -2.18
PRKD3-201ENST00000234179 LTAP01374 205 aa1.43□□□□□ -2.18
PRKD3-201ENST00000234179 PRB4P10163 310 aaPredicted RBP1.43□□□□□ -2.18
PRKD3-201ENST00000234179 HINT1P49773 126 aaPredicted RBP1.43□□□□□ -2.18
PRKD3-201ENST00000234179 RPL24P83731 157 aaKnown RBP1.43□□□□□ -2.18
PRKD3-201ENST00000234179 NHLH2Q02577 135 aa1.43□□□□□ -2.18
PRKD3-201ENST00000234179 LINC01620Q4KN68 170 aa1.43□□□□□ -2.18
PRKD3-201ENST00000234179 PDZD11Q5EBL8 140 aa1.43□□□□□ -2.18
PRKD3-201ENST00000234179 CD164L2Q6UWJ8 174 aa1.43□□□□□ -2.18
PRKD3-201ENST00000234179 MRPL55Q7Z7F7 128 aaKnown RBP1.43□□□□□ -2.18
PRKD3-201ENST00000234179 OR10D4PQ8NGN7 298 aa1.43□□□□□ -2.18
PRKD3-201ENST00000234179 CYTL1Q9NRR1 136 aa1.43□□□□□ -2.18
PRKD3-201ENST00000234179 C19orf71A6NCJ1 209 aa1.42□□□□□ -2.18
PRKD3-201ENST00000234179 C1orf196B1AJZ1 125 aa1.42□□□□□ -2.18
PRKD3-201ENST00000234179 G3V3Q6 166 aa1.42□□□□□ -2.18
PRKD3-201ENST00000234179 H0Y9J4 135 aa1.42□□□□□ -2.18
PRKD3-201ENST00000234179 NDUFC2O95298 119 aa1.42□□□□□ -2.18
PRKD3-201ENST00000234179 ATP6V0CP27449 155 aa1.42□□□□□ -2.18
PRKD3-201ENST00000234179 ZNF80P51504 273 aaPredicted RBP1.42□□□□□ -2.18
PRKD3-201ENST00000234179 COX6A2Q02221 97 aa1.42□□□□□ -2.18
PRKD3-201ENST00000234179 C20orf203Q8NBC4 194 aa1.42□□□□□ -2.18
PRKD3-201ENST00000234179 MAP1LC3BQ9GZQ8 125 aa1.42□□□□□ -2.18
PRKD3-201ENST00000234179 SMCO4Q9NRQ5 59 aa1.42□□□□□ -2.18
PRKD3-201ENST00000234179 GNG5P63218 68 aa1.42□□□□□ -2.18
PRKD3-201ENST00000234179 MRPL52Q86TS9 123 aaKnown RBP1.42□□□□□ -2.18
PRKD3-201ENST00000234179 LINC01561Q8N1V8 128 aa1.42□□□□□ -2.18
PRKD3-201ENST00000234179 OR2D3Q8NGH3 330 aa1.42□□□□□ -2.18
PRKD3-201ENST00000234179 OR13C6PQ8NH95 151 aa1.42□□□□□ -2.18
PRKD3-201ENST00000234179 PRSS3P2Q8NHM4 247 aa1.42□□□□□ -2.18
PRKD3-201ENST00000234179 PPP1R1CQ8WVI7 109 aa1.42□□□□□ -2.18
PRKD3-201ENST00000234179 CHCHD10Q8WYQ3 142 aaPredicted RBP1.42□□□□□ -2.18
PRKD3-201ENST00000234179 TIMM21Q9BVV7 248 aa1.42□□□□□ -2.18
PRKD3-201ENST00000234179 VCX2Q9H322 139 aa1.42□□□□□ -2.18
PRKD3-201ENST00000234179 K7ERS5 55 aa1.42□□□□□ -2.18
PRKD3-201ENST00000234179 CAMPP49913 170 aa1.42□□□□□ -2.18
PRKD3-201ENST00000234179 BAGE2Q86Y30 109 aa1.42□□□□□ -2.18
PRKD3-201ENST00000234179 LINC00469Q8N7U9 141 aa1.42□□□□□ -2.18
PRKD3-201ENST00000234179 MAP1LC3AQ9H492 121 aa1.42□□□□□ -2.18
PRKD3-201ENST00000234179 SPANXA1Q9NS26 97 aa1.42□□□□□ -2.18
PRKD3-201ENST00000234179 IGLV7-43P04211 117 aa1.42□□□□□ -2.18
PRKD3-201ENST00000234179 TLX1NBP0CAT3 122 aa1.42□□□□□ -2.18
PRKD3-201ENST00000234179 NTF3P20783 257 aa1.42□□□□□ -2.18
PRKD3-201ENST00000234179 FAM229BQ4G0N7 80 aa1.42□□□□□ -2.18
PRKD3-201ENST00000234179 SCGB1D4Q6XE38 83 aa1.42□□□□□ -2.18
PRKD3-201ENST00000234179 MANBALQ9NQG1 85 aa1.42□□□□□ -2.18
PRKD3-201ENST00000234179 CSDC2Q9Y534 153 aaKnown RBP1.42□□□□□ -2.18
PRKD3-201ENST00000234179 IGKV2-24A0A0C4DH68 120 aa1.42□□□□□ -2.18
PRKD3-201ENST00000234179 TRBV6-5A0A0K0K1A5 114 aa1.42□□□□□ -2.18
PRKD3-201ENST00000234179 A0A1B0GV50 99 aa1.42□□□□□ -2.18
PRKD3-201ENST00000234179 KANTRA0A1W2PQU2 76 aa1.42□□□□□ -2.18
PRKD3-201ENST00000234179 MAP1LC3B2A6NCE7 125 aa1.42□□□□□ -2.18
PRKD3-201ENST00000234179 M0QY20 66 aa1.42□□□□□ -2.18
PRKD3-201ENST00000234179 TNFRSF6BO95407 300 aa1.42□□□□□ -2.18
PRKD3-201ENST00000234179 CHTF8P0CG12 524 aa1.42□□□□□ -2.18
PRKD3-201ENST00000234179 MALP21145 153 aa1.42□□□□□ -2.18
PRKD3-201ENST00000234179 COL5A1-AS1Q5SY13 56 aa1.42□□□□□ -2.18
PRKD3-201ENST00000234179 SPAG11AQ6PDA7 123 aa1.42□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 184.4 ms