RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 M0QY20 66 aa13.64□□□□□ -0.23
CLIP2-201ENST00000223398 RETNQ9HD89 108 aa13.64□□□□□ -0.23
CLIP2-201ENST00000223398 IGKV3D-7A0A0C4DH55 119 aa13.64□□□□□ -0.23
CLIP2-201ENST00000223398 CHD8Q9HCK8 2581 aa13.63□□□□□ -0.23
CLIP2-201ENST00000223398 PRR9Q5T870 116 aa13.63□□□□□ -0.23
CLIP2-201ENST00000223398 LINC01620Q4KN68 170 aa13.63□□□□□ -0.23
CLIP2-201ENST00000223398 KIR2DL5BA0A0G2JN68 375 aa13.63□□□□□ -0.23
CLIP2-201ENST00000223398 KIR2DL5BA0A0G2JPC4 375 aa13.63□□□□□ -0.23
CLIP2-201ENST00000223398 KIR2DL5AQ8N109 375 aa13.63□□□□□ -0.23
CLIP2-201ENST00000223398 H0Y9J4 135 aa13.62□□□□□ -0.23
CLIP2-201ENST00000223398 LRP4O75096 1905 aa13.62□□□□□ -0.23
CLIP2-201ENST00000223398 IGLV4-3A0A075B6K6 122 aa13.61□□□□□ -0.23
CLIP2-201ENST00000223398 IGKV2D-26A0A0A0MRZ7 120 aa13.6□□□□□ -0.23
CLIP2-201ENST00000223398 NDUFA7O95182 113 aa13.6□□□□□ -0.23
CLIP2-201ENST00000223398 ANKRD11Q6UB99 2663 aaPredicted RBP13.6□□□□□ -0.23
CLIP2-201ENST00000223398 A0A0J9YXY3 114 aa13.6□□□□□ -0.23
CLIP2-201ENST00000223398 TLN2Q9Y4G6 2542 aa13.59□□□□□ -0.23
CLIP2-201ENST00000223398 RBX1P62877 108 aa13.59□□□□□ -0.23
CLIP2-201ENST00000223398 ABCA12Q86UK0 2595 aa13.59□□□□□ -0.23
CLIP2-201ENST00000223398 SYCNQ0VAF6 134 aa13.59□□□□□ -0.23
CLIP2-201ENST00000223398 MIAQ16674 131 aa13.59□□□□□ -0.23
CLIP2-201ENST00000223398 KIR2DL5BQ8NHK3 375 aa13.58□□□□□ -0.23
CLIP2-201ENST00000223398 DCANP1Q8TF63 244 aa13.58□□□□□ -0.23
CLIP2-201ENST00000223398 RBM3P98179 157 aaKnown RBP13.58□□□□□ -0.24
CLIP2-201ENST00000223398 H7C423 109 aa13.58□□□□□ -0.24
CLIP2-201ENST00000223398 HIGD1BQ9P298 99 aa13.57□□□□□ -0.24
CLIP2-201ENST00000223398 RNASE3P12724 160 aaKnown RBP13.57□□□□□ -0.24
CLIP2-201ENST00000223398 C11orf21Q9P2W6 132 aa13.57□□□□□ -0.24
CLIP2-201ENST00000223398 BRI3O95415 125 aa13.56□□□□□ -0.24
CLIP2-201ENST00000223398 IGLV2-11P01706 119 aa13.56□□□□□ -0.24
CLIP2-201ENST00000223398 CENPFP49454 3210 aa13.56□□□□□ -0.24
CLIP2-201ENST00000223398 SPANXCQ9NY87 97 aa13.55□□□□□ -0.24
CLIP2-201ENST00000223398 ZNF22P17026 224 aaPredicted RBP13.55□□□□□ -0.24
CLIP2-201ENST00000223398 PIK3CD-AS1Q5SR53 167 aa13.55□□□□□ -0.24
CLIP2-201ENST00000223398 SPTBN4Q9H254 2564 aa13.54□□□□□ -0.24
CLIP2-201ENST00000223398 C7orf33Q8WU49 177 aa13.54□□□□□ -0.24
CLIP2-201ENST00000223398 ODF3L2Q3SX64 289 aa13.54□□□□□ -0.24
CLIP2-201ENST00000223398 RNF185Q96GF1 192 aa13.54□□□□□ -0.24
CLIP2-201ENST00000223398 A8MZ25 164 aa13.54□□□□□ -0.24
CLIP2-201ENST00000223398 GOLGB1Q14789 3259 aaKnown RBP13.54□□□□□ -0.24
CLIP2-201ENST00000223398 A0A1B0GX51 115 aa13.53□□□□□ -0.24
CLIP2-201ENST00000223398 IGKV2-28A0A075B6P5 120 aa13.53□□□□□ -0.24
CLIP2-201ENST00000223398 IGKV2D-28P01615 120 aa13.53□□□□□ -0.24
CLIP2-201ENST00000223398 JMJD7-PLA2G4BH0Y9G9 81 aa13.53□□□□□ -0.24
CLIP2-201ENST00000223398 CHKB-CPT1BH3BT56 60 aa13.53□□□□□ -0.24
CLIP2-201ENST00000223398 ZNF462Q96JM2 2506 aa13.53□□□□□ -0.24
CLIP2-201ENST00000223398 TMEM256-PLSCR3K7ERE1 68 aa13.53□□□□□ -0.24
CLIP2-201ENST00000223398 KLLNB2CW77 178 aa13.52□□□□□ -0.24
CLIP2-201ENST00000223398 H3BQ85 93 aa13.52□□□□□ -0.24
CLIP2-201ENST00000223398 WFDC2Q14508 124 aa13.52□□□□□ -0.24
CLIP2-201ENST00000223398 LELP1Q5T871 98 aa13.51□□□□□ -0.25
CLIP2-201ENST00000223398 C14orf132Q9NPU4 83 aa13.51□□□□□ -0.25
CLIP2-201ENST00000223398 FOXI1Q12951 378 aa13.51□□□□□ -0.25
CLIP2-201ENST00000223398 A0A0B4J2C4 111 aa13.51□□□□□ -0.25
CLIP2-201ENST00000223398 ACYP1P07311 99 aa13.51□□□□□ -0.25
CLIP2-201ENST00000223398 TMEM223A0PJW6 202 aa13.5□□□□□ -0.25
CLIP2-201ENST00000223398 C9orf85Q96MD7 179 aa13.5□□□□□ -0.25
CLIP2-201ENST00000223398 PPDPFQ9H3Y8 114 aa13.5□□□□□ -0.25
CLIP2-201ENST00000223398 HCFC1P51610 2035 aa13.5□□□□□ -0.25
CLIP2-201ENST00000223398 SLPIP03973 132 aa13.49□□□□□ -0.25
CLIP2-201ENST00000223398 MP68P56378 58 aa13.49□□□□□ -0.25
CLIP2-201ENST00000223398 RAI1Q7Z5J4 1906 aaPredicted RBP13.49□□□□□ -0.25
CLIP2-201ENST00000223398 TSHBP01222 138 aa13.49□□□□□ -0.25
CLIP2-201ENST00000223398 USP9XQ93008 2570 aaPredicted RBP13.48□□□□□ -0.25
CLIP2-201ENST00000223398 TRBV10-2A0A0K0K1G8 114 aa13.48□□□□□ -0.25
CLIP2-201ENST00000223398 MRGPRG-AS1Q2M3A8 158 aa13.47□□□□□ -0.25
CLIP2-201ENST00000223398 PTH2Q96A98 100 aa13.47□□□□□ -0.25
CLIP2-201ENST00000223398 IGLV1-51P01701 117 aa13.47□□□□□ -0.25
CLIP2-201ENST00000223398 TEN1Q86WV5 123 aa13.47□□□□□ -0.25
CLIP2-201ENST00000223398 CD164L2Q6UWJ8 174 aa13.47□□□□□ -0.25
CLIP2-201ENST00000223398 IBA57-AS1B1ANH7 110 aa13.46□□□□□ -0.25
CLIP2-201ENST00000223398 TP73-AS1Q9UF72 201 aa13.46□□□□□ -0.25
CLIP2-201ENST00000223398 TRBV27A0A0K0K1C4 114 aa13.46□□□□□ -0.25
CLIP2-201ENST00000223398 CITED1Q99966 193 aa13.46□□□□□ -0.25
CLIP2-201ENST00000223398 LINC00959A0A1B0GUT2 108 aa13.45□□□□□ -0.26
CLIP2-201ENST00000223398 FN1P02751 2386 aaKnown RBP13.45□□□□□ -0.26
CLIP2-201ENST00000223398 LRRK2Q5S007 2527 aa13.45□□□□□ -0.26
CLIP2-201ENST00000223398 SETD2Q9BYW2 2564 aaPredicted RBP13.45□□□□□ -0.26
CLIP2-201ENST00000223398 TAX1BP3O14907 124 aa13.45□□□□□ -0.26
CLIP2-201ENST00000223398 LINC00308Q8TCZ7 52 aa13.45□□□□□ -0.26
CLIP2-201ENST00000223398 SPANXDQ9BXN6 97 aa13.45□□□□□ -0.26
CLIP2-201ENST00000223398 WFDC9Q8NEX5 89 aa13.45□□□□□ -0.26
CLIP2-201ENST00000223398 COL5A1P20908 1838 aaPredicted RBP13.44□□□□□ -0.26
CLIP2-201ENST00000223398 GAS8-AS1O95177 125 aa13.44□□□□□ -0.26
CLIP2-201ENST00000223398 SPATA12Q7Z6I5 190 aa13.44□□□□□ -0.26
CLIP2-201ENST00000223398 RPL37AP8A6NKH3 93 aa13.44□□□□□ -0.26
CLIP2-201ENST00000223398 UBE2D1P51668 147 aa13.43□□□□□ -0.26
CLIP2-201ENST00000223398 TCL1BO95988 128 aa13.42□□□□□ -0.26
CLIP2-201ENST00000223398 Q6ZTC4 211 aa13.42□□□□□ -0.26
CLIP2-201ENST00000223398 TRBV6-5A0A0K0K1A5 114 aa13.42□□□□□ -0.26
CLIP2-201ENST00000223398 C6orf99Q4VX62 202 aa13.42□□□□□ -0.26
CLIP2-201ENST00000223398 NRACQ8N912 160 aa13.42□□□□□ -0.26
CLIP2-201ENST00000223398 HRCT1Q6UXD1 115 aa13.42□□□□□ -0.26
CLIP2-201ENST00000223398 UBE2D4Q9Y2X8 147 aa13.42□□□□□ -0.26
CLIP2-201ENST00000223398 IGKV4-1P06312 121 aa13.41□□□□□ -0.26
CLIP2-201ENST00000223398 MAPKAPK5-AS1Q8N8E1 139 aa13.41□□□□□ -0.26
CLIP2-201ENST00000223398 C16orf95Q9H693 158 aa13.41□□□□□ -0.26
CLIP2-201ENST00000223398 IGLV4-69A0A075B6H9 119 aa13.41□□□□□ -0.26
CLIP2-201ENST00000223398 C5orf47Q569G3 176 aa13.41□□□□□ -0.26
CLIP2-201ENST00000223398 NUPR2A6NF83 97 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms