RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 A6NDX4 124 aa10.02□□□□□ -0.81
GABPB1-201ENST00000220429 ADARB2-AS1A8MUL3 147 aa10.02□□□□□ -0.81
GABPB1-201ENST00000220429 MGPP08493 103 aa10.02□□□□□ -0.81
GABPB1-201ENST00000220429 SMIM26A0A096LP01 95 aa10.01□□□□□ -0.81
GABPB1-201ENST00000220429 PPP1R17O96001 155 aa10.01□□□□□ -0.81
GABPB1-201ENST00000220429 LRRK2Q5S007 2527 aa10.01□□□□□ -0.81
GABPB1-201ENST00000220429 POLQO75417 2590 aa10.01□□□□□ -0.81
GABPB1-201ENST00000220429 TRBV12-3P01733 135 aa10.01□□□□□ -0.81
GABPB1-201ENST00000220429 IGHG2P01859 326 aa10.01□□□□□ -0.81
GABPB1-201ENST00000220429 FP248Q71RG6 208 aaPredicted RBP10.01□□□□□ -0.81
GABPB1-201ENST00000220429 DEFB104AQ8WTQ1 72 aa10.01□□□□□ -0.81
GABPB1-201ENST00000220429 ZNF580Q9UK33 172 aa10.01□□□□□ -0.81
GABPB1-201ENST00000220429 MIAQ16674 131 aa10□□□□□ -0.81
GABPB1-201ENST00000220429 PRB1P04280 392 aa10□□□□□ -0.81
GABPB1-201ENST00000220429 BLCAPP62952 87 aa10□□□□□ -0.81
GABPB1-201ENST00000220429 GPHB5Q86YW7 130 aa10□□□□□ -0.81
GABPB1-201ENST00000220429 COX7A2LO14548 114 aa9.99□□□□□ -0.81
GABPB1-201ENST00000220429 C22orf24Q9Y442 160 aa9.99□□□□□ -0.81
GABPB1-201ENST00000220429 B4DSR2 109 aa9.99□□□□□ -0.81
GABPB1-201ENST00000220429 UNQ9165/PRO28630Q6UXU0 137 aa9.99□□□□□ -0.81
GABPB1-201ENST00000220429 C20orf173Q96LM9 149 aa9.99□□□□□ -0.81
GABPB1-201ENST00000220429 CIRBPQ14011 172 aaKnown RBP9.98□□□□□ -0.81
GABPB1-201ENST00000220429 IL17DQ8TAD2 202 aa9.98□□□□□ -0.81
GABPB1-201ENST00000220429 IGHV3-30-3P0DP02 117 aa9.98□□□□□ -0.81
GABPB1-201ENST00000220429 FAM222AQ5U5X8 452 aa9.98□□□□□ -0.81
GABPB1-201ENST00000220429 UBR5O95071 2799 aaPredicted RBP9.97□□□□□ -0.81
GABPB1-201ENST00000220429 KNCNA6PVL3 124 aa9.97□□□□□ -0.81
GABPB1-201ENST00000220429 DNAL4O96015 105 aa9.97□□□□□ -0.81
GABPB1-201ENST00000220429 IGHV3-11P01762 117 aa9.97□□□□□ -0.81
GABPB1-201ENST00000220429 BEAN1Q3B7T3 259 aa9.97□□□□□ -0.81
GABPB1-201ENST00000220429 MRPL53Q96EL3 112 aaKnown RBP9.97□□□□□ -0.81
GABPB1-201ENST00000220429 BBC3Q96PG8 261 aaPredicted RBP9.97□□□□□ -0.81
GABPB1-201ENST00000220429 C20orf197Q8N268 126 aa9.97□□□□□ -0.81
GABPB1-201ENST00000220429 RBMY1BA6NDE4 496 aaKnown RBP9.96□□□□□ -0.81
GABPB1-201ENST00000220429 RBMY1EA6NEQ0 496 aaKnown RBP9.96□□□□□ -0.81
GABPB1-201ENST00000220429 H3BUA1 57 aa9.96□□□□□ -0.81
GABPB1-201ENST00000220429 NDUFA4O00483 81 aa9.96□□□□□ -0.81
GABPB1-201ENST00000220429 RBMY1DP0C7P1 496 aaKnown RBP9.96□□□□□ -0.81
GABPB1-201ENST00000220429 RBMY1A1P0DJD3 496 aaKnown RBP9.96□□□□□ -0.81
GABPB1-201ENST00000220429 RBMY1CP0DJD4 496 aa9.96□□□□□ -0.81
GABPB1-201ENST00000220429 DSCR9P59020 149 aa9.96□□□□□ -0.81
GABPB1-201ENST00000220429 RBMY1FQ15415 496 aaKnown RBP9.96□□□□□ -0.81
GABPB1-201ENST00000220429 LINC00482Q8N8I6 264 aa9.96□□□□□ -0.81
GABPB1-201ENST00000220429 UBE2D4Q9Y2X8 147 aa9.96□□□□□ -0.81
GABPB1-201ENST00000220429 GHRHP01286 108 aa9.96□□□□□ -0.82
GABPB1-201ENST00000220429 USMG5Q96IX5 58 aa9.96□□□□□ -0.82
GABPB1-201ENST00000220429 OPRPNQ99935 248 aaPredicted RBP9.96□□□□□ -0.82
GABPB1-201ENST00000220429 PTPN13Q12923 2485 aa9.95□□□□□ -0.82
GABPB1-201ENST00000220429 A0A1W2PRX2 142 aa9.95□□□□□ -0.82
GABPB1-201ENST00000220429 XCL1P47992 114 aa9.95□□□□□ -0.82
GABPB1-201ENST00000220429 XCL2Q9UBD3 114 aa9.95□□□□□ -0.82
GABPB1-201ENST00000220429 A0A096LNT2 108 aa9.95□□□□□ -0.82
GABPB1-201ENST00000220429 IGLV1-40P01703 118 aa9.95□□□□□ -0.82
GABPB1-201ENST00000220429 C6orf226Q5I0X4 101 aa9.95□□□□□ -0.82
GABPB1-201ENST00000220429 C9orf47Q6ZRZ4 202 aa9.95□□□□□ -0.82
GABPB1-201ENST00000220429 A0A0J9YXV3 536 aa9.94□□□□□ -0.82
GABPB1-201ENST00000220429 VCYO14598 125 aa9.94□□□□□ -0.82
GABPB1-201ENST00000220429 NXPH4O95158 308 aa9.94□□□□□ -0.82
GABPB1-201ENST00000220429 POLR2KP53803 58 aaKnown RBP9.94□□□□□ -0.82
GABPB1-201ENST00000220429 MXRA5Q9NR99 2828 aa9.94□□□□□ -0.82
GABPB1-201ENST00000220429 LINC00846Q9NV44 126 aa9.94□□□□□ -0.82
GABPB1-201ENST00000220429 PHLDA3Q9Y5J5 127 aa9.94□□□□□ -0.82
GABPB1-201ENST00000220429 DOPEY2Q9Y3R5 2298 aa9.94□□□□□ -0.82
GABPB1-201ENST00000220429 H7BZZ5 65 aa9.93□□□□□ -0.82
GABPB1-201ENST00000220429 MRPS36P82909 103 aaKnown RBP9.93□□□□□ -0.82
GABPB1-201ENST00000220429 CFHR3Q02985 330 aa9.93□□□□□ -0.82
GABPB1-201ENST00000220429 NDUFA12Q9UI09 145 aa9.93□□□□□ -0.82
GABPB1-201ENST00000220429 LINC01356Q8N9X3 169 aa9.93□□□□□ -0.82
GABPB1-201ENST00000220429 ABCA12Q86UK0 2595 aa9.93□□□□□ -0.82
GABPB1-201ENST00000220429 S100A4P26447 101 aaKnown RBP9.92□□□□□ -0.82
GABPB1-201ENST00000220429 MAPK1IP1LQ8NDC0 245 aa9.92□□□□□ -0.82
GABPB1-201ENST00000220429 SOCS3O14543 225 aa9.92□□□□□ -0.82
GABPB1-201ENST00000220429 IGHV4-59P01825 116 aa9.92□□□□□ -0.82
GABPB1-201ENST00000220429 DEFB112Q30KQ8 113 aa9.92□□□□□ -0.82
GABPB1-201ENST00000220429 CR1P17927 2039 aa9.92□□□□□ -0.82
GABPB1-201ENST00000220429 IGHV4OR15-8A0A075B7B6 117 aa9.91□□□□□ -0.82
GABPB1-201ENST00000220429 A0A087WW49 117 aa9.91□□□□□ -0.82
GABPB1-201ENST00000220429 NBPF19A0A087WUL8 3843 aa9.91□□□□□ -0.82
GABPB1-201ENST00000220429 PRR9Q5T870 116 aa9.91□□□□□ -0.82
GABPB1-201ENST00000220429 LYPD5Q6UWN5 251 aa9.91□□□□□ -0.82
GABPB1-201ENST00000220429 Q8N2B8 174 aa9.91□□□□□ -0.82
GABPB1-201ENST00000220429 ZNF469Q96JG9 3925 aaPredicted RBP9.91□□□□□ -0.82
GABPB1-201ENST00000220429 DEFB1P60022 68 aa9.91□□□□□ -0.82
GABPB1-201ENST00000220429 EPG5Q9HCE0 2579 aa9.9□□□□□ -0.82
GABPB1-201ENST00000220429 LINC00474Q9P2X8 69 aa9.9□□□□□ -0.82
GABPB1-201ENST00000220429 FAM19A1Q7Z5A9 133 aa9.9□□□□□ -0.83
GABPB1-201ENST00000220429 ZNF843Q8N446 348 aa9.9□□□□□ -0.83
GABPB1-201ENST00000220429 HILS1P60008 231 aa9.89□□□□□ -0.83
GABPB1-201ENST00000220429 COPS9Q8WXC6 57 aa9.89□□□□□ -0.83
GABPB1-201ENST00000220429 VSIG2Q96IQ7 327 aa9.89□□□□□ -0.83
GABPB1-201ENST00000220429 TEX15Q9BXT5 2789 aa9.89□□□□□ -0.83
GABPB1-201ENST00000220429 RPL28P46779 137 aaKnown RBP9.89□□□□□ -0.83
GABPB1-201ENST00000220429 RHPN1-AS1Q9BWJ2 59 aa9.89□□□□□ -0.83
GABPB1-201ENST00000220429 C14orf132Q9NPU4 83 aa9.89□□□□□ -0.83
GABPB1-201ENST00000220429 NAV2Q8IVL1 2488 aa9.88□□□□□ -0.83
GABPB1-201ENST00000220429 TRAV23DV6A0A075B6W5 121 aa9.88□□□□□ -0.83
GABPB1-201ENST00000220429 IGHV1-58A0A0C4DH39 117 aa9.88□□□□□ -0.83
GABPB1-201ENST00000220429 A0A0U1RRA0 63 aa9.88□□□□□ -0.83
GABPB1-201ENST00000220429 RPL11P62913 178 aaKnown RBP9.88□□□□□ -0.83
GABPB1-201ENST00000220429 C10orf99Q6UWK7 81 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms