RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 UBE2D1P51668 147 aa14.03□□□□□ -0.16
SMPD3-201ENST00000219334 WFDC2Q14508 124 aa14.03□□□□□ -0.16
SMPD3-201ENST00000219334 LELP1Q5T871 98 aa14.03□□□□□ -0.16
SMPD3-201ENST00000219334 PROK1P58294 105 aa14.02□□□□□ -0.16
SMPD3-201ENST00000219334 ZNF22P17026 224 aaPredicted RBP14.02□□□□□ -0.17
SMPD3-201ENST00000219334 SMR3AQ99954 134 aa14.02□□□□□ -0.17
SMPD3-201ENST00000219334 FAM236AA0A1B0GUQ0 79 aa14.01□□□□□ -0.17
SMPD3-201ENST00000219334 FAM236BA0A1B0GV22 79 aa14.01□□□□□ -0.17
SMPD3-201ENST00000219334 CDSNQ15517 529 aa14.01□□□□□ -0.17
SMPD3-201ENST00000219334 MBD6Q96DN6 1003 aa14.01□□□□□ -0.17
SMPD3-201ENST00000219334 C2CD3Q4AC94 2353 aa14.01□□□□□ -0.17
SMPD3-201ENST00000219334 Q6ZS46 218 aa14.01□□□□□ -0.17
SMPD3-201ENST00000219334 SPANXB1Q9NS25 103 aaPredicted RBP14.01□□□□□ -0.17
SMPD3-201ENST00000219334 TNRC6BQ9UPQ9 1833 aaKnown RBP14□□□□□ -0.17
SMPD3-201ENST00000219334 CD164L2Q6UWJ8 174 aa14□□□□□ -0.17
SMPD3-201ENST00000219334 UPK3BQ9BT76 320 aa14□□□□□ -0.17
SMPD3-201ENST00000219334 PIEZO2Q9H5I5 2752 aa13.99□□□□□ -0.17
SMPD3-201ENST00000219334 OBSL1O75147 1896 aa13.99□□□□□ -0.17
SMPD3-201ENST00000219334 ZNF295-AS1Q8N0V1 137 aa13.99□□□□□ -0.17
SMPD3-201ENST00000219334 C9orf85Q96MD7 179 aa13.99□□□□□ -0.17
SMPD3-201ENST00000219334 COL4A4P53420 1690 aaPredicted RBP13.99□□□□□ -0.17
SMPD3-201ENST00000219334 IGHV4-30-4P0DP06 118 aa13.99□□□□□ -0.17
SMPD3-201ENST00000219334 CASC2Q6XLA1 102 aa13.99□□□□□ -0.17
SMPD3-201ENST00000219334 MYO9AB2RTY4 2548 aa13.99□□□□□ -0.17
SMPD3-201ENST00000219334 KRTAP10-9P60411 292 aa13.99□□□□□ -0.17
SMPD3-201ENST00000219334 TMEM223A0PJW6 202 aa13.98□□□□□ -0.17
SMPD3-201ENST00000219334 A0A0J9YWU9 116 aa13.98□□□□□ -0.17
SMPD3-201ENST00000219334 CLUHP3Q96NS8 147 aa13.98□□□□□ -0.17
SMPD3-201ENST00000219334 ALPK3Q96L96 1907 aa13.98□□□□□ -0.17
SMPD3-201ENST00000219334 NANOS2P60321 138 aaKnown RBP13.97□□□□□ -0.17
SMPD3-201ENST00000219334 FOXI1Q12951 378 aa13.97□□□□□ -0.17
SMPD3-201ENST00000219334 ZNF706Q9Y5V0 76 aaPredicted RBP13.97□□□□□ -0.17
SMPD3-201ENST00000219334 AVPP01185 164 aa13.97□□□□□ -0.17
SMPD3-201ENST00000219334 IGLV4-69A0A075B6H9 119 aa13.97□□□□□ -0.17
SMPD3-201ENST00000219334 CRIP1P50238 77 aa13.97□□□□□ -0.17
SMPD3-201ENST00000219334 LINC00308Q8TCZ7 52 aa13.96□□□□□ -0.17
SMPD3-201ENST00000219334 TRBV6-5A0A0K0K1A5 114 aa13.95□□□□□ -0.18
SMPD3-201ENST00000219334 TRBV27A0A0K0K1C4 114 aa13.95□□□□□ -0.18
SMPD3-201ENST00000219334 ZNF106Q9H2Y7 1883 aaKnown RBP13.95□□□□□ -0.18
SMPD3-201ENST00000219334 TAX1BP3O14907 124 aa13.95□□□□□ -0.18
SMPD3-201ENST00000219334 PYGO1Q9Y3Y4 419 aa13.95□□□□□ -0.18
SMPD3-201ENST00000219334 PIK3CD-AS1Q5SR53 167 aa13.95□□□□□ -0.18
SMPD3-201ENST00000219334 B5MCH6 92 aa13.94□□□□□ -0.18
SMPD3-201ENST00000219334 MRGPRG-AS1Q2M3A8 158 aa13.94□□□□□ -0.18
SMPD3-201ENST00000219334 ARHGAP21Q5T5U3 1957 aa13.94□□□□□ -0.18
SMPD3-201ENST00000219334 LOC107984640A0A0U1RRK4 108 aa13.94□□□□□ -0.18
SMPD3-201ENST00000219334 JMJD1CQ15652 2540 aa13.94□□□□□ -0.18
SMPD3-201ENST00000219334 KLLNB2CW77 178 aa13.94□□□□□ -0.18
SMPD3-201ENST00000219334 IGKV2-28A0A075B6P5 120 aa13.93□□□□□ -0.18
SMPD3-201ENST00000219334 LOC100131303A0A0U1RQF7 123 aa13.93□□□□□ -0.18
SMPD3-201ENST00000219334 IGKV2D-28P01615 120 aa13.93□□□□□ -0.18
SMPD3-201ENST00000219334 NUPR2A6NF83 97 aa13.93□□□□□ -0.18
SMPD3-201ENST00000219334 C6orf99Q4VX62 202 aa13.92□□□□□ -0.18
SMPD3-201ENST00000219334 UBE2D4Q9Y2X8 147 aa13.92□□□□□ -0.18
SMPD3-201ENST00000219334 TRAV23DV6A0A075B6W5 121 aa13.92□□□□□ -0.18
SMPD3-201ENST00000219334 RNASE3P12724 160 aaKnown RBP13.92□□□□□ -0.18
SMPD3-201ENST00000219334 TCL1BO95988 128 aa13.92□□□□□ -0.18
SMPD3-201ENST00000219334 DCANP1Q8TF63 244 aa13.92□□□□□ -0.18
SMPD3-201ENST00000219334 LINC00526Q96FQ7 95 aa13.91□□□□□ -0.18
SMPD3-201ENST00000219334 LINC00474Q9P2X8 69 aa13.91□□□□□ -0.18
SMPD3-201ENST00000219334 PPDPFQ9H3Y8 114 aa13.91□□□□□ -0.18
SMPD3-201ENST00000219334 LINC00959A0A1B0GUT2 108 aa13.91□□□□□ -0.18
SMPD3-201ENST00000219334 LINC00643Q86TS7 51 aa13.91□□□□□ -0.18
SMPD3-201ENST00000219334 RNF185Q96GF1 192 aa13.91□□□□□ -0.18
SMPD3-201ENST00000219334 USP17L23D6RBM5 183 aa13.9□□□□□ -0.18
SMPD3-201ENST00000219334 M0R378 163 aa13.9□□□□□ -0.18
SMPD3-201ENST00000219334 PTH2Q96A98 100 aa13.9□□□□□ -0.18
SMPD3-201ENST00000219334 SS18L2Q9UHA2 77 aa13.89□□□□□ -0.19
SMPD3-201ENST00000219334 SLPIP03973 132 aa13.89□□□□□ -0.19
SMPD3-201ENST00000219334 PLXNB1O43157 2135 aa13.89□□□□□ -0.19
SMPD3-201ENST00000219334 TSHBP01222 138 aa13.88□□□□□ -0.19
SMPD3-201ENST00000219334 DHRS4-AS1Q9P1J3 65 aa13.88□□□□□ -0.19
SMPD3-201ENST00000219334 SPINK6Q6UWN8 80 aa13.88□□□□□ -0.19
SMPD3-201ENST00000219334 C1orf158Q8N1D5 194 aa13.88□□□□□ -0.19
SMPD3-201ENST00000219334 PRR9Q5T870 116 aa13.87□□□□□ -0.19
SMPD3-201ENST00000219334 IGLV2-11P01706 119 aa13.87□□□□□ -0.19
SMPD3-201ENST00000219334 PRM2P04554 102 aa13.87□□□□□ -0.19
SMPD3-201ENST00000219334 U3KQK5 164 aa13.86□□□□□ -0.19
SMPD3-201ENST00000219334 UBE2D3P61077 147 aa13.86□□□□□ -0.19
SMPD3-201ENST00000219334 CCKP06307 115 aa13.86□□□□□ -0.19
SMPD3-201ENST00000219334 TLN1Q9Y490 2541 aaKnown RBP13.85□□□□□ -0.19
SMPD3-201ENST00000219334 ODF3L2Q3SX64 289 aa13.85□□□□□ -0.19
SMPD3-201ENST00000219334 ZFYVE26Q68DK2 2539 aa13.84□□□□□ -0.19
SMPD3-201ENST00000219334 KIAA1549LQ6ZVL6 1849 aa13.84□□□□□ -0.19
SMPD3-201ENST00000219334 MRPS36P82909 103 aaKnown RBP13.84□□□□□ -0.19
SMPD3-201ENST00000219334 C11orf21Q9P2W6 132 aa13.84□□□□□ -0.19
SMPD3-201ENST00000219334 PCNX3Q9H6A9 2034 aa13.84□□□□□ -0.19
SMPD3-201ENST00000219334 IGLV1-51P01701 117 aa13.84□□□□□ -0.19
SMPD3-201ENST00000219334 PLAC8L1A1L4L8 177 aa13.83□□□□□ -0.2
SMPD3-201ENST00000219334 UBE2D2P62837 147 aa13.83□□□□□ -0.2
SMPD3-201ENST00000219334 SCXQ7RTU7 201 aa13.82□□□□□ -0.2
SMPD3-201ENST00000219334 RETNQ9HD89 108 aa13.82□□□□□ -0.2
SMPD3-201ENST00000219334 C10orf142B7Z368 130 aa13.82□□□□□ -0.2
SMPD3-201ENST00000219334 WFDC10BQ8IUB3 73 aa13.81□□□□□ -0.2
SMPD3-201ENST00000219334 RPL37AP8A6NKH3 93 aa13.81□□□□□ -0.2
SMPD3-201ENST00000219334 A8MZ25 164 aa13.81□□□□□ -0.2
SMPD3-201ENST00000219334 TIMM17BO60830 172 aa13.81□□□□□ -0.2
SMPD3-201ENST00000219334 Q6ZQY7 126 aa13.8□□□□□ -0.2
SMPD3-201ENST00000219334 NRACQ8N912 160 aa13.8□□□□□ -0.2
SMPD3-201ENST00000219334 CEP192Q8TEP8 1941 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms