RNA–Protein interactions for RNA: ENST00000006275.8

TRAPPC6A-201, Transcript of trafficking protein particle complex 6A, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC6A, Length 805 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6A-201ENST00000006275 ESDP10768 282 aa12.37□□□□□ -0.43
TRAPPC6A-201ENST00000006275 SEC11CQ9BY50 192 aa12.37□□□□□ -0.43
TRAPPC6A-201ENST00000006275 D6R8Y8 96 aa12.36□□□□□ -0.43
TRAPPC6A-201ENST00000006275 FCER1GP30273 86 aa12.36□□□□□ -0.43
TRAPPC6A-201ENST00000006275 KIR2DL4Q99706 377 aa12.36□□□□□ -0.43
TRAPPC6A-201ENST00000006275 DNAH8Q96JB1 4490 aa12.36□□□□□ -0.43
TRAPPC6A-201ENST00000006275 TRBV24-1A0A075B6N3 115 aa12.35□□□□□ -0.43
TRAPPC6A-201ENST00000006275 IGKV3OR2-268A0A0C4DH90 116 aa12.35□□□□□ -0.43
TRAPPC6A-201ENST00000006275 C7orf77A4D0Y5 90 aa12.35□□□□□ -0.43
TRAPPC6A-201ENST00000006275 TNFRSF6BO95407 300 aa12.35□□□□□ -0.43
TRAPPC6A-201ENST00000006275 ZNF25P17030 456 aaPredicted RBP12.35□□□□□ -0.43
TRAPPC6A-201ENST00000006275 C14orf177Q52M58 125 aa12.35□□□□□ -0.43
TRAPPC6A-201ENST00000006275 SCXQ7RTU7 201 aa12.35□□□□□ -0.43
TRAPPC6A-201ENST00000006275 BTF3L4Q96K17 158 aa12.35□□□□□ -0.43
TRAPPC6A-201ENST00000006275 C20orf78Q9BR46 151 aa12.35□□□□□ -0.43
TRAPPC6A-201ENST00000006275 PPBPP02775 128 aa12.34□□□□□ -0.43
TRAPPC6A-201ENST00000006275 KRTAP26-1Q6PEX3 210 aa12.34□□□□□ -0.43
TRAPPC6A-201ENST00000006275 TMEM101Q96IK0 257 aa12.34□□□□□ -0.43
TRAPPC6A-201ENST00000006275 USP17L23D6RBM5 183 aa12.33□□□□□ -0.44
TRAPPC6A-201ENST00000006275 KRTAP10-4P60372 401 aaPredicted RBP12.33□□□□□ -0.44
TRAPPC6A-201ENST00000006275 CTDSP1Q9GZU7 261 aa12.33□□□□□ -0.44
TRAPPC6A-201ENST00000006275 PHOX2AO14813 284 aa12.32□□□□□ -0.44
TRAPPC6A-201ENST00000006275 NPYP01303 97 aa12.32□□□□□ -0.44
TRAPPC6A-201ENST00000006275 RPL32P62910 135 aaKnown RBP12.32□□□□□ -0.44
TRAPPC6A-201ENST00000006275 TMEM136Q6ZRR5 245 aa12.32□□□□□ -0.44
TRAPPC6A-201ENST00000006275 ORMDL3Q8N138 153 aa12.32□□□□□ -0.44
TRAPPC6A-201ENST00000006275 IMMP2LQ96T52 175 aa12.32□□□□□ -0.44
TRAPPC6A-201ENST00000006275 LINC01620Q4KN68 170 aa12.31□□□□□ -0.44
TRAPPC6A-201ENST00000006275 OR5A1Q8NGJ0 315 aa12.31□□□□□ -0.44
TRAPPC6A-201ENST00000006275 SMIM2Q9BVW6 85 aa12.31□□□□□ -0.44
TRAPPC6A-201ENST00000006275 TCAPO15273 167 aa12.3□□□□□ -0.44
TRAPPC6A-201ENST00000006275 MRPL52Q86TS9 123 aaKnown RBP12.3□□□□□ -0.44
TRAPPC6A-201ENST00000006275 PRELID3AQ96N28 172 aa12.3□□□□□ -0.44
TRAPPC6A-201ENST00000006275 SMAGPQ0VAQ4 97 aa12.29□□□□□ -0.44
TRAPPC6A-201ENST00000006275 DGAT2L7PQ6IED9 249 aa12.29□□□□□ -0.44
TRAPPC6A-201ENST00000006275 TMEM18Q96B42 140 aa12.29□□□□□ -0.44
TRAPPC6A-201ENST00000006275 CHAC1Q9BUX1 264 aa12.29□□□□□ -0.44
TRAPPC6A-201ENST00000006275 GAGE12HA6NDE8 117 aa12.27□□□□□ -0.45
TRAPPC6A-201ENST00000006275 PRSS1P07477 247 aa12.27□□□□□ -0.45
TRAPPC6A-201ENST00000006275 C10orf91Q5T1B1 145 aa12.27□□□□□ -0.45
TRAPPC6A-201ENST00000006275 CHCHD10Q8WYQ3 142 aaPredicted RBP12.27□□□□□ -0.45
TRAPPC6A-201ENST00000006275 CDC42SE2Q9NRR3 84 aa12.27□□□□□ -0.45
TRAPPC6A-201ENST00000006275 CARHSP1Q9Y2V2 147 aaKnown RBP12.27□□□□□ -0.45
TRAPPC6A-201ENST00000006275 FAT3Q8TDW7 4589 aa12.26□□□□□ -0.45
TRAPPC6A-201ENST00000006275 TRAV9-1A0A075B6T8 112 aa12.26□□□□□ -0.45
TRAPPC6A-201ENST00000006275 S100PP25815 95 aa12.26□□□□□ -0.45
TRAPPC6A-201ENST00000006275 ZNF664Q8N3J9 261 aa12.26□□□□□ -0.45
TRAPPC6A-201ENST00000006275 CLRN3Q8NCR9 226 aa12.26□□□□□ -0.45
TRAPPC6A-201ENST00000006275 CIRBP-AS1Q8TBR5 109 aa12.26□□□□□ -0.45
TRAPPC6A-201ENST00000006275 LAMTOR2Q9Y2Q5 125 aa12.26□□□□□ -0.45
TRAPPC6A-201ENST00000006275 UBE2D4Q9Y2X8 147 aa12.26□□□□□ -0.45
TRAPPC6A-201ENST00000006275 LINC00959A0A1B0GUT2 108 aa12.25□□□□□ -0.45
TRAPPC6A-201ENST00000006275 RAB5AP20339 215 aa12.24□□□□□ -0.45
TRAPPC6A-201ENST00000006275 MAP1LC3AQ9H492 121 aa12.24□□□□□ -0.45
TRAPPC6A-201ENST00000006275 RPS10P5Q9NQ39 176 aa12.24□□□□□ -0.45
TRAPPC6A-201ENST00000006275 CSDC2Q9Y534 153 aaKnown RBP12.24□□□□□ -0.45
TRAPPC6A-201ENST00000006275 LOC389332A0A1B0GUA5 103 aa12.23□□□□□ -0.45
TRAPPC6A-201ENST00000006275 RHEBQ15382 184 aa12.23□□□□□ -0.45
TRAPPC6A-201ENST00000006275 SS18Q15532 418 aa12.23□□□□□ -0.45
TRAPPC6A-201ENST00000006275 TIMM21Q9BVV7 248 aa12.23□□□□□ -0.45
TRAPPC6A-201ENST00000006275 hDV102S1A0JD36 115 aa12.22□□□□□ -0.45
TRAPPC6A-201ENST00000006275 PRSS47A8MTI9 375 aa12.22□□□□□ -0.45
TRAPPC6A-201ENST00000006275 RPL39P62891 51 aaKnown RBP12.22□□□□□ -0.45
TRAPPC6A-201ENST00000006275 CFAP161Q6P656 301 aa12.22□□□□□ -0.45
TRAPPC6A-201ENST00000006275 CCL25O15444 150 aa12.21□□□□□ -0.45
TRAPPC6A-201ENST00000006275 XCL1P47992 114 aa12.21□□□□□ -0.45
TRAPPC6A-201ENST00000006275 RNASE13Q5GAN3 156 aaKnown RBP12.21□□□□□ -0.45
TRAPPC6A-201ENST00000006275 AP5S1Q9NUS5 200 aa12.21□□□□□ -0.45
TRAPPC6A-201ENST00000006275 RPL37AP61513 92 aaKnown RBP12.2□□□□□ -0.46
TRAPPC6A-201ENST00000006275 FOXI1Q12951 378 aa12.2□□□□□ -0.46
TRAPPC6A-201ENST00000006275 Q6ZUT4 128 aa12.2□□□□□ -0.46
TRAPPC6A-201ENST00000006275 APOC3P02656 99 aa12.19□□□□□ -0.46
TRAPPC6A-201ENST00000006275 NDUFA5Q16718 116 aa12.19□□□□□ -0.46
TRAPPC6A-201ENST00000006275 KIAA1644Q3SXP7 199 aa12.19□□□□□ -0.46
TRAPPC6A-201ENST00000006275 C15orf56Q8N910 161 aa12.19□□□□□ -0.46
TRAPPC6A-201ENST00000006275 SPANXA1Q9NS26 97 aa12.19□□□□□ -0.46
TRAPPC6A-201ENST00000006275 Q8N8P6 123 aa12.18□□□□□ -0.46
TRAPPC6A-201ENST00000006275 C9orf163Q8N9P6 203 aa12.18□□□□□ -0.46
TRAPPC6A-201ENST00000006275 TRAV13-1A0A0B4J241 112 aa12.17□□□□□ -0.46
TRAPPC6A-201ENST00000006275 C1orf196B1AJZ1 125 aa12.17□□□□□ -0.46
TRAPPC6A-201ENST00000006275 COX19Q49B96 90 aa12.17□□□□□ -0.46
TRAPPC6A-201ENST00000006275 CD164L2Q6UWJ8 174 aa12.17□□□□□ -0.46
TRAPPC6A-201ENST00000006275 GNB1LQ9BYB4 327 aa12.17□□□□□ -0.46
TRAPPC6A-201ENST00000006275 HNRNPA3P51991 378 aaKnown RBP12.16□□□□□ -0.46
TRAPPC6A-201ENST00000006275 CNBPP62633 177 aaKnown RBP12.16□□□□□ -0.46
TRAPPC6A-201ENST00000006275 HIGD2BQ4VC39 106 aa12.16□□□□□ -0.46
TRAPPC6A-201ENST00000006275 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.15□□□□□ -0.46
TRAPPC6A-201ENST00000006275 SNAPINO95295 136 aa12.15□□□□□ -0.46
TRAPPC6A-201ENST00000006275 MRPS36P82909 103 aaKnown RBP12.15□□□□□ -0.46
TRAPPC6A-201ENST00000006275 SVBPQ8N300 66 aa12.15□□□□□ -0.46
TRAPPC6A-201ENST00000006275 NXT2Q9NPJ8 142 aaKnown RBP12.15□□□□□ -0.46
TRAPPC6A-201ENST00000006275 IFI27P40305 119 aaPredicted RBP12.14□□□□□ -0.47
TRAPPC6A-201ENST00000006275 ORMDL2Q53FV1 153 aa12.14□□□□□ -0.47
TRAPPC6A-201ENST00000006275 OPRPNQ99935 248 aaPredicted RBP12.14□□□□□ -0.47
TRAPPC6A-201ENST00000006275 IGHV1-58A0A0C4DH39 117 aa12.13□□□□□ -0.47
TRAPPC6A-201ENST00000006275 SLPIP03973 132 aa12.13□□□□□ -0.47
TRAPPC6A-201ENST00000006275 GVQW2A0A096LPI5 108 aaPredicted RBP12.12□□□□□ -0.47
TRAPPC6A-201ENST00000006275 K7EMI3 77 aa12.12□□□□□ -0.47
TRAPPC6A-201ENST00000006275 MT-ND6P03923 174 aa12.12□□□□□ -0.47
TRAPPC6A-201ENST00000006275 MT1HL1P0DM35 61 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms