RNA–Protein interactions for RNA: ENST00000641891.1

PHGDH-229, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,175 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-229ENST00000641891 MRPS27Q92552 414 aaKnown RBP19.74■□□□□ 0.75
PHGDH-229ENST00000641891 ERCC4Q92889 916 aaPredicted RBP19.74■□□□□ 0.75
PHGDH-229ENST00000641891 POLR3EQ9NVU0 708 aa19.74■□□□□ 0.75
PHGDH-229ENST00000641891 THSD7AQ9UPZ6 1657 aa19.74■□□□□ 0.75
PHGDH-229ENST00000641891 KINO60870 393 aaKnown RBP19.73■□□□□ 0.75
PHGDH-229ENST00000641891 IARSP41252 1262 aaKnown RBP19.73■□□□□ 0.75
PHGDH-229ENST00000641891 SF3A1Q15459 793 aaKnown RBP19.73■□□□□ 0.75
PHGDH-229ENST00000641891 CPLX2Q6PUV4 134 aaKnown RBP19.73■□□□□ 0.75
PHGDH-229ENST00000641891 SPC24Q8NBT2 197 aa19.73■□□□□ 0.75
PHGDH-229ENST00000641891 RIOK1Q9BRS2 568 aaKnown RBP19.73■□□□□ 0.75
PHGDH-229ENST00000641891 NYXQ9GZU5 481 aa19.73■□□□□ 0.75
PHGDH-229ENST00000641891 TFCP2L1Q9NZI6 479 aa19.73■□□□□ 0.75
PHGDH-229ENST00000641891 YEATS4O95619 227 aa19.73■□□□□ 0.75
PHGDH-229ENST00000641891 ZNF165P49910 485 aa19.73■□□□□ 0.75
PHGDH-229ENST00000641891 NDUFA8P51970 172 aa19.73■□□□□ 0.75
PHGDH-229ENST00000641891 RPS8P62241 208 aaKnown RBP19.73■□□□□ 0.75
PHGDH-229ENST00000641891 ADALQ6DHV7 355 aa19.73■□□□□ 0.75
PHGDH-229ENST00000641891 C11orf57Q6ZUT1 292 aaPredicted RBP19.73■□□□□ 0.75
PHGDH-229ENST00000641891 SLC51AQ86UW1 340 aa19.73■□□□□ 0.75
PHGDH-229ENST00000641891 FMR1NBQ8N0W7 255 aaPredicted RBP19.73■□□□□ 0.75
PHGDH-229ENST00000641891 NLRP3Q96P20 1036 aa19.73■□□□□ 0.75
PHGDH-229ENST00000641891 SLC26A6Q9BXS9 759 aa19.73■□□□□ 0.75
PHGDH-229ENST00000641891 SPTLC2O15270 562 aa19.72■□□□□ 0.75
PHGDH-229ENST00000641891 ANO1Q5XXA6 986 aa19.72■□□□□ 0.75
PHGDH-229ENST00000641891 ARHGEF1Q92888 912 aaKnown RBP19.72■□□□□ 0.75
PHGDH-229ENST00000641891 CYP2D7A0A087X1C5 515 aa19.71■□□□□ 0.75
PHGDH-229ENST00000641891 WTAPQ15007 396 aa19.71■□□□□ 0.75
PHGDH-229ENST00000641891 SYNE3Q6ZMZ3 975 aa19.71■□□□□ 0.75
PHGDH-229ENST00000641891 FBXO33Q7Z6M2 555 aa19.71■□□□□ 0.75
PHGDH-229ENST00000641891 KCNG4Q8TDN1 519 aa19.71■□□□□ 0.75
PHGDH-229ENST00000641891 RTCBQ9Y3I0 505 aaKnown RBP19.71■□□□□ 0.75
PHGDH-229ENST00000641891 RGL2O15211 777 aa19.71■□□□□ 0.75
PHGDH-229ENST00000641891 CTAGE5O15320 804 aa19.71■□□□□ 0.75
PHGDH-229ENST00000641891 GUCY1A2P33402 732 aa19.71■□□□□ 0.75
PHGDH-229ENST00000641891 TNRC6CQ9HCJ0 1690 aaKnown RBP19.71■□□□□ 0.74
PHGDH-229ENST00000641891 A0A1W2PQ27 194 aa19.7■□□□□ 0.74
PHGDH-229ENST00000641891 A0A1W2PQ64 194 aa19.7■□□□□ 0.74
PHGDH-229ENST00000641891 A0A1W2PQD8 194 aa19.7■□□□□ 0.74
PHGDH-229ENST00000641891 CMTR1Q8N1G2 835 aaKnown RBP19.7■□□□□ 0.74
PHGDH-229ENST00000641891 TDRD7Q8NHU6 1098 aaKnown RBP19.7■□□□□ 0.74
PHGDH-229ENST00000641891 BAZ2AQ9UIF9 1905 aaKnown RBP19.7■□□□□ 0.74
PHGDH-229ENST00000641891 SSRP1Q08945 709 aaKnown RBP19.7■□□□□ 0.74
PHGDH-229ENST00000641891 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.7■□□□□ 0.74
PHGDH-229ENST00000641891 FMNL1O95466 1100 aaPredicted RBP19.69■□□□□ 0.74
PHGDH-229ENST00000641891 MARCKSP29966 332 aaPredicted RBP19.69■□□□□ 0.74
PHGDH-229ENST00000641891 KIAA2012Q0VF49 1180 aa19.69■□□□□ 0.74
PHGDH-229ENST00000641891 C17orf53Q8N3J3 647 aaPredicted RBP19.69■□□□□ 0.74
PHGDH-229ENST00000641891 CCDC82Q8N4S0 544 aa19.69■□□□□ 0.74
PHGDH-229ENST00000641891 RNF41Q9H4P4 317 aaPredicted RBP19.69■□□□□ 0.74
PHGDH-229ENST00000641891 JAG2Q9Y219 1238 aa19.69■□□□□ 0.74
PHGDH-229ENST00000641891 NID2Q14112 1375 aa19.69■□□□□ 0.74
PHGDH-229ENST00000641891 TAF1LQ8IZX4 1826 aa19.69■□□□□ 0.74
PHGDH-229ENST00000641891 MROH7-TTC4A0A0A0MT08 1334 aa19.69■□□□□ 0.74
PHGDH-229ENST00000641891 WDHD1O75717 1129 aaPredicted RBP19.68■□□□□ 0.74
PHGDH-229ENST00000641891 TM4SF1P30408 202 aa19.68■□□□□ 0.74
PHGDH-229ENST00000641891 EVX2Q03828 476 aa19.68■□□□□ 0.74
PHGDH-229ENST00000641891 GNL2Q13823 731 aaKnown RBP19.68■□□□□ 0.74
PHGDH-229ENST00000641891 SART3Q15020 963 aaKnown RBP19.68■□□□□ 0.74
PHGDH-229ENST00000641891 STX1AQ16623 288 aa19.68■□□□□ 0.74
PHGDH-229ENST00000641891 RTN1Q16799 776 aa19.68■□□□□ 0.74
PHGDH-229ENST00000641891 TPTE2Q6XPS3 522 aa19.68■□□□□ 0.74
PHGDH-229ENST00000641891 STK36Q9NRP7 1315 aa19.68■□□□□ 0.74
PHGDH-229ENST00000641891 ERICH2A1L162 156 aa19.68■□□□□ 0.74
PHGDH-229ENST00000641891 CHAF1AQ13111 956 aaPredicted RBP19.68■□□□□ 0.74
PHGDH-229ENST00000641891 IQCB1Q15051 598 aa19.68■□□□□ 0.74
PHGDH-229ENST00000641891 AXDND1Q5T1B0 1012 aaPredicted RBP19.68■□□□□ 0.74
PHGDH-229ENST00000641891 TXNRD3Q86VQ6 643 aa19.68■□□□□ 0.74
PHGDH-229ENST00000641891 FBXW7Q969H0 707 aa19.68■□□□□ 0.74
PHGDH-229ENST00000641891 KCNF1Q9H3M0 494 aa19.68■□□□□ 0.74
PHGDH-229ENST00000641891 ANAPC4Q9UJX5 808 aa19.68■□□□□ 0.74
PHGDH-229ENST00000641891 MYH13Q9UKX3 1938 aa19.67■□□□□ 0.74
PHGDH-229ENST00000641891 IFNAR1P17181 557 aa19.67■□□□□ 0.74
PHGDH-229ENST00000641891 MECOMQ03112 1051 aa19.67■□□□□ 0.74
PHGDH-229ENST00000641891 TRIM29Q14134 588 aa19.67■□□□□ 0.74
PHGDH-229ENST00000641891 ZNF654Q8IZM8 581 aa19.67■□□□□ 0.74
PHGDH-229ENST00000641891 NUP133Q8WUM0 1156 aa19.67■□□□□ 0.74
PHGDH-229ENST00000641891 NSUN4Q96CB9 384 aaKnown RBP19.67■□□□□ 0.74
PHGDH-229ENST00000641891 DUOX1Q9NRD9 1551 aa19.67■□□□□ 0.74
PHGDH-229ENST00000641891 HIBADHP31937 336 aaKnown RBP19.67■□□□□ 0.74
PHGDH-229ENST00000641891 RGS22Q8NE09 1264 aa19.67■□□□□ 0.74
PHGDH-229ENST00000641891 UBAC1Q9BSL1 405 aa19.67■□□□□ 0.74
PHGDH-229ENST00000641891 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.67■□□□□ 0.74
PHGDH-229ENST00000641891 LY75O60449 1722 aa19.67■□□□□ 0.74
PHGDH-229ENST00000641891 TNKSO95271 1327 aa19.66■□□□□ 0.74
PHGDH-229ENST00000641891 PRDM1O75626 825 aa19.66■□□□□ 0.74
PHGDH-229ENST00000641891 PRDX5P30044 214 aa19.66■□□□□ 0.74
PHGDH-229ENST00000641891 SLC39A14Q15043 492 aa19.66■□□□□ 0.74
PHGDH-229ENST00000641891 SEC23AQ15436 765 aa19.66■□□□□ 0.74
PHGDH-229ENST00000641891 NBPF11Q86T75 865 aa19.66■□□□□ 0.74
PHGDH-229ENST00000641891 SDF4Q9BRK5 362 aa19.66■□□□□ 0.74
PHGDH-229ENST00000641891 NPHP1O15259 732 aa19.66■□□□□ 0.74
PHGDH-229ENST00000641891 U2AF2P26368 475 aaKnown RBP eCLIP19.66■□□□□ 0.744e-10■■□□□ 11.5
PHGDH-229ENST00000641891 ZNF75DP51815 510 aa19.66■□□□□ 0.74
PHGDH-229ENST00000641891 PLA2G4DQ86XP0 818 aa19.66■□□□□ 0.74
PHGDH-229ENST00000641891 MAP3K14Q99558 947 aa19.66■□□□□ 0.74
PHGDH-229ENST00000641891 TRIM5Q9C035 493 aa19.66■□□□□ 0.74
PHGDH-229ENST00000641891 ANKRD2Q9GZV1 360 aa19.66■□□□□ 0.74
PHGDH-229ENST00000641891 KCNJ14Q9UNX9 436 aa19.66■□□□□ 0.74
PHGDH-229ENST00000641891 R3HCC1Q9Y3T6 440 aaKnown RBP19.66■□□□□ 0.74
PHGDH-229ENST00000641891 PFKFB1P16118 471 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms