RNA–Protein interactions for RNA: ENST00000641272.1

PHGDH-213, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-213ENST00000641272 ATAD5Q96QE3 1844 aa20.66■□□□□ 0.9
PHGDH-213ENST00000641272 BRCA2P51587 3418 aa20.65■□□□□ 0.9
PHGDH-213ENST00000641272 ADGRA2Q96PE1 1338 aa20.65■□□□□ 0.9
PHGDH-213ENST00000641272 DDTLA6NHG4 134 aaPredicted RBP20.65■□□□□ 0.9
PHGDH-213ENST00000641272 GNAI2P04899 355 aa20.65■□□□□ 0.9
PHGDH-213ENST00000641272 MECOMQ03112 1051 aa20.65■□□□□ 0.9
PHGDH-213ENST00000641272 MOGSQ13724 837 aa20.65■□□□□ 0.9
PHGDH-213ENST00000641272 ARHGEF6Q15052 776 aa20.65■□□□□ 0.9
PHGDH-213ENST00000641272 ANKRD23Q86SG2 305 aa20.65■□□□□ 0.9
PHGDH-213ENST00000641272 CCDC84Q86UT8 332 aaPredicted RBP20.65■□□□□ 0.9
PHGDH-213ENST00000641272 ZNF384Q8TF68 577 aa20.65■□□□□ 0.9
PHGDH-213ENST00000641272 IDI2Q9BXS1 227 aa20.65■□□□□ 0.9
PHGDH-213ENST00000641272 HMG20BQ9P0W2 317 aa20.65■□□□□ 0.9
PHGDH-213ENST00000641272 MGAMO43451 1857 aa20.64■□□□□ 0.9
PHGDH-213ENST00000641272 FAM196BA6NMK8 535 aa20.64■□□□□ 0.89
PHGDH-213ENST00000641272 IPO8O15397 1037 aaKnown RBP20.64■□□□□ 0.89
PHGDH-213ENST00000641272 ENTPD3O75355 529 aa20.64■□□□□ 0.89
PHGDH-213ENST00000641272 CTGFP29279 349 aa20.64■□□□□ 0.89
PHGDH-213ENST00000641272 GORABQ5T7V8 394 aa20.64■□□□□ 0.89
PHGDH-213ENST00000641272 TBC1D9Q6ZT07 1266 aa20.64■□□□□ 0.89
PHGDH-213ENST00000641272 ERICH6Q7L0X2 663 aa20.64■□□□□ 0.89
PHGDH-213ENST00000641272 SCYL3Q8IZE3 742 aa20.64■□□□□ 0.89
PHGDH-213ENST00000641272 TMEM57Q8N5G2 664 aa20.64■□□□□ 0.89
PHGDH-213ENST00000641272 PHF20L1A8MW92 1017 aa20.63■□□□□ 0.89
PHGDH-213ENST00000641272 SPTY2D1Q68D10 685 aaPredicted RBP20.63■□□□□ 0.89
PHGDH-213ENST00000641272 C17orf99Q6UX52 265 aa20.63■□□□□ 0.89
PHGDH-213ENST00000641272 C1orf115Q9H7X2 142 aa20.63■□□□□ 0.89
PHGDH-213ENST00000641272 PICK1Q9NRD5 415 aa20.63■□□□□ 0.89
PHGDH-213ENST00000641272 MKI67P46013 3256 aaKnown RBP20.63■□□□□ 0.89
PHGDH-213ENST00000641272 CYP2C8P10632 490 aa20.62■□□□□ 0.89
PHGDH-213ENST00000641272 SLC4A8Q2Y0W8 1093 aa20.62■□□□□ 0.89
PHGDH-213ENST00000641272 GADL1Q6ZQY3 521 aa20.62■□□□□ 0.89
PHGDH-213ENST00000641272 SLF2Q8IX21 1173 aa20.62■□□□□ 0.89
PHGDH-213ENST00000641272 TRIM47Q96LD4 638 aa20.62■□□□□ 0.89
PHGDH-213ENST00000641272 TMEM106CQ9BVX2 250 aa20.62■□□□□ 0.89
PHGDH-213ENST00000641272 RAI14Q9P0K7 980 aa20.62■□□□□ 0.89
PHGDH-213ENST00000641272 MYO5AQ9Y4I1 1855 aaKnown RBP20.62■□□□□ 0.89
PHGDH-213ENST00000641272 MCAMP43121 646 aa20.61■□□□□ 0.89
PHGDH-213ENST00000641272 PSMC4P43686 418 aa20.61■□□□□ 0.89
PHGDH-213ENST00000641272 RHBDL3P58872 404 aa20.61■□□□□ 0.89
PHGDH-213ENST00000641272 G3BP1Q13283 466 aaKnown RBP eCLIP20.61■□□□□ 0.895e-7■■■■□ 20.9
PHGDH-213ENST00000641272 SPATA5Q8NB90 893 aa20.61■□□□□ 0.89
PHGDH-213ENST00000641272 PARK7Q99497 189 aaKnown RBP20.61■□□□□ 0.89
PHGDH-213ENST00000641272 ZHX2Q9Y6X8 837 aa20.61■□□□□ 0.89
PHGDH-213ENST00000641272 SIPA1L1O43166 1804 aa20.61■□□□□ 0.89
PHGDH-213ENST00000641272 CDK5RAP2Q96SN8 1893 aa20.6■□□□□ 0.89
PHGDH-213ENST00000641272 ZBTB22O15209 634 aa20.6■□□□□ 0.89
PHGDH-213ENST00000641272 PTPRAP18433 802 aa20.6■□□□□ 0.89
PHGDH-213ENST00000641272 OSBPP22059 807 aa20.6■□□□□ 0.89
PHGDH-213ENST00000641272 ARID4AP29374 1257 aaPredicted RBP20.6■□□□□ 0.89
PHGDH-213ENST00000641272 HNRNPUQ00839 825 aaKnown RBP eCLIP20.6■□□□□ 0.89
PHGDH-213ENST00000641272 ZKSCAN2Q63HK3 967 aa20.6■□□□□ 0.89
PHGDH-213ENST00000641272 GPAT2Q6NUI2 795 aa20.6■□□□□ 0.89
PHGDH-213ENST00000641272 NBPF11Q86T75 865 aa20.6■□□□□ 0.89
PHGDH-213ENST00000641272 GPR75-ASB3A0A0A6YYF3 556 aa20.59■□□□□ 0.89
PHGDH-213ENST00000641272 TRIM75PA6NK02 468 aa20.59■□□□□ 0.89
PHGDH-213ENST00000641272 FMNL1O95466 1100 aaPredicted RBP20.59■□□□□ 0.89
PHGDH-213ENST00000641272 NSUN4Q96CB9 384 aaKnown RBP20.59■□□□□ 0.89
PHGDH-213ENST00000641272 FAM163AQ96GL9 167 aaPredicted RBP20.59■□□□□ 0.89
PHGDH-213ENST00000641272 SNRKQ9NRH2 765 aa20.59■□□□□ 0.89
PHGDH-213ENST00000641272 LOC285556D6RIA3 1793 aa20.59■□□□□ 0.89
PHGDH-213ENST00000641272 MYPNQ86TC9 1320 aa20.58■□□□□ 0.89
PHGDH-213ENST00000641272 A0A0G2JLL6 359 aaPredicted RBP20.58■□□□□ 0.89
PHGDH-213ENST00000641272 CXCL11O14625 94 aa20.58■□□□□ 0.89
PHGDH-213ENST00000641272 OS9Q13438 667 aaPredicted RBP20.58■□□□□ 0.89
PHGDH-213ENST00000641272 PRRT2Q7Z6L0 340 aaPredicted RBP20.58■□□□□ 0.89
PHGDH-213ENST00000641272 SRRDQ9UH36 339 aa20.58■□□□□ 0.89
PHGDH-213ENST00000641272 FOCADQ5VW36 1801 aa20.57■□□□□ 0.88
PHGDH-213ENST00000641272 MTFR1Q15390 333 aa20.57■□□□□ 0.88
PHGDH-213ENST00000641272 DBNDD2Q9BQY9 259 aa20.57■□□□□ 0.88
PHGDH-213ENST00000641272 AFG3L2Q9Y4W6 797 aa20.57■□□□□ 0.88
PHGDH-213ENST00000641272 GSTO1P78417 241 aa20.56■□□□□ 0.88
PHGDH-213ENST00000641272 TTC39AQ5SRH9 613 aa20.56■□□□□ 0.88
PHGDH-213ENST00000641272 ITPRIPQ8IWB1 547 aa20.56■□□□□ 0.88
PHGDH-213ENST00000641272 FTSJ3Q8IY81 847 aaKnown RBP20.56■□□□□ 0.88
PHGDH-213ENST00000641272 TEX11Q8IYF3 940 aa20.56■□□□□ 0.88
PHGDH-213ENST00000641272 RAET1EQ8TD07 263 aa20.56■□□□□ 0.88
PHGDH-213ENST00000641272 OSBPL5Q9H0X9 879 aaPredicted RBP20.56■□□□□ 0.88
PHGDH-213ENST00000641272 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.56■□□□□ 0.882e-7■■■■□ 19.6
PHGDH-213ENST00000641272 LRP2BPQ9P2M1 347 aa20.56■□□□□ 0.88
PHGDH-213ENST00000641272 COL2A1P02458 1487 aaPredicted RBP20.56■□□□□ 0.88
PHGDH-213ENST00000641272 GNRH1P01148 92 aa20.55■□□□□ 0.88
PHGDH-213ENST00000641272 BCRP11274 1271 aa20.55■□□□□ 0.88
PHGDH-213ENST00000641272 PRMT2P55345 433 aa20.55■□□□□ 0.88
PHGDH-213ENST00000641272 PRKCZQ05513 592 aa20.55■□□□□ 0.88
PHGDH-213ENST00000641272 POLA2Q14181 598 aa20.55■□□□□ 0.88
PHGDH-213ENST00000641272 TNNI3KQ59H18 835 aa20.55■□□□□ 0.88
PHGDH-213ENST00000641272 SH3RF3Q8TEJ3 882 aaPredicted RBP20.55■□□□□ 0.88
PHGDH-213ENST00000641272 FPGT-TNNI3KV9GXZ4 949 aa20.55■□□□□ 0.88
PHGDH-213ENST00000641272 CTNND1O60716 968 aaKnown RBP20.54■□□□□ 0.88
PHGDH-213ENST00000641272 LDHCP07864 332 aa20.54■□□□□ 0.88
PHGDH-213ENST00000641272 UQCRFS1P1P0C7P4 283 aa20.54■□□□□ 0.88
PHGDH-213ENST00000641272 RLBP1P12271 317 aa20.54■□□□□ 0.88
PHGDH-213ENST00000641272 FASTKD5Q7L8L6 764 aaKnown RBP20.54■□□□□ 0.88
PHGDH-213ENST00000641272 FCGRTP55899 365 aa20.53■□□□□ 0.88
PHGDH-213ENST00000641272 MAP3K10Q02779 954 aa20.53■□□□□ 0.88
PHGDH-213ENST00000641272 TREML2Q5T2D2 321 aa20.53■□□□□ 0.88
PHGDH-213ENST00000641272 SMCR8Q8TEV9 937 aaPredicted RBP20.53■□□□□ 0.88
PHGDH-213ENST00000641272 SHISA4Q96DD7 197 aa20.53■□□□□ 0.88
PHGDH-213ENST00000641272 AATFQ9NY61 560 aaKnown RBP eCLIP20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms