RNA–Protein interactions for RNA: ENST00000640463.1

SPIN3-239, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 3,133 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-239ENST00000640463 XIRP1Q702N8 1843 aaKnown RBP16.11■□□□□ 0.17
SPIN3-239ENST00000640463 ARID4AP29374 1257 aaPredicted RBP16.1■□□□□ 0.17
SPIN3-239ENST00000640463 PDE4CQ08493 712 aa16.1■□□□□ 0.17
SPIN3-239ENST00000640463 SPATA5Q8NB90 893 aa16.1■□□□□ 0.17
SPIN3-239ENST00000640463 BTG4Q9NY30 223 aa16.1■□□□□ 0.17
SPIN3-239ENST00000640463 HPSEQ9Y251 543 aa16.1■□□□□ 0.17
SPIN3-239ENST00000640463 SLC12A7Q9Y666 1083 aa16.1■□□□□ 0.17
SPIN3-239ENST00000640463 MYH3P11055 1940 aa16.1■□□□□ 0.17
SPIN3-239ENST00000640463 RASGRF1Q13972 1273 aa16.1■□□□□ 0.17
SPIN3-239ENST00000640463 FOXP4Q8IVH2 680 aaPredicted RBP16.1■□□□□ 0.17
SPIN3-239ENST00000640463 KIF18AQ8NI77 898 aa16.1■□□□□ 0.17
SPIN3-239ENST00000640463 TMEM87BQ96K49 555 aa16.1■□□□□ 0.17
SPIN3-239ENST00000640463 ZNF512BQ96KM6 892 aaPredicted RBP16.1■□□□□ 0.17
SPIN3-239ENST00000640463 SEC31BQ9NQW1 1179 aa16.1■□□□□ 0.17
SPIN3-239ENST00000640463 BTBD18B2RXH4 712 aa16.1■□□□□ 0.17
SPIN3-239ENST00000640463 PUM3Q15397 648 aaKnown RBP16.1■□□□□ 0.17
SPIN3-239ENST00000640463 METTL16Q86W50 562 aaKnown RBP16.1■□□□□ 0.17
SPIN3-239ENST00000640463 DZIP3Q86Y13 1208 aaKnown RBP16.1■□□□□ 0.17
SPIN3-239ENST00000640463 PPP1R13BQ96KQ4 1090 aa16.1■□□□□ 0.17
SPIN3-239ENST00000640463 ZHX1Q9UKY1 873 aaPredicted RBP16.1■□□□□ 0.17
SPIN3-239ENST00000640463 PATL2C9JE40 543 aaKnown RBP16.09■□□□□ 0.17
SPIN3-239ENST00000640463 PPP6R2O75170 966 aa16.09■□□□□ 0.17
SPIN3-239ENST00000640463 ATRNO75882 1429 aa16.09■□□□□ 0.17
SPIN3-239ENST00000640463 GRIN1Q05586 938 aa16.09■□□□□ 0.17
SPIN3-239ENST00000640463 SYCP1Q15431 976 aa16.09■□□□□ 0.17
SPIN3-239ENST00000640463 SYT10Q6XYQ8 523 aa16.09■□□□□ 0.17
SPIN3-239ENST00000640463 TUBE1Q9UJT0 475 aa16.09■□□□□ 0.17
SPIN3-239ENST00000640463 ECM29Q5VYK3 1845 aa16.09■□□□□ 0.17
SPIN3-239ENST00000640463 SERPINC1P01008 464 aa16.09■□□□□ 0.17
SPIN3-239ENST00000640463 ATP2B1P20020 1258 aa16.09■□□□□ 0.17
SPIN3-239ENST00000640463 SSRP1Q08945 709 aaKnown RBP16.09■□□□□ 0.17
SPIN3-239ENST00000640463 LPIN2Q92539 896 aa16.09■□□□□ 0.17
SPIN3-239ENST00000640463 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.09■□□□□ 0.17
SPIN3-239ENST00000640463 UQCRFS1P1P0C7P4 283 aa16.08■□□□□ 0.17
SPIN3-239ENST00000640463 UBASH3AP57075 661 aa16.08■□□□□ 0.17
SPIN3-239ENST00000640463 ELF2Q15723 593 aa16.08■□□□□ 0.17
SPIN3-239ENST00000640463 RESP18Q5W5W9 173 aa16.08■□□□□ 0.17
SPIN3-239ENST00000640463 JMYQ8N9B5 988 aa16.08■□□□□ 0.17
SPIN3-239ENST00000640463 MIGA1Q8NAN2 632 aa16.08■□□□□ 0.17
SPIN3-239ENST00000640463 CCDC150Q8NCX0 1101 aa16.08■□□□□ 0.17
SPIN3-239ENST00000640463 CNNM3Q8NE01 707 aa16.08■□□□□ 0.17
SPIN3-239ENST00000640463 KCNH3Q9ULD8 1083 aa16.08■□□□□ 0.17
SPIN3-239ENST00000640463 TMEM232C9JQI7 657 aa16.08■□□□□ 0.16
SPIN3-239ENST00000640463 CFAP100Q494V2 611 aa16.08■□□□□ 0.16
SPIN3-239ENST00000640463 TIGD1Q96MW7 591 aa16.08■□□□□ 0.16
SPIN3-239ENST00000640463 IQSEC3Q9UPP2 1182 aaPredicted RBP16.08■□□□□ 0.16
SPIN3-239ENST00000640463 PCDHA5Q9Y5H7 936 aa16.08■□□□□ 0.16
SPIN3-239ENST00000640463 ITGB4P16144 1822 aa16.08■□□□□ 0.16
SPIN3-239ENST00000640463 NUP98P52948 1817 aa16.08■□□□□ 0.16
SPIN3-239ENST00000640463 GSG1L2A8MUP6 293 aa16.08■□□□□ 0.16
SPIN3-239ENST00000640463 FGFR2P21802 821 aa16.08■□□□□ 0.16
SPIN3-239ENST00000640463 LCORLQ8N3X6 602 aa16.08■□□□□ 0.16
SPIN3-239ENST00000640463 FANCLQ9NW38 375 aa16.08■□□□□ 0.16
SPIN3-239ENST00000640463 BCAMP50895 628 aa16.07■□□□□ 0.16
SPIN3-239ENST00000640463 PDE4BQ07343 736 aa16.07■□□□□ 0.16
SPIN3-239ENST00000640463 MAP3K12Q12852 859 aa16.07■□□□□ 0.16
SPIN3-239ENST00000640463 SGMS1Q86VZ5 419 aa16.07■□□□□ 0.16
SPIN3-239ENST00000640463 LRRN4CLQ8ND94 238 aa16.07■□□□□ 0.16
SPIN3-239ENST00000640463 CGNQ9P2M7 1197 aaKnown RBP16.07■□□□□ 0.16
SPIN3-239ENST00000640463 SMIM22K7EJ46 135 aa16.07■□□□□ 0.16
SPIN3-239ENST00000640463 IKBKBO14920 756 aa16.07■□□□□ 0.16
SPIN3-239ENST00000640463 TDO2P48775 406 aa16.07■□□□□ 0.16
SPIN3-239ENST00000640463 MYL5Q02045 173 aa16.07■□□□□ 0.16
SPIN3-239ENST00000640463 MFSD6Q6ZSS7 791 aa16.07■□□□□ 0.16
SPIN3-239ENST00000640463 BMP6P22004 513 aa16.06■□□□□ 0.16
SPIN3-239ENST00000640463 TOB1P50616 345 aaPredicted RBP16.06■□□□□ 0.16
SPIN3-239ENST00000640463 DMTNQ08495 405 aa16.06■□□□□ 0.16
SPIN3-239ENST00000640463 KMT5BQ4FZB7 885 aa16.06■□□□□ 0.16
SPIN3-239ENST00000640463 AKNAD1Q5T1N1 836 aa16.06■□□□□ 0.16
SPIN3-239ENST00000640463 KRBA2Q6ZNG9 492 aa16.06■□□□□ 0.16
SPIN3-239ENST00000640463 MPHOSPH8Q99549 860 aa16.06■□□□□ 0.16
SPIN3-239ENST00000640463 SLC4A4Q9Y6R1 1079 aa16.06■□□□□ 0.16
SPIN3-239ENST00000640463 SLC5A1P13866 664 aa16.06■□□□□ 0.16
SPIN3-239ENST00000640463 NR5A1Q13285 461 aa16.06■□□□□ 0.16
SPIN3-239ENST00000640463 SUSD4Q5VX71 490 aa16.06■□□□□ 0.16
SPIN3-239ENST00000640463 DIS3L2Q8IYB7 885 aaKnown RBP16.06■□□□□ 0.16
SPIN3-239ENST00000640463 GRAMD1CQ8IYS0 662 aa16.06■□□□□ 0.16
SPIN3-239ENST00000640463 NUP133Q8WUM0 1156 aa16.06■□□□□ 0.16
SPIN3-239ENST00000640463 CUTAO60888 179 aa16.05■□□□□ 0.16
SPIN3-239ENST00000640463 ZNF827Q17R98 1081 aa16.05■□□□□ 0.16
SPIN3-239ENST00000640463 OLFM4Q6UX06 510 aa16.05■□□□□ 0.16
SPIN3-239ENST00000640463 NOSTRINQ8IVI9 506 aa16.05■□□□□ 0.16
SPIN3-239ENST00000640463 CHD4Q14839 1912 aa16.05■□□□□ 0.16
SPIN3-239ENST00000640463 SLU7O95391 586 aaKnown RBP16.05■□□□□ 0.16
SPIN3-239ENST00000640463 FMNL1O95466 1100 aaPredicted RBP16.05■□□□□ 0.16
SPIN3-239ENST00000640463 LIFRP42702 1097 aa16.05■□□□□ 0.16
SPIN3-239ENST00000640463 HOMER1Q86YM7 354 aa16.05■□□□□ 0.16
SPIN3-239ENST00000640463 PDILTQ8N807 584 aa16.05■□□□□ 0.16
SPIN3-239ENST00000640463 MROH5Q6ZUA9 1318 aa16.05■□□□□ 0.16
SPIN3-239ENST00000640463 ALX1Q15699 326 aa16.05■□□□□ 0.16
SPIN3-239ENST00000640463 KRI1Q8N9T8 703 aaKnown RBP16.05■□□□□ 0.16
SPIN3-239ENST00000640463 FEZ1Q99689 392 aa16.05■□□□□ 0.16
SPIN3-239ENST00000640463 KCND1Q9NSA2 647 aa16.05■□□□□ 0.16
SPIN3-239ENST00000640463 ZNF335Q9H4Z2 1342 aaPredicted RBP16.05■□□□□ 0.16
SPIN3-239ENST00000640463 PRR29P0C7W0 189 aa16.04■□□□□ 0.16
SPIN3-239ENST00000640463 RTN1Q16799 776 aa16.04■□□□□ 0.16
SPIN3-239ENST00000640463 ZNF34Q8IZ26 560 aa16.04■□□□□ 0.16
SPIN3-239ENST00000640463 ERO1AQ96HE7 468 aa16.04■□□□□ 0.16
SPIN3-239ENST00000640463 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.04■□□□□ 0.16
SPIN3-239ENST00000640463 OGFRQ9NZT2 677 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms