RNA–Protein interactions for RNA: ENST00000640056.1

HNRNPU-224, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-224ENST00000640056 TICAM2Q86XR7 235 aa11.6□□□□□ -0.55
HNRNPU-224ENST00000640056 DNAJC2Q99543 621 aaKnown RBP11.6□□□□□ -0.55
HNRNPU-224ENST00000640056 SH3TC1Q8TE82 1336 aa11.6□□□□□ -0.55
HNRNPU-224ENST00000640056 PITPNM2Q9BZ72 1349 aa11.6□□□□□ -0.55
HNRNPU-224ENST00000640056 ARFGEF1Q9Y6D6 1849 aa11.6□□□□□ -0.55
HNRNPU-224ENST00000640056 KLRG2A4D1S0 409 aaPredicted RBP11.59□□□□□ -0.55
HNRNPU-224ENST00000640056 CHGBP05060 677 aa11.59□□□□□ -0.55
HNRNPU-224ENST00000640056 LMNB1P20700 586 aa11.59□□□□□ -0.55
HNRNPU-224ENST00000640056 SFPQP23246 707 aaKnown RBP eCLIP11.59□□□□□ -0.55
HNRNPU-224ENST00000640056 CTCFP49711 727 aaPredicted RBP11.59□□□□□ -0.55
HNRNPU-224ENST00000640056 FOSBP53539 338 aa11.59□□□□□ -0.55
HNRNPU-224ENST00000640056 PRPF38BQ5VTL8 546 aaKnown RBP11.59□□□□□ -0.55
HNRNPU-224ENST00000640056 ARMCX5Q6P1M9 558 aa11.59□□□□□ -0.55
HNRNPU-224ENST00000640056 KBTBD3Q8NAB2 608 aa11.59□□□□□ -0.55
HNRNPU-224ENST00000640056 ERCC4Q92889 916 aaPredicted RBP11.59□□□□□ -0.55
HNRNPU-224ENST00000640056 MASTLQ96GX5 879 aa11.59□□□□□ -0.55
HNRNPU-224ENST00000640056 METTL22Q9BUU2 404 aaPredicted RBP11.59□□□□□ -0.55
HNRNPU-224ENST00000640056 DSCC1Q9BVC3 393 aa11.59□□□□□ -0.55
HNRNPU-224ENST00000640056 XPO4Q9C0E2 1151 aaKnown RBP11.59□□□□□ -0.55
HNRNPU-224ENST00000640056 NYXQ9GZU5 481 aa11.59□□□□□ -0.55
HNRNPU-224ENST00000640056 HELLSQ9NRZ9 838 aa11.59□□□□□ -0.55
HNRNPU-224ENST00000640056 RNF181Q9P0P0 153 aa11.59□□□□□ -0.55
HNRNPU-224ENST00000640056 NIP7Q9Y221 180 aaKnown RBP eCLIP11.59□□□□□ -0.55
HNRNPU-224ENST00000640056 PDE4DIPQ5VU43 2346 aa11.59□□□□□ -0.55
HNRNPU-224ENST00000640056 FOXN1O15353 648 aa11.59□□□□□ -0.55
HNRNPU-224ENST00000640056 SRGNP10124 158 aa11.59□□□□□ -0.55
HNRNPU-224ENST00000640056 PDIA3P30101 505 aaKnown RBP11.59□□□□□ -0.55
HNRNPU-224ENST00000640056 NDUFA8P51970 172 aa11.59□□□□□ -0.55
HNRNPU-224ENST00000640056 TPM4P67936 248 aa11.59□□□□□ -0.55
HNRNPU-224ENST00000640056 ERCC6LQ2NKX8 1250 aa11.59□□□□□ -0.55
HNRNPU-224ENST00000640056 SYT10Q6XYQ8 523 aa11.59□□□□□ -0.55
HNRNPU-224ENST00000640056 LINC00301Q8NCQ3 95 aa11.59□□□□□ -0.55
HNRNPU-224ENST00000640056 IFNKQ9P0W0 207 aa11.59□□□□□ -0.55
HNRNPU-224ENST00000640056 NDUFB9Q9Y6M9 179 aa11.59□□□□□ -0.55
HNRNPU-224ENST00000640056 MAP3K15Q6ZN16 1313 aa11.58□□□□□ -0.56
HNRNPU-224ENST00000640056 LTBP3Q9NS15 1303 aa11.58□□□□□ -0.56
HNRNPU-224ENST00000640056 BCORQ6W2J9 1755 aa11.58□□□□□ -0.56
HNRNPU-224ENST00000640056 A0A1B0GVL5 298 aa11.58□□□□□ -0.56
HNRNPU-224ENST00000640056 CCP110O43303 1012 aa11.58□□□□□ -0.56
HNRNPU-224ENST00000640056 SMC2O95347 1197 aa11.58□□□□□ -0.56
HNRNPU-224ENST00000640056 PIP4K2AP48426 406 aaPredicted RBP11.58□□□□□ -0.56
HNRNPU-224ENST00000640056 DPCR1Q3MIW9 517 aa11.58□□□□□ -0.56
HNRNPU-224ENST00000640056 DDX46Q7L014 1031 aaKnown RBP11.58□□□□□ -0.56
HNRNPU-224ENST00000640056 TMC6Q7Z403 805 aa11.58□□□□□ -0.56
HNRNPU-224ENST00000640056 FBXL16Q8N461 479 aa11.58□□□□□ -0.56
HNRNPU-224ENST00000640056 KCNG4Q8TDN1 519 aa11.58□□□□□ -0.56
HNRNPU-224ENST00000640056 FBXW7Q969H0 707 aa11.58□□□□□ -0.56
HNRNPU-224ENST00000640056 ZNF622Q969S3 477 aaKnown RBP eCLIP11.58□□□□□ -0.561e-19■■□□□ 13.1
HNRNPU-224ENST00000640056 MYD88Q99836 296 aa11.58□□□□□ -0.56
HNRNPU-224ENST00000640056 DBNDD2Q9BQY9 259 aa11.58□□□□□ -0.56
HNRNPU-224ENST00000640056 NCOA5Q9HCD5 579 aaKnown RBP11.58□□□□□ -0.56
HNRNPU-224ENST00000640056 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.58□□□□□ -0.561e-13■■■□□ 17.2
HNRNPU-224ENST00000640056 LAMB4A4D0S4 1761 aa11.57□□□□□ -0.56
HNRNPU-224ENST00000640056 E7EWF7 191 aa11.57□□□□□ -0.56
HNRNPU-224ENST00000640056 NPR1P16066 1061 aa11.57□□□□□ -0.56
HNRNPU-224ENST00000640056 NLRP12P59046 1061 aa11.57□□□□□ -0.56
HNRNPU-224ENST00000640056 GUCY1B3Q02153 619 aa11.57□□□□□ -0.56
HNRNPU-224ENST00000640056 SF3A1Q15459 793 aaKnown RBP11.57□□□□□ -0.56
HNRNPU-224ENST00000640056 RABL6Q3YEC7 729 aaPredicted RBP11.57□□□□□ -0.56
HNRNPU-224ENST00000640056 FHOD1Q9Y613 1164 aa11.57□□□□□ -0.56
HNRNPU-224ENST00000640056 RIC1Q4ADV7 1423 aa11.57□□□□□ -0.56
HNRNPU-224ENST00000640056 YEATS4O95619 227 aa11.57□□□□□ -0.56
HNRNPU-224ENST00000640056 FDPSP14324 419 aaKnown RBP11.57□□□□□ -0.56
HNRNPU-224ENST00000640056 EVCP57679 992 aa11.57□□□□□ -0.56
HNRNPU-224ENST00000640056 ETF1P62495 437 aaKnown RBP11.57□□□□□ -0.56
HNRNPU-224ENST00000640056 STK38Q15208 465 aa11.57□□□□□ -0.56
HNRNPU-224ENST00000640056 COPS6Q7L5N1 327 aa11.57□□□□□ -0.56
HNRNPU-224ENST00000640056 XAGE3Q8WTP9 111 aa11.57□□□□□ -0.56
HNRNPU-224ENST00000640056 POLR3EQ9NVU0 708 aa11.57□□□□□ -0.56
HNRNPU-224ENST00000640056 DLEC1Q9Y238 1755 aa11.56□□□□□ -0.56
HNRNPU-224ENST00000640056 AFDNP55196 1824 aaKnown RBP11.56□□□□□ -0.56
HNRNPU-224ENST00000640056 MYH15Q9Y2K3 1946 aa11.56□□□□□ -0.56
HNRNPU-224ENST00000640056 A0A0U1RQG5 324 aaPredicted RBP11.56□□□□□ -0.56
HNRNPU-224ENST00000640056 SLC3A2P08195 630 aaKnown RBP11.56□□□□□ -0.56
HNRNPU-224ENST00000640056 MYL6BP14649 208 aa11.56□□□□□ -0.56
HNRNPU-224ENST00000640056 CLCN6P51797 869 aa11.56□□□□□ -0.56
HNRNPU-224ENST00000640056 NCAPHQ15003 741 aa11.56□□□□□ -0.56
HNRNPU-224ENST00000640056 ANKRD13DQ6ZTN6 518 aa11.56□□□□□ -0.56
HNRNPU-224ENST00000640056 TIGD1Q96MW7 591 aa11.56□□□□□ -0.56
HNRNPU-224ENST00000640056 NOL10Q9BSC4 688 aaKnown RBP11.56□□□□□ -0.56
HNRNPU-224ENST00000640056 CALCOCO1Q9P1Z2 691 aa11.56□□□□□ -0.56
HNRNPU-224ENST00000640056 NEDD4P46934 1319 aa11.55□□□□□ -0.56
HNRNPU-224ENST00000640056 PHLPP2Q6ZVD8 1323 aa11.55□□□□□ -0.56
HNRNPU-224ENST00000640056 IKBKBO14920 756 aa11.55□□□□□ -0.56
HNRNPU-224ENST00000640056 SPTLC2O15270 562 aa11.55□□□□□ -0.56
HNRNPU-224ENST00000640056 ZNF202O95125 648 aa11.55□□□□□ -0.56
HNRNPU-224ENST00000640056 HSPD1P10809 573 aaKnown RBP11.55□□□□□ -0.56
HNRNPU-224ENST00000640056 GTF2E1P29083 439 aaPredicted RBP11.55□□□□□ -0.56
HNRNPU-224ENST00000640056 ALDH1B1P30837 517 aa11.55□□□□□ -0.56
HNRNPU-224ENST00000640056 HLFQ16534 295 aa11.55□□□□□ -0.56
HNRNPU-224ENST00000640056 ARHGAP29Q52LW3 1261 aa11.55□□□□□ -0.56
HNRNPU-224ENST00000640056 PARP10Q53GL7 1025 aa11.55□□□□□ -0.56
HNRNPU-224ENST00000640056 ZMYM1Q5SVZ6 1142 aa11.55□□□□□ -0.56
HNRNPU-224ENST00000640056 GIGYF2Q6Y7W6 1299 aaKnown RBP11.55□□□□□ -0.56
HNRNPU-224ENST00000640056 HOMER1Q86YM7 354 aa11.55□□□□□ -0.56
HNRNPU-224ENST00000640056 SRRTQ9BXP5 876 aaKnown RBP11.55□□□□□ -0.56
HNRNPU-224ENST00000640056 NAP1L2Q9ULW6 460 aaPredicted RBP11.55□□□□□ -0.56
HNRNPU-224ENST00000640056 CLIC4Q9Y696 253 aa11.55□□□□□ -0.56
HNRNPU-224ENST00000640056 NFKBIEO00221 500 aa11.55□□□□□ -0.56
HNRNPU-224ENST00000640056 CYP2C19P33261 490 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms