RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 ZNF804AQ7Z570 1209 aa17.63■□□□□ 0.41
TRIM3-215ENST00000639856 DDX19AQ9NUU7 478 aaKnown RBP17.63■□□□□ 0.41
TRIM3-215ENST00000639856 CCDC39Q9UFE4 941 aa17.63■□□□□ 0.41
TRIM3-215ENST00000639856 HPS5Q9UPZ3 1129 aa17.63■□□□□ 0.41
TRIM3-215ENST00000639856 GOLGA8BA8MQT2 603 aa17.63■□□□□ 0.41
TRIM3-215ENST00000639856 SMIM22K7EJ46 135 aa17.63■□□□□ 0.41
TRIM3-215ENST00000639856 ATP2B4P23634 1241 aa17.63■□□□□ 0.41
TRIM3-215ENST00000639856 FOSBP53539 338 aa17.63■□□□□ 0.41
TRIM3-215ENST00000639856 SLC15A2Q16348 729 aa17.63■□□□□ 0.41
TRIM3-215ENST00000639856 GRIK5Q16478 980 aa17.63■□□□□ 0.41
TRIM3-215ENST00000639856 STK11IPQ8N1F8 1099 aa17.63■□□□□ 0.41
TRIM3-215ENST00000639856 TBC1D16Q8TBP0 767 aa17.63■□□□□ 0.41
TRIM3-215ENST00000639856 NACAP1Q9BZK3 213 aa17.63■□□□□ 0.41
TRIM3-215ENST00000639856 PODXL2Q9NZ53 605 aa17.62■□□□□ 0.41
TRIM3-215ENST00000639856 PPFIA3O75145 1194 aa17.62■□□□□ 0.41
TRIM3-215ENST00000639856 RAB11FIP4Q86YS3 637 aa17.62■□□□□ 0.41
TRIM3-215ENST00000639856 BICD2Q8TD16 824 aa17.62■□□□□ 0.41
TRIM3-215ENST00000639856 TNMDQ9H2S6 317 aa17.62■□□□□ 0.41
TRIM3-215ENST00000639856 AATFQ9NY61 560 aaKnown RBP eCLIP17.62■□□□□ 0.41
TRIM3-215ENST00000639856 RCOR1Q9UKL0 485 aa17.62■□□□□ 0.41
TRIM3-215ENST00000639856 NPR1P16066 1061 aa17.61■□□□□ 0.41
TRIM3-215ENST00000639856 CAMK4Q16566 473 aa17.61■□□□□ 0.41
TRIM3-215ENST00000639856 CD209Q9NNX6 404 aa17.61■□□□□ 0.41
TRIM3-215ENST00000639856 USP25Q9UHP3 1055 aa17.61■□□□□ 0.41
TRIM3-215ENST00000639856 ANGEL1Q9UNK9 670 aaKnown RBP17.61■□□□□ 0.41
TRIM3-215ENST00000639856 C6orf229H3BNL8 230 aa17.6■□□□□ 0.41
TRIM3-215ENST00000639856 ZBTB22O15209 634 aa17.6■□□□□ 0.41
TRIM3-215ENST00000639856 NR1I2O75469 434 aa17.6■□□□□ 0.41
TRIM3-215ENST00000639856 GUCY1B3Q02153 619 aa17.6■□□□□ 0.41
TRIM3-215ENST00000639856 AKNAD1Q5T1N1 836 aa17.6■□□□□ 0.41
TRIM3-215ENST00000639856 RBM43Q6ZSC3 357 aaKnown RBP17.6■□□□□ 0.41
TRIM3-215ENST00000639856 SP8Q8IXZ3 490 aa17.6■□□□□ 0.41
TRIM3-215ENST00000639856 ZNF396Q96N95 335 aaPredicted RBP17.6■□□□□ 0.41
TRIM3-215ENST00000639856 SENP2Q9HC62 589 aa17.6■□□□□ 0.41
TRIM3-215ENST00000639856 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.6■□□□□ 0.41
TRIM3-215ENST00000639856 ATP6V0A2Q9Y487 856 aa17.6■□□□□ 0.41
TRIM3-215ENST00000639856 PDE6BP35913 854 aa17.6■□□□□ 0.41
TRIM3-215ENST00000639856 DZIP1Q86YF9 867 aaKnown RBP17.6■□□□□ 0.41
TRIM3-215ENST00000639856 WDR66Q8TBY9 1149 aa17.6■□□□□ 0.41
TRIM3-215ENST00000639856 CLSTN2Q9H4D0 955 aa17.6■□□□□ 0.41
TRIM3-215ENST00000639856 STK32BQ9NY57 414 aa17.6■□□□□ 0.41
TRIM3-215ENST00000639856 ZKSCAN5Q9Y2L8 839 aa17.6■□□□□ 0.41
TRIM3-215ENST00000639856 DUOX1Q9NRD9 1551 aa17.6■□□□□ 0.41
TRIM3-215ENST00000639856 KIAA1551Q9HCM1 1747 aa17.59■□□□□ 0.41
TRIM3-215ENST00000639856 CYP2D7A0A087X1C5 515 aa17.59■□□□□ 0.41
TRIM3-215ENST00000639856 CPLX1O14810 134 aa17.59■□□□□ 0.41
TRIM3-215ENST00000639856 KDM4AO75164 1064 aa17.59■□□□□ 0.41
TRIM3-215ENST00000639856 CEBPZQ03701 1054 aaKnown RBP17.59■□□□□ 0.41
TRIM3-215ENST00000639856 PPARAQ07869 468 aa17.59■□□□□ 0.41
TRIM3-215ENST00000639856 DEFB132Q7Z7B7 95 aa17.59■□□□□ 0.41
TRIM3-215ENST00000639856 USP28Q96RU2 1077 aa17.59■□□□□ 0.41
TRIM3-215ENST00000639856 PDGFDQ9GZP0 370 aaPredicted RBP17.59■□□□□ 0.41
TRIM3-215ENST00000639856 MINDY4BA8MYZ0 360 aa17.59■□□□□ 0.41
TRIM3-215ENST00000639856 LDHBP07195 334 aaKnown RBP17.59■□□□□ 0.41
TRIM3-215ENST00000639856 RRP12Q5JTH9 1297 aaKnown RBP17.59■□□□□ 0.41
TRIM3-215ENST00000639856 MFSD6Q6ZSS7 791 aa17.59■□□□□ 0.41
TRIM3-215ENST00000639856 TMC4Q7Z404 712 aa17.59■□□□□ 0.41
TRIM3-215ENST00000639856 ILDR1Q86SU0 546 aaPredicted RBP17.59■□□□□ 0.41
TRIM3-215ENST00000639856 STAG1Q8WVM7 1258 aa17.59■□□□□ 0.41
TRIM3-215ENST00000639856 TMEM87BQ96K49 555 aa17.59■□□□□ 0.41
TRIM3-215ENST00000639856 ORC3Q9UBD5 711 aaPredicted RBP17.59■□□□□ 0.41
TRIM3-215ENST00000639856 SH2B2O14492 632 aaPredicted RBP17.58■□□□□ 0.4
TRIM3-215ENST00000639856 IL1R1P14778 569 aa17.58■□□□□ 0.4
TRIM3-215ENST00000639856 EVX2Q03828 476 aa17.58■□□□□ 0.4
TRIM3-215ENST00000639856 TYRO3Q06418 890 aa17.58■□□□□ 0.4
TRIM3-215ENST00000639856 DIXDC1Q155Q3 683 aa17.58■□□□□ 0.4
TRIM3-215ENST00000639856 SPTY2D1Q68D10 685 aaPredicted RBP17.58■□□□□ 0.4
TRIM3-215ENST00000639856 C8orf76Q96K31 380 aa17.58■□□□□ 0.4
TRIM3-215ENST00000639856 FTOQ9C0B1 505 aaKnown RBP eCLIP17.58■□□□□ 0.4
TRIM3-215ENST00000639856 ZSWIM5Q9P217 1185 aa17.58■□□□□ 0.4
TRIM3-215ENST00000639856 RIMBP2O15034 1052 aa17.57■□□□□ 0.4
TRIM3-215ENST00000639856 ADCY5O95622 1261 aa17.57■□□□□ 0.4
TRIM3-215ENST00000639856 FBXO18Q8NFZ0 1043 aa17.57■□□□□ 0.4
TRIM3-215ENST00000639856 MASTLQ96GX5 879 aa17.57■□□□□ 0.4
TRIM3-215ENST00000639856 TOMM22Q9NS69 142 aa17.57■□□□□ 0.4
TRIM3-215ENST00000639856 QSER1Q2KHR3 1735 aa17.57■□□□□ 0.4
TRIM3-215ENST00000639856 MYH2Q9UKX2 1941 aa17.57■□□□□ 0.4
TRIM3-215ENST00000639856 ZNF500O60304 480 aaPredicted RBP17.57■□□□□ 0.4
TRIM3-215ENST00000639856 PTMAP06454 111 aaKnown RBP17.57■□□□□ 0.4
TRIM3-215ENST00000639856 CKAP2LQ8IYA6 745 aa17.57■□□□□ 0.4
TRIM3-215ENST00000639856 IGDCC4Q8TDY8 1250 aa17.57■□□□□ 0.4
TRIM3-215ENST00000639856 ZNF622Q969S3 477 aaKnown RBP eCLIP17.57■□□□□ 0.4
TRIM3-215ENST00000639856 MRVI1Q9Y6F6 885 aa17.57■□□□□ 0.4
TRIM3-215ENST00000639856 APOA5Q6Q788 366 aa17.56■□□□□ 0.4
TRIM3-215ENST00000639856 C2CD5Q86YS7 1000 aa17.56■□□□□ 0.4
TRIM3-215ENST00000639856 RGS22Q8NE09 1264 aa17.56■□□□□ 0.4
TRIM3-215ENST00000639856 FAM200AQ8TCP9 573 aa17.56■□□□□ 0.4
TRIM3-215ENST00000639856 CNNM2Q9H8M5 875 aa17.56■□□□□ 0.4
TRIM3-215ENST00000639856 GOLGB1Q14789 3259 aaKnown RBP17.56■□□□□ 0.4
TRIM3-215ENST00000639856 ALDH1B1P30837 517 aa17.56■□□□□ 0.4
TRIM3-215ENST00000639856 CTR9Q6PD62 1173 aa17.56■□□□□ 0.4
TRIM3-215ENST00000639856 ZKSCAN3Q9BRR0 538 aa17.56■□□□□ 0.4
TRIM3-215ENST00000639856 KRT23Q9C075 422 aa17.56■□□□□ 0.4
TRIM3-215ENST00000639856 LY9Q9HBG7 655 aa17.56■□□□□ 0.4
TRIM3-215ENST00000639856 DCP1AQ9NPI6 582 aaPredicted RBP17.56■□□□□ 0.4
TRIM3-215ENST00000639856 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.56■□□□□ 0.4
TRIM3-215ENST00000639856 RXRAP19793 462 aa17.55■□□□□ 0.4
TRIM3-215ENST00000639856 METAP2P50579 478 aaKnown RBP eCLIP17.55■□□□□ 0.4
TRIM3-215ENST00000639856 TMEM67Q5HYA8 995 aa17.55■□□□□ 0.4
TRIM3-215ENST00000639856 SGMS1Q86VZ5 419 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms