RNA–Protein interactions for RNA: ENST00000639561.1

ATRIP-208, Transcript of ATR interacting protein, humanhuman

TSL 2

Gene ATRIP, Length 2,376 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRIP-208ENST00000639561 ATP6V1DQ9Y5K8 247 aa16.34■□□□□ 0.21
ATRIP-208ENST00000639561 H7C1D1 291 aa16.33■□□□□ 0.2
ATRIP-208ENST00000639561 SLC5A1P13866 664 aa16.33■□□□□ 0.2
ATRIP-208ENST00000639561 FGD1P98174 961 aa16.33■□□□□ 0.2
ATRIP-208ENST00000639561 CHST3Q7LGC8 479 aa16.33■□□□□ 0.2
ATRIP-208ENST00000639561 PSMD14O00487 310 aa16.33■□□□□ 0.2
ATRIP-208ENST00000639561 FIBPO43427 364 aa16.33■□□□□ 0.2
ATRIP-208ENST00000639561 APOBRQ0VD83 1088 aa16.33■□□□□ 0.2
ATRIP-208ENST00000639561 SPATA5Q8NB90 893 aa16.33■□□□□ 0.2
ATRIP-208ENST00000639561 CTNNA3Q9UI47 895 aa16.33■□□□□ 0.2
ATRIP-208ENST00000639561 CNTNAP1P78357 1384 aa16.32■□□□□ 0.2
ATRIP-208ENST00000639561 TCRBV5S4A2TA0A5A2 114 aa16.32■□□□□ 0.2
ATRIP-208ENST00000639561 SYCE3A1L190 88 aa16.32■□□□□ 0.2
ATRIP-208ENST00000639561 PDCP20941 246 aa16.32■□□□□ 0.2
ATRIP-208ENST00000639561 DOK7Q18PE1 504 aa16.32■□□□□ 0.2
ATRIP-208ENST00000639561 ZSCAN25Q6NSZ9 544 aa16.32■□□□□ 0.2
ATRIP-208ENST00000639561 FERMT3Q86UX7 667 aa16.32■□□□□ 0.2
ATRIP-208ENST00000639561 CNOT7Q9UIV1 285 aaKnown RBP16.32■□□□□ 0.2
ATRIP-208ENST00000639561 SCN9AQ15858 1988 aa16.32■□□□□ 0.2
ATRIP-208ENST00000639561 ZNF532Q9HCE3 1301 aa16.32■□□□□ 0.2
ATRIP-208ENST00000639561 DOCK2Q92608 1830 aa16.31■□□□□ 0.2
ATRIP-208ENST00000639561 PFKFB2O60825 505 aa16.31■□□□□ 0.2
ATRIP-208ENST00000639561 PDE6AP16499 860 aa16.31■□□□□ 0.2
ATRIP-208ENST00000639561 UBE3CQ15386 1083 aa16.31■□□□□ 0.2
ATRIP-208ENST00000639561 IMMTQ16891 758 aaKnown RBP16.31■□□□□ 0.2
ATRIP-208ENST00000639561 ZC3H15Q8WU90 426 aaKnown RBP16.31■□□□□ 0.2
ATRIP-208ENST00000639561 GPR101Q96P66 508 aaPredicted RBP16.31■□□□□ 0.2
ATRIP-208ENST00000639561 CHRNDQ07001 517 aa16.31■□□□□ 0.2
ATRIP-208ENST00000639561 MKRN1Q9UHC7 482 aaKnown RBP16.31■□□□□ 0.2
ATRIP-208ENST00000639561 BCAMP50895 628 aa16.3■□□□□ 0.2
ATRIP-208ENST00000639561 MICALL2Q8IY33 904 aa16.3■□□□□ 0.2
ATRIP-208ENST00000639561 RTN4Q9NQC3 1192 aaKnown RBP16.3■□□□□ 0.2
ATRIP-208ENST00000639561 MINPP1Q9UNW1 487 aa16.3■□□□□ 0.2
ATRIP-208ENST00000639561 FAM173BQ6P4H8 233 aa16.3■□□□□ 0.2
ATRIP-208ENST00000639561 SMARCC2Q8TAQ2 1214 aa16.3■□□□□ 0.2
ATRIP-208ENST00000639561 ANKRD2Q9GZV1 360 aa16.3■□□□□ 0.2
ATRIP-208ENST00000639561 NBPF3Q9H094 633 aa16.3■□□□□ 0.2
ATRIP-208ENST00000639561 GPHNQ9NQX3 736 aaPredicted RBP16.3■□□□□ 0.2
ATRIP-208ENST00000639561 A0A1B0GUL6 1792 aa16.3■□□□□ 0.2
ATRIP-208ENST00000639561 CTDNEP1O95476 244 aa16.29■□□□□ 0.2
ATRIP-208ENST00000639561 PDIA4P13667 645 aaKnown RBP16.29■□□□□ 0.2
ATRIP-208ENST00000639561 LRSAM1Q6UWE0 723 aa16.29■□□□□ 0.2
ATRIP-208ENST00000639561 DDX11Q96FC9 970 aa16.29■□□□□ 0.2
ATRIP-208ENST00000639561 RBSNQ9H1K0 784 aa16.29■□□□□ 0.2
ATRIP-208ENST00000639561 PGAP2Q9UHJ9 254 aa16.29■□□□□ 0.2
ATRIP-208ENST00000639561 ZBTB12Q9Y330 459 aaPredicted RBP16.29■□□□□ 0.2
ATRIP-208ENST00000639561 NASPP49321 788 aaPredicted RBP16.29■□□□□ 0.2
ATRIP-208ENST00000639561 UBE2HP62256 183 aa16.29■□□□□ 0.2
ATRIP-208ENST00000639561 MB21D2Q8IYB1 491 aaPredicted RBP16.29■□□□□ 0.2
ATRIP-208ENST00000639561 FBXL16Q8N461 479 aa16.29■□□□□ 0.2
ATRIP-208ENST00000639561 NSUN7Q8NE18 718 aaKnown RBP16.29■□□□□ 0.2
ATRIP-208ENST00000639561 NCOA5Q9HCD5 579 aaKnown RBP16.29■□□□□ 0.2
ATRIP-208ENST00000639561 LEMD3Q9Y2U8 911 aa16.29■□□□□ 0.2
ATRIP-208ENST00000639561 VIL1P09327 827 aaKnown RBP16.28■□□□□ 0.2
ATRIP-208ENST00000639561 PODNQ7Z5L7 613 aa16.28■□□□□ 0.2
ATRIP-208ENST00000639561 UBE2Q2Q8WVN8 375 aa16.28■□□□□ 0.2
ATRIP-208ENST00000639561 WTIPA6NIX2 430 aaPredicted RBP16.28■□□□□ 0.2
ATRIP-208ENST00000639561 ZNF213O14771 459 aa16.28■□□□□ 0.2
ATRIP-208ENST00000639561 PDIA3P30101 505 aaKnown RBP16.28■□□□□ 0.2
ATRIP-208ENST00000639561 CCT2P78371 535 aaKnown RBP16.28■□□□□ 0.2
ATRIP-208ENST00000639561 TRPM4Q8TD43 1214 aa16.28■□□□□ 0.2
ATRIP-208ENST00000639561 LLPHQ9BRT6 129 aaKnown RBP16.28■□□□□ 0.2
ATRIP-208ENST00000639561 RASSF10A6NK89 507 aa16.27■□□□□ 0.2
ATRIP-208ENST00000639561 ANTXR2P58335 489 aa16.27■□□□□ 0.2
ATRIP-208ENST00000639561 TPRNQ4KMQ1 711 aa16.27■□□□□ 0.2
ATRIP-208ENST00000639561 MAGEB6Q8N7X4 407 aa16.27■□□□□ 0.2
ATRIP-208ENST00000639561 NKX2-3Q8TAU0 364 aa16.27■□□□□ 0.2
ATRIP-208ENST00000639561 STRBPQ96SI9 672 aaKnown RBP16.27■□□□□ 0.2
ATRIP-208ENST00000639561 DENND2AQ9ULE3 1009 aa16.27■□□□□ 0.2
ATRIP-208ENST00000639561 ABT1Q9ULW3 272 aaKnown RBP16.27■□□□□ 0.2
ATRIP-208ENST00000639561 EVCP57679 992 aa16.27■□□□□ 0.19
ATRIP-208ENST00000639561 TBC1D10CQ8IV04 446 aa16.27■□□□□ 0.19
ATRIP-208ENST00000639561 AGBL3Q8NEM8 1001 aa16.27■□□□□ 0.19
ATRIP-208ENST00000639561 ZNF274Q96GC6 653 aaPredicted RBP16.27■□□□□ 0.19
ATRIP-208ENST00000639561 SALL1Q9NSC2 1324 aa16.26■□□□□ 0.19
ATRIP-208ENST00000639561 PTPDC1A2A3K4 754 aa16.26■□□□□ 0.19
ATRIP-208ENST00000639561 PRC1O43663 620 aa16.26■□□□□ 0.19
ATRIP-208ENST00000639561 HSPA1AP0DMV8 641 aaKnown RBP16.26■□□□□ 0.19
ATRIP-208ENST00000639561 HSPA1BP0DMV9 641 aaKnown RBP16.26■□□□□ 0.19
ATRIP-208ENST00000639561 DEFB115Q30KQ5 88 aa16.26■□□□□ 0.19
ATRIP-208ENST00000639561 RSBN1LQ6PCB5 846 aaPredicted RBP16.26■□□□□ 0.19
ATRIP-208ENST00000639561 KCNQ5Q9NR82 932 aa16.26■□□□□ 0.19
ATRIP-208ENST00000639561 MCM5P33992 734 aa16.26■□□□□ 0.19
ATRIP-208ENST00000639561 HIRAP54198 1017 aaPredicted RBP16.26■□□□□ 0.19
ATRIP-208ENST00000639561 MAP3K12Q12852 859 aa16.26■□□□□ 0.19
ATRIP-208ENST00000639561 TTC6Q86TZ1 520 aa16.26■□□□□ 0.19
ATRIP-208ENST00000639561 NCOA7Q8NI08 942 aa16.26■□□□□ 0.19
ATRIP-208ENST00000639561 SYAP1Q96A49 352 aaPredicted RBP16.26■□□□□ 0.19
ATRIP-208ENST00000639561 AIDAQ96BJ3 306 aa16.26■□□□□ 0.19
ATRIP-208ENST00000639561 NAP1L2Q9ULW6 460 aaPredicted RBP16.26■□□□□ 0.19
ATRIP-208ENST00000639561 SHTN1A0MZ66 631 aa16.25■□□□□ 0.19
ATRIP-208ENST00000639561 USP17L3A6NCW0 530 aa16.25■□□□□ 0.19
ATRIP-208ENST00000639561 USP17L4A6NCW7 530 aa16.25■□□□□ 0.19
ATRIP-208ENST00000639561 TRAF5O00463 557 aa16.25■□□□□ 0.19
ATRIP-208ENST00000639561 PPFIA3O75145 1194 aa16.25■□□□□ 0.19
ATRIP-208ENST00000639561 KRT85P78386 507 aa16.25■□□□□ 0.19
ATRIP-208ENST00000639561 USP17L1Q7RTZ2 530 aa16.25■□□□□ 0.19
ATRIP-208ENST00000639561 COA1Q9GZY4 146 aa16.25■□□□□ 0.19
ATRIP-208ENST00000639561 EPB41L4AQ9HCS5 686 aaPredicted RBP16.25■□□□□ 0.19
ATRIP-208ENST00000639561 ZNF804BA4D1E1 1349 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms