RNA–Protein interactions for RNA: ENST00000638488.1

GFAP-228, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 2,641 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-228ENST00000638488 MAP2K1Q02750 393 aaPredicted RBP13.85□□□□□ -0.19
GFAP-228ENST00000638488 NECTIN1Q15223 517 aa13.85□□□□□ -0.19
GFAP-228ENST00000638488 GBP6Q6ZN66 633 aa13.85□□□□□ -0.19
GFAP-228ENST00000638488 CEP112Q8N8E3 955 aa13.85□□□□□ -0.19
GFAP-228ENST00000638488 GOLPH3LQ9H4A5 285 aa13.85□□□□□ -0.19
GFAP-228ENST00000638488 EXOC5O00471 708 aa13.85□□□□□ -0.19
GFAP-228ENST00000638488 HSP90B1P14625 803 aaKnown RBP13.85□□□□□ -0.19
GFAP-228ENST00000638488 TIMM10P62072 90 aa13.85□□□□□ -0.19
GFAP-228ENST00000638488 C11orf91Q3C1V1 193 aa13.85□□□□□ -0.19
GFAP-228ENST00000638488 DDX46Q7L014 1031 aaKnown RBP13.85□□□□□ -0.19
GFAP-228ENST00000638488 ZNF589Q86UQ0 364 aaPredicted RBP13.85□□□□□ -0.19
GFAP-228ENST00000638488 GIMAP7Q8NHV1 300 aa13.85□□□□□ -0.19
GFAP-228ENST00000638488 AFAP1L1Q8TED9 768 aa13.85□□□□□ -0.19
GFAP-228ENST00000638488 VIPAS39Q9H9C1 493 aa13.85□□□□□ -0.19
GFAP-228ENST00000638488 HIP1O00291 1037 aa13.84□□□□□ -0.19
GFAP-228ENST00000638488 AARSP49588 968 aaKnown RBP eCLIP13.84□□□□□ -0.19
GFAP-228ENST00000638488 CASP8Q14790 479 aa13.84□□□□□ -0.19
GFAP-228ENST00000638488 MAP9Q49MG5 647 aa13.84□□□□□ -0.19
GFAP-228ENST00000638488 LRRC24Q50LG9 513 aa13.84□□□□□ -0.19
GFAP-228ENST00000638488 JMYQ8N9B5 988 aa13.84□□□□□ -0.19
GFAP-228ENST00000638488 DHX58Q96C10 678 aa13.84□□□□□ -0.19
GFAP-228ENST00000638488 TCEANC2Q96MN5 208 aa13.84□□□□□ -0.19
GFAP-228ENST00000638488 ATXN2Q99700 1313 aaKnown RBP13.84□□□□□ -0.19
GFAP-228ENST00000638488 IKBKBO14920 756 aa13.84□□□□□ -0.19
GFAP-228ENST00000638488 CUTAO60888 179 aa13.84□□□□□ -0.19
GFAP-228ENST00000638488 SHOX2O60902 331 aaPredicted RBP13.84□□□□□ -0.19
GFAP-228ENST00000638488 ERCC3P19447 782 aa13.84□□□□□ -0.19
GFAP-228ENST00000638488 NEDD9Q14511 834 aa13.84□□□□□ -0.19
GFAP-228ENST00000638488 CREB3L3Q68CJ9 461 aa13.84□□□□□ -0.19
GFAP-228ENST00000638488 PRPF38AQ8NAV1 312 aaKnown RBP13.84□□□□□ -0.19
GFAP-228ENST00000638488 CTCFLQ8NI51 663 aaPredicted RBP13.84□□□□□ -0.19
GFAP-228ENST00000638488 ERCC4Q92889 916 aaPredicted RBP13.84□□□□□ -0.19
GFAP-228ENST00000638488 CCDC102AQ96A19 550 aa13.84□□□□□ -0.19
GFAP-228ENST00000638488 FANCCQ00597 558 aa13.83□□□□□ -0.19
GFAP-228ENST00000638488 COL9A3Q14050 684 aaPredicted RBP13.83□□□□□ -0.19
GFAP-228ENST00000638488 CCDC129Q6ZRS4 1044 aa13.83□□□□□ -0.19
GFAP-228ENST00000638488 FAM212AQ96EL1 285 aa13.83□□□□□ -0.19
GFAP-228ENST00000638488 ABCB6Q9NP58 842 aa13.83□□□□□ -0.19
GFAP-228ENST00000638488 GPTP24298 496 aa13.83□□□□□ -0.2
GFAP-228ENST00000638488 LIG3P49916 1009 aa13.83□□□□□ -0.2
GFAP-228ENST00000638488 TMEM139Q8IV31 216 aa13.83□□□□□ -0.2
GFAP-228ENST00000638488 MIEF2Q96C03 454 aa13.83□□□□□ -0.2
GFAP-228ENST00000638488 FAM89AQ96GI7 184 aa13.83□□□□□ -0.2
GFAP-228ENST00000638488 SGSM3Q96HU1 749 aa13.83□□□□□ -0.2
GFAP-228ENST00000638488 SEC62Q99442 399 aaKnown RBP13.83□□□□□ -0.2
GFAP-228ENST00000638488 PUS3Q9BZE2 481 aaKnown RBP13.83□□□□□ -0.2
GFAP-228ENST00000638488 SHANK3Q9BYB0 1731 aa13.83□□□□□ -0.2
GFAP-228ENST00000638488 MYO1BO43795 1136 aa13.82□□□□□ -0.2
GFAP-228ENST00000638488 ADAMTS2O95450 1211 aa13.82□□□□□ -0.2
GFAP-228ENST00000638488 ATP5JP18859 108 aa13.82□□□□□ -0.2
GFAP-228ENST00000638488 ADD1P35611 737 aaKnown RBP13.82□□□□□ -0.2
GFAP-228ENST00000638488 PPP2R5AQ15172 486 aa13.82□□□□□ -0.2
GFAP-228ENST00000638488 KIF6Q6ZMV9 814 aa13.82□□□□□ -0.2
GFAP-228ENST00000638488 TAF6LQ9Y6J9 622 aa13.82□□□□□ -0.2
GFAP-228ENST00000638488 TMCO5BA8MYB1 307 aa13.82□□□□□ -0.2
GFAP-228ENST00000638488 EBAG9O00559 213 aa13.82□□□□□ -0.2
GFAP-228ENST00000638488 SLC27A2O14975 620 aa13.82□□□□□ -0.2
GFAP-228ENST00000638488 ELF1P32519 619 aa13.82□□□□□ -0.2
GFAP-228ENST00000638488 NCAPHQ15003 741 aa13.82□□□□□ -0.2
GFAP-228ENST00000638488 CABS1Q96KC9 395 aa13.82□□□□□ -0.2
GFAP-228ENST00000638488 FAM169AQ9Y6X4 670 aa13.82□□□□□ -0.2
GFAP-228ENST00000638488 DPCR1Q3MIW9 517 aa13.81□□□□□ -0.2
GFAP-228ENST00000638488 ATG9AQ7Z3C6 839 aa13.81□□□□□ -0.2
GFAP-228ENST00000638488 MAP4K1Q92918 833 aa13.81□□□□□ -0.2
GFAP-228ENST00000638488 BRF1Q92994 677 aa13.81□□□□□ -0.2
GFAP-228ENST00000638488 PNKPQ96T60 521 aa13.81□□□□□ -0.2
GFAP-228ENST00000638488 KIAA1468Q9P260 1216 aa13.81□□□□□ -0.2
GFAP-228ENST00000638488 TAOK2Q9UL54 1235 aa13.81□□□□□ -0.2
GFAP-228ENST00000638488 UBR2Q8IWV8 1755 aa13.81□□□□□ -0.2
GFAP-228ENST00000638488 TOGARAM1Q9Y4F4 1720 aa13.81□□□□□ -0.2
GFAP-228ENST00000638488 A0A087WWV3 80 aa13.81□□□□□ -0.2
GFAP-228ENST00000638488 H3BQV1 296 aa13.81□□□□□ -0.2
GFAP-228ENST00000638488 RNF40O75150 1001 aa13.81□□□□□ -0.2
GFAP-228ENST00000638488 PRPF6O94906 941 aaKnown RBP13.81□□□□□ -0.2
GFAP-228ENST00000638488 IFFO2Q5TF58 517 aa13.81□□□□□ -0.2
GFAP-228ENST00000638488 VSTM4Q8IW00 320 aa13.81□□□□□ -0.2
GFAP-228ENST00000638488 FMR1NBQ8N0W7 255 aaPredicted RBP13.81□□□□□ -0.2
GFAP-228ENST00000638488 SYNE4Q8N205 404 aa13.81□□□□□ -0.2
GFAP-228ENST00000638488 FSIP1Q8NA03 581 aa13.81□□□□□ -0.2
GFAP-228ENST00000638488 RNF217Q8TC41 542 aa13.81□□□□□ -0.2
GFAP-228ENST00000638488 MCM8Q9UJA3 840 aa13.81□□□□□ -0.2
GFAP-228ENST00000638488 STX10O60499 249 aa13.8□□□□□ -0.2
GFAP-228ENST00000638488 WDHD1O75717 1129 aaPredicted RBP13.8□□□□□ -0.2
GFAP-228ENST00000638488 STARD3NLO95772 234 aa13.8□□□□□ -0.2
GFAP-228ENST00000638488 NLRP12P59046 1061 aa13.8□□□□□ -0.2
GFAP-228ENST00000638488 CCDC57Q2TAC2 916 aa13.8□□□□□ -0.2
GFAP-228ENST00000638488 FBXW10Q5XX13 1052 aa13.8□□□□□ -0.2
GFAP-228ENST00000638488 BLOC1S2Q6QNY1 142 aa13.8□□□□□ -0.2
GFAP-228ENST00000638488 FAM177A1Q8N128 213 aaPredicted RBP13.8□□□□□ -0.2
GFAP-228ENST00000638488 CDC23Q9UJX2 597 aa13.8□□□□□ -0.2
GFAP-228ENST00000638488 NHSL1Q5SYE7 1610 aa13.8□□□□□ -0.2
GFAP-228ENST00000638488 RPS6KB1P23443 525 aa13.8□□□□□ -0.2
GFAP-228ENST00000638488 INPP5BP32019 993 aa13.8□□□□□ -0.2
GFAP-228ENST00000638488 IRX1P78414 480 aaPredicted RBP13.8□□□□□ -0.2
GFAP-228ENST00000638488 SCRN1Q12765 414 aa13.8□□□□□ -0.2
GFAP-228ENST00000638488 TCIRG1Q13488 830 aa13.8□□□□□ -0.2
GFAP-228ENST00000638488 NAA16Q6N069 864 aaPredicted RBP13.8□□□□□ -0.2
GFAP-228ENST00000638488 CCDC12Q8WUD4 166 aaPredicted RBP13.8□□□□□ -0.2
GFAP-228ENST00000638488 ZNF396Q96N95 335 aaPredicted RBP13.8□□□□□ -0.2
GFAP-228ENST00000638488 PLEKHA4Q9H4M7 779 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms