RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 ADGRA2Q96PE1 1338 aa9.69□□□□□ -0.86
PNKP-229ENST00000637897 GPR108Q9NPR9 543 aa9.69□□□□□ -0.86
PNKP-229ENST00000637897 SNRKQ9NRH2 765 aa9.69□□□□□ -0.86
PNKP-229ENST00000637897 GNL3LQ9NVN8 582 aaKnown RBP9.69□□□□□ -0.86
PNKP-229ENST00000637897 ABCF2Q9UG63 623 aa9.69□□□□□ -0.86
PNKP-229ENST00000637897 KCNH4Q9UQ05 1017 aa9.69□□□□□ -0.86
PNKP-229ENST00000637897 HDAC5Q9UQL6 1122 aa9.69□□□□□ -0.86
PNKP-229ENST00000637897 AKAP2Q9Y2D5 859 aa9.69□□□□□ -0.86
PNKP-229ENST00000637897 FAM196BA6NMK8 535 aa9.68□□□□□ -0.86
PNKP-229ENST00000637897 ALDH1A1P00352 501 aa9.68□□□□□ -0.86
PNKP-229ENST00000637897 JAG1P78504 1218 aa9.68□□□□□ -0.86
PNKP-229ENST00000637897 G3BP1Q13283 466 aaKnown RBP eCLIP9.68□□□□□ -0.86
PNKP-229ENST00000637897 PPIL2Q13356 520 aa9.68□□□□□ -0.86
PNKP-229ENST00000637897 MVPQ14764 893 aaKnown RBP9.68□□□□□ -0.86
PNKP-229ENST00000637897 NOL9Q5SY16 702 aaKnown RBP9.68□□□□□ -0.86
PNKP-229ENST00000637897 C20orf194Q5TEA3 1177 aa9.68□□□□□ -0.86
PNKP-229ENST00000637897 GPAT2Q6NUI2 795 aa9.68□□□□□ -0.86
PNKP-229ENST00000637897 ERO1BQ86YB8 467 aa9.68□□□□□ -0.86
PNKP-229ENST00000637897 ITPRIPQ8IWB1 547 aa9.68□□□□□ -0.86
PNKP-229ENST00000637897 ZNF341Q9BYN7 854 aa9.68□□□□□ -0.86
PNKP-229ENST00000637897 ARHGAP39Q9C0H5 1083 aa9.68□□□□□ -0.86
PNKP-229ENST00000637897 PIH1D3Q9NQM4 214 aaKnown RBP9.68□□□□□ -0.86
PNKP-229ENST00000637897 NDUFB9Q9Y6M9 179 aa9.68□□□□□ -0.86
PNKP-229ENST00000637897 PDE4DIPQ5VU43 2346 aa9.68□□□□□ -0.86
PNKP-229ENST00000637897 PTPRFP10586 1907 aa9.68□□□□□ -0.86
PNKP-229ENST00000637897 CDK5RAP2Q96SN8 1893 aa9.68□□□□□ -0.86
PNKP-229ENST00000637897 DOCK2Q92608 1830 aa9.68□□□□□ -0.86
PNKP-229ENST00000637897 AK9Q5TCS8 1911 aa9.67□□□□□ -0.86
PNKP-229ENST00000637897 ENTPD3O75355 529 aa9.67□□□□□ -0.86
PNKP-229ENST00000637897 SURF6O75683 361 aaKnown RBP9.67□□□□□ -0.86
PNKP-229ENST00000637897 ZAP70P43403 619 aa9.67□□□□□ -0.86
PNKP-229ENST00000637897 SHROOM1Q2M3G4 852 aaPredicted RBP9.67□□□□□ -0.86
PNKP-229ENST00000637897 FBXO46Q6PJ61 603 aaPredicted RBP9.67□□□□□ -0.86
PNKP-229ENST00000637897 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.67□□□□□ -0.86
PNKP-229ENST00000637897 CCDC8Q9H0W5 538 aaPredicted RBP9.67□□□□□ -0.86
PNKP-229ENST00000637897 ANTXR1Q9H6X2 564 aa9.67□□□□□ -0.86
PNKP-229ENST00000637897 TMOD2Q9NZR1 351 aa9.67□□□□□ -0.86
PNKP-229ENST00000637897 GTF2A2P52657 109 aa9.66□□□□□ -0.86
PNKP-229ENST00000637897 PPATQ06203 517 aa9.66□□□□□ -0.86
PNKP-229ENST00000637897 PKN2Q16513 984 aaKnown RBP9.66□□□□□ -0.86
PNKP-229ENST00000637897 C17orf99Q6UX52 265 aa9.66□□□□□ -0.86
PNKP-229ENST00000637897 ERICH6Q7L0X2 663 aa9.66□□□□□ -0.86
PNKP-229ENST00000637897 SH3RF3Q8TEJ3 882 aaPredicted RBP9.66□□□□□ -0.86
PNKP-229ENST00000637897 ZNF512BQ96KM6 892 aaPredicted RBP9.66□□□□□ -0.86
PNKP-229ENST00000637897 DNAJC18Q9H819 358 aa9.66□□□□□ -0.86
PNKP-229ENST00000637897 ZBTB40Q9NUA8 1239 aa9.66□□□□□ -0.86
PNKP-229ENST00000637897 EXOC6BQ9Y2D4 811 aa9.66□□□□□ -0.86
PNKP-229ENST00000637897 PTPN22Q9Y2R2 807 aa9.66□□□□□ -0.86
PNKP-229ENST00000637897 TRIM17Q9Y577 477 aa9.66□□□□□ -0.86
PNKP-229ENST00000637897 CSADQ9Y600 493 aa9.66□□□□□ -0.86
PNKP-229ENST00000637897 POTEFA5A3E0 1075 aa9.65□□□□□ -0.86
PNKP-229ENST00000637897 TLR2O60603 784 aa9.65□□□□□ -0.86
PNKP-229ENST00000637897 NPM3O75607 178 aaKnown RBP9.65□□□□□ -0.86
PNKP-229ENST00000637897 PTPRAP18433 802 aa9.65□□□□□ -0.86
PNKP-229ENST00000637897 PPP4CP60510 307 aa9.65□□□□□ -0.86
PNKP-229ENST00000637897 SP3Q02447 781 aa9.65□□□□□ -0.86
PNKP-229ENST00000637897 PICALMQ13492 652 aa9.65□□□□□ -0.86
PNKP-229ENST00000637897 TAF1CQ15572 869 aaPredicted RBP9.65□□□□□ -0.86
PNKP-229ENST00000637897 DCAF15Q66K64 600 aa9.65□□□□□ -0.86
PNKP-229ENST00000637897 DZIP1Q86YF9 867 aaKnown RBP9.65□□□□□ -0.86
PNKP-229ENST00000637897 FTSJ3Q8IY81 847 aaKnown RBP9.65□□□□□ -0.86
PNKP-229ENST00000637897 ZGPATQ8N5A5 531 aaKnown RBP9.65□□□□□ -0.86
PNKP-229ENST00000637897 OSBPL5Q9H0X9 879 aaPredicted RBP9.65□□□□□ -0.86
PNKP-229ENST00000637897 COG6Q9Y2V7 657 aa9.65□□□□□ -0.86
PNKP-229ENST00000637897 AFG3L2Q9Y4W6 797 aa9.65□□□□□ -0.86
PNKP-229ENST00000637897 FOCADQ5VW36 1801 aa9.64□□□□□ -0.87
PNKP-229ENST00000637897 TBC1D12O60347 775 aa9.64□□□□□ -0.87
PNKP-229ENST00000637897 CHGBP05060 677 aa9.64□□□□□ -0.87
PNKP-229ENST00000637897 DYNLL1P63167 89 aaKnown RBP9.64□□□□□ -0.87
PNKP-229ENST00000637897 EVX2Q03828 476 aa9.64□□□□□ -0.87
PNKP-229ENST00000637897 SNAPC2Q13487 334 aa9.64□□□□□ -0.87
PNKP-229ENST00000637897 SCYL3Q8IZE3 742 aa9.64□□□□□ -0.87
PNKP-229ENST00000637897 MAST2Q6P0Q8 1798 aa9.64□□□□□ -0.87
PNKP-229ENST00000637897 COL2A1P02458 1487 aaPredicted RBP9.64□□□□□ -0.87
PNKP-229ENST00000637897 DOCK1Q14185 1865 aa9.64□□□□□ -0.87
PNKP-229ENST00000637897 DOCK3Q8IZD9 2030 aa9.63□□□□□ -0.87
PNKP-229ENST00000637897 A0A0G2JLL6 359 aaPredicted RBP9.63□□□□□ -0.87
PNKP-229ENST00000637897 UQCRFS1P1P0C7P4 283 aa9.63□□□□□ -0.87
PNKP-229ENST00000637897 CYP2C8P10632 490 aa9.63□□□□□ -0.87
PNKP-229ENST00000637897 BCRP11274 1271 aa9.63□□□□□ -0.87
PNKP-229ENST00000637897 CETPP11597 493 aa9.63□□□□□ -0.87
PNKP-229ENST00000637897 SLFNL1Q499Z3 407 aa9.63□□□□□ -0.87
PNKP-229ENST00000637897 SPTY2D1Q68D10 685 aaPredicted RBP9.63□□□□□ -0.87
PNKP-229ENST00000637897 POTEEQ6S8J3 1075 aa9.63□□□□□ -0.87
PNKP-229ENST00000637897 PRRT2Q7Z6L0 340 aaPredicted RBP9.63□□□□□ -0.87
PNKP-229ENST00000637897 ANKRD23Q86SG2 305 aa9.63□□□□□ -0.87
PNKP-229ENST00000637897 METTL16Q86W50 562 aaKnown RBP9.63□□□□□ -0.87
PNKP-229ENST00000637897 ARMC5Q96C12 935 aa9.63□□□□□ -0.87
PNKP-229ENST00000637897 ZFYVE28Q9HCC9 887 aa9.63□□□□□ -0.87
PNKP-229ENST00000637897 IL1RAPL2Q9NP60 686 aa9.63□□□□□ -0.87
PNKP-229ENST00000637897 ZCCHC17Q9NP64 241 aaKnown RBP9.63□□□□□ -0.87
PNKP-229ENST00000637897 AATFQ9NY61 560 aaKnown RBP eCLIP9.63□□□□□ -0.87
PNKP-229ENST00000637897 RAI14Q9P0K7 980 aa9.63□□□□□ -0.87
PNKP-229ENST00000637897 CPA4Q9UI42 421 aa9.63□□□□□ -0.87
PNKP-229ENST00000637897 PTCH2Q9Y6C5 1203 aa9.63□□□□□ -0.87
PNKP-229ENST00000637897 ZHX2Q9Y6X8 837 aa9.63□□□□□ -0.87
PNKP-229ENST00000637897 PDHXO00330 501 aa9.62□□□□□ -0.87
PNKP-229ENST00000637897 CXCL11O14625 94 aa9.62□□□□□ -0.87
PNKP-229ENST00000637897 CTNND1O60716 968 aaKnown RBP9.62□□□□□ -0.87
PNKP-229ENST00000637897 ECM2O94769 699 aaPredicted RBP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms