RNA–Protein interactions for RNA: ENST00000637117.1

CACNA1A-236, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,124 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-236ENST00000637117 ZNF333Q96JL9 665 aa11.68□□□□□ -0.54
CACNA1A-236ENST00000637117 ARID3AQ99856 593 aa11.68□□□□□ -0.54
CACNA1A-236ENST00000637117 PNMA3Q9UL41 463 aa11.68□□□□□ -0.54
CACNA1A-236ENST00000637117 PLIN1O60240 522 aa11.67□□□□□ -0.54
CACNA1A-236ENST00000637117 SLC4A8Q2Y0W8 1093 aa11.67□□□□□ -0.54
CACNA1A-236ENST00000637117 LINS1Q8NG48 757 aa11.67□□□□□ -0.54
CACNA1A-236ENST00000637117 DNAAF4Q8WXU2 420 aa11.67□□□□□ -0.54
CACNA1A-236ENST00000637117 TATDN2Q93075 761 aa11.67□□□□□ -0.54
CACNA1A-236ENST00000637117 ZFYVE28Q9HCC9 887 aa11.67□□□□□ -0.54
CACNA1A-236ENST00000637117 ZNF70Q9UC06 446 aaPredicted RBP11.67□□□□□ -0.54
CACNA1A-236ENST00000637117 LIMD1Q9UGP4 676 aa11.67□□□□□ -0.54
CACNA1A-236ENST00000637117 CHMP3Q9Y3E7 222 aa11.67□□□□□ -0.54
CACNA1A-236ENST00000637117 CENPFP49454 3210 aa11.67□□□□□ -0.54
CACNA1A-236ENST00000637117 HTTP42858 3142 aa11.66□□□□□ -0.54
CACNA1A-236ENST00000637117 DDX11L8A8MPP1 907 aa11.66□□□□□ -0.54
CACNA1A-236ENST00000637117 APBB1O00213 710 aa11.66□□□□□ -0.54
CACNA1A-236ENST00000637117 GTF2A2P52657 109 aa11.66□□□□□ -0.54
CACNA1A-236ENST00000637117 FOXO4P98177 505 aa11.66□□□□□ -0.54
CACNA1A-236ENST00000637117 FKBP5Q13451 457 aaPredicted RBP11.66□□□□□ -0.54
CACNA1A-236ENST00000637117 TNFAIP1Q13829 316 aa11.66□□□□□ -0.54
CACNA1A-236ENST00000637117 TAF1CQ15572 869 aaPredicted RBP11.66□□□□□ -0.54
CACNA1A-236ENST00000637117 SLC9C1Q4G0N8 1177 aa11.66□□□□□ -0.54
CACNA1A-236ENST00000637117 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.66□□□□□ -0.54
CACNA1A-236ENST00000637117 PACS2Q86VP3 889 aa11.66□□□□□ -0.54
CACNA1A-236ENST00000637117 SPIRE2Q8WWL2 714 aa11.66□□□□□ -0.54
CACNA1A-236ENST00000637117 BRI3BPQ8WY22 251 aa11.66□□□□□ -0.54
CACNA1A-236ENST00000637117 KCNK17Q96T54 332 aa11.66□□□□□ -0.54
CACNA1A-236ENST00000637117 TDRD3Q9H7E2 651 aaKnown RBP11.66□□□□□ -0.54
CACNA1A-236ENST00000637117 PRKRIP1Q9H875 184 aaPredicted RBP11.66□□□□□ -0.54
CACNA1A-236ENST00000637117 PTCH2Q9Y6C5 1203 aa11.66□□□□□ -0.54
CACNA1A-236ENST00000637117 FAM205AQ6ZU69 1335 aa11.65□□□□□ -0.54
CACNA1A-236ENST00000637117 RBBP6Q7Z6E9 1792 aaKnown RBP11.65□□□□□ -0.54
CACNA1A-236ENST00000637117 CCL15-CCL14A0A0B4J2E2 113 aa11.65□□□□□ -0.54
CACNA1A-236ENST00000637117 CCL15Q16663 113 aa11.65□□□□□ -0.54
CACNA1A-236ENST00000637117 LDHAL6AQ6ZMR3 332 aa11.65□□□□□ -0.54
CACNA1A-236ENST00000637117 TEPSINQ96N21 525 aa11.65□□□□□ -0.54
CACNA1A-236ENST00000637117 TMEM134Q9H6X4 195 aa11.65□□□□□ -0.54
CACNA1A-236ENST00000637117 SERPINA10Q9UK55 444 aa11.65□□□□□ -0.54
CACNA1A-236ENST00000637117 TTF2Q9UNY4 1162 aaKnown RBP11.65□□□□□ -0.54
CACNA1A-236ENST00000637117 ECM29Q5VYK3 1845 aa11.65□□□□□ -0.55
CACNA1A-236ENST00000637117 LAMB1P07942 1786 aa11.64□□□□□ -0.55
CACNA1A-236ENST00000637117 BRCA2P51587 3418 aa11.64□□□□□ -0.55
CACNA1A-236ENST00000637117 TCP10L2B9ZVM9 353 aa11.64□□□□□ -0.55
CACNA1A-236ENST00000637117 MYCP01106 439 aaPredicted RBP11.64□□□□□ -0.55
CACNA1A-236ENST00000637117 RFC5P40937 340 aa11.64□□□□□ -0.55
CACNA1A-236ENST00000637117 VGLL4Q14135 290 aa11.64□□□□□ -0.55
CACNA1A-236ENST00000637117 CCDC57Q2TAC2 916 aa11.64□□□□□ -0.55
CACNA1A-236ENST00000637117 PROX2Q3B8N5 592 aa11.64□□□□□ -0.55
CACNA1A-236ENST00000637117 MFSD14BQ5SR56 506 aa11.64□□□□□ -0.55
CACNA1A-236ENST00000637117 LMBR1LQ6UX01 489 aa11.64□□□□□ -0.55
CACNA1A-236ENST00000637117 CDAN1Q8IWY9 1227 aa11.64□□□□□ -0.55
CACNA1A-236ENST00000637117 DZIP1LQ8IYY4 767 aaKnown RBP11.64□□□□□ -0.55
CACNA1A-236ENST00000637117 FAM43AQ8N2R8 423 aa11.64□□□□□ -0.55
CACNA1A-236ENST00000637117 TDRD7Q8NHU6 1098 aaKnown RBP11.64□□□□□ -0.55
CACNA1A-236ENST00000637117 ZNF594Q96JF6 807 aaPredicted RBP11.64□□□□□ -0.55
CACNA1A-236ENST00000637117 CNNM1Q9NRU3 951 aa11.64□□□□□ -0.55
CACNA1A-236ENST00000637117 CSADQ9Y600 493 aa11.64□□□□□ -0.55
CACNA1A-236ENST00000637117 TRAK2O60296 914 aa11.63□□□□□ -0.55
CACNA1A-236ENST00000637117 WDHD1O75717 1129 aaPredicted RBP11.63□□□□□ -0.55
CACNA1A-236ENST00000637117 HIBADHP31937 336 aaKnown RBP11.63□□□□□ -0.55
CACNA1A-236ENST00000637117 TNNI2P48788 182 aa11.63□□□□□ -0.55
CACNA1A-236ENST00000637117 CCDC27Q2M243 656 aa11.63□□□□□ -0.55
CACNA1A-236ENST00000637117 TAF7LQ5H9L4 462 aa11.63□□□□□ -0.55
CACNA1A-236ENST00000637117 WWC1Q8IX03 1113 aa11.63□□□□□ -0.55
CACNA1A-236ENST00000637117 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.63□□□□□ -0.55
CACNA1A-236ENST00000637117 OTUD5Q96G74 571 aa11.63□□□□□ -0.55
CACNA1A-236ENST00000637117 TMEM39BQ9GZU3 492 aa11.63□□□□□ -0.55
CACNA1A-236ENST00000637117 SPDYE5A6NIY4 337 aa11.62□□□□□ -0.55
CACNA1A-236ENST00000637117 H0YGN5 161 aa11.62□□□□□ -0.55
CACNA1A-236ENST00000637117 SMAPO00193 183 aa11.62□□□□□ -0.55
CACNA1A-236ENST00000637117 TLR2O60603 784 aa11.62□□□□□ -0.55
CACNA1A-236ENST00000637117 CRKP46108 304 aa11.62□□□□□ -0.55
CACNA1A-236ENST00000637117 GYG1P46976 350 aa11.62□□□□□ -0.55
CACNA1A-236ENST00000637117 UBE4AQ14139 1066 aa11.62□□□□□ -0.55
CACNA1A-236ENST00000637117 KIF22Q14807 665 aa11.62□□□□□ -0.55
CACNA1A-236ENST00000637117 EPHA10Q5JZY3 1008 aa11.62□□□□□ -0.55
CACNA1A-236ENST00000637117 SH3TC2Q8TF17 1288 aa11.62□□□□□ -0.55
CACNA1A-236ENST00000637117 FAM84BQ96KN1 310 aaPredicted RBP11.62□□□□□ -0.55
CACNA1A-236ENST00000637117 ARHGAP39Q9C0H5 1083 aa11.62□□□□□ -0.55
CACNA1A-236ENST00000637117 F6X3S4 739 aa11.61□□□□□ -0.55
CACNA1A-236ENST00000637117 VAMP4O75379 141 aa11.61□□□□□ -0.55
CACNA1A-236ENST00000637117 CETPP11597 493 aa11.61□□□□□ -0.55
CACNA1A-236ENST00000637117 LACTBP83111 547 aaPredicted RBP11.61□□□□□ -0.55
CACNA1A-236ENST00000637117 BEND3Q5T5X7 828 aa11.61□□□□□ -0.55
CACNA1A-236ENST00000637117 POM121Q96HA1 1249 aa11.61□□□□□ -0.55
CACNA1A-236ENST00000637117 BTBD19C9JJ37 291 aa11.6□□□□□ -0.55
CACNA1A-236ENST00000637117 RAD21O60216 631 aa11.6□□□□□ -0.55
CACNA1A-236ENST00000637117 GNRH1P01148 92 aa11.6□□□□□ -0.55
CACNA1A-236ENST00000637117 PRMT2P55345 433 aa11.6□□□□□ -0.55
CACNA1A-236ENST00000637117 PPP2R2DQ66LE6 453 aa11.6□□□□□ -0.55
CACNA1A-236ENST00000637117 ERO1BQ86YB8 467 aa11.6□□□□□ -0.55
CACNA1A-236ENST00000637117 RDH13Q8NBN7 331 aa11.6□□□□□ -0.55
CACNA1A-236ENST00000637117 DPF3Q92784 378 aa11.6□□□□□ -0.55
CACNA1A-236ENST00000637117 ZCCHC17Q9NP64 241 aaKnown RBP11.6□□□□□ -0.55
CACNA1A-236ENST00000637117 CEP290O15078 2479 aa11.6□□□□□ -0.55
CACNA1A-236ENST00000637117 IL16Q14005 1332 aa11.6□□□□□ -0.55
CACNA1A-236ENST00000637117 TRIOBPQ9H2D6 2365 aa11.59□□□□□ -0.55
CACNA1A-236ENST00000637117 GRM8O00222 908 aa11.59□□□□□ -0.55
CACNA1A-236ENST00000637117 SPTLC1O15269 473 aa11.59□□□□□ -0.55
CACNA1A-236ENST00000637117 CACNB3P54284 484 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms