RNA–Protein interactions for RNA: ENST00000636571.1

CTSD-207, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,790 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-207ENST00000636571 SULF1Q8IWU6 871 aa18.63■□□□□ 0.57
CTSD-207ENST00000636571 HELLSQ9NRZ9 838 aa18.63■□□□□ 0.57
CTSD-207ENST00000636571 SAP30BPQ9UHR5 308 aaKnown RBP18.63■□□□□ 0.57
CTSD-207ENST00000636571 PLCG2P16885 1265 aa18.63■□□□□ 0.57
CTSD-207ENST00000636571 SH3BP5LQ7L8J4 393 aa18.63■□□□□ 0.57
CTSD-207ENST00000636571 BACH2Q9BYV9 841 aa18.63■□□□□ 0.57
CTSD-207ENST00000636571 SLC4A4Q9Y6R1 1079 aa18.63■□□□□ 0.57
CTSD-207ENST00000636571 DDX60LQ5H9U9 1706 aaKnown RBP18.62■□□□□ 0.57
CTSD-207ENST00000636571 SMIM22K7EJ46 135 aa18.62■□□□□ 0.57
CTSD-207ENST00000636571 TOMM70O94826 608 aa18.62■□□□□ 0.57
CTSD-207ENST00000636571 USP5P45974 858 aa18.62■□□□□ 0.57
CTSD-207ENST00000636571 CDC37L1Q7L3B6 337 aa18.62■□□□□ 0.57
CTSD-207ENST00000636571 CRNKL1Q9BZJ0 848 aaKnown RBP18.62■□□□□ 0.57
CTSD-207ENST00000636571 FZD1Q9UP38 647 aa18.62■□□□□ 0.57
CTSD-207ENST00000636571 DDTLA6NHG4 134 aaPredicted RBP18.61■□□□□ 0.57
CTSD-207ENST00000636571 HIP1O00291 1037 aa18.61■□□□□ 0.57
CTSD-207ENST00000636571 SEC24BO95487 1268 aa18.61■□□□□ 0.57
CTSD-207ENST00000636571 ITGBL1O95965 494 aaPredicted RBP18.61■□□□□ 0.57
CTSD-207ENST00000636571 TEPSINQ96N21 525 aa18.61■□□□□ 0.57
CTSD-207ENST00000636571 OSBPL5Q9H0X9 879 aaPredicted RBP18.61■□□□□ 0.57
CTSD-207ENST00000636571 EPB41L4AQ9HCS5 686 aaPredicted RBP18.61■□□□□ 0.57
CTSD-207ENST00000636571 MKRN1Q9UHC7 482 aaKnown RBP18.61■□□□□ 0.57
CTSD-207ENST00000636571 SIPA1L1O43166 1804 aa18.61■□□□□ 0.57
CTSD-207ENST00000636571 CCDC171Q6TFL3 1326 aa18.61■□□□□ 0.57
CTSD-207ENST00000636571 GSG1L2A8MUP6 293 aa18.6■□□□□ 0.57
CTSD-207ENST00000636571 NBPF12Q5TAG4 269 aaPredicted RBP18.6■□□□□ 0.57
CTSD-207ENST00000636571 DCP1AQ9NPI6 582 aaPredicted RBP18.6■□□□□ 0.57
CTSD-207ENST00000636571 PALD1Q9ULE6 856 aa18.6■□□□□ 0.57
CTSD-207ENST00000636571 SSC5DA1L4H1 1573 aa18.6■□□□□ 0.57
CTSD-207ENST00000636571 FKBP1CQ5VVH2 108 aa18.6■□□□□ 0.57
CTSD-207ENST00000636571 FAM83AQ86UY5 434 aa18.6■□□□□ 0.57
CTSD-207ENST00000636571 TICAM2Q86XR7 235 aa18.6■□□□□ 0.57
CTSD-207ENST00000636571 SMC1BQ8NDV3 1235 aa18.6■□□□□ 0.57
CTSD-207ENST00000636571 FAM151AQ8WW52 585 aa18.6■□□□□ 0.57
CTSD-207ENST00000636571 CDCA5Q96FF9 252 aa18.6■□□□□ 0.57
CTSD-207ENST00000636571 CYP2D7A0A087X1C5 515 aa18.59■□□□□ 0.57
CTSD-207ENST00000636571 CYP2D6P10635 497 aa18.59■□□□□ 0.57
CTSD-207ENST00000636571 TNFAIP1Q13829 316 aa18.59■□□□□ 0.57
CTSD-207ENST00000636571 RBM46Q8TBY0 533 aaKnown RBP18.59■□□□□ 0.57
CTSD-207ENST00000636571 SGSM2O43147 1006 aa18.58■□□□□ 0.57
CTSD-207ENST00000636571 ENTPD3O75355 529 aa18.58■□□□□ 0.57
CTSD-207ENST00000636571 APPP05067 770 aa18.58■□□□□ 0.57
CTSD-207ENST00000636571 TNNI2P48788 182 aa18.58■□□□□ 0.57
CTSD-207ENST00000636571 CERS3Q8IU89 383 aa18.58■□□□□ 0.57
CTSD-207ENST00000636571 ZSCAN29Q8IWY8 852 aaPredicted RBP18.58■□□□□ 0.57
CTSD-207ENST00000636571 ESYT1Q9BSJ8 1104 aa18.58■□□□□ 0.57
CTSD-207ENST00000636571 ZNF408Q9H9D4 720 aa18.58■□□□□ 0.57
CTSD-207ENST00000636571 HSPD1P10809 573 aaKnown RBP18.58■□□□□ 0.56
CTSD-207ENST00000636571 CASC1Q6TDU7 716 aa18.58■□□□□ 0.56
CTSD-207ENST00000636571 MCM9Q9NXL9 1143 aa18.58■□□□□ 0.56
CTSD-207ENST00000636571 TRPM7Q96QT4 1865 aa18.57■□□□□ 0.56
CTSD-207ENST00000636571 FAM196BA6NMK8 535 aa18.57■□□□□ 0.56
CTSD-207ENST00000636571 MFAP1P55081 439 aaKnown RBP18.57■□□□□ 0.56
CTSD-207ENST00000636571 PTH1RQ03431 593 aa18.57■□□□□ 0.56
CTSD-207ENST00000636571 PRKG1Q13976 671 aa18.57■□□□□ 0.56
CTSD-207ENST00000636571 IFNL3Q8IZI9 196 aa18.57■□□□□ 0.56
CTSD-207ENST00000636571 PATL2C9JE40 543 aaKnown RBP18.56■□□□□ 0.56
CTSD-207ENST00000636571 NPM3O75607 178 aaKnown RBP18.56■□□□□ 0.56
CTSD-207ENST00000636571 PLCD1P51178 756 aa18.56■□□□□ 0.56
CTSD-207ENST00000636571 MIGA2Q7L4E1 593 aa18.56■□□□□ 0.56
CTSD-207ENST00000636571 CSRNP1Q96S65 589 aa18.56■□□□□ 0.56
CTSD-207ENST00000636571 ATP8A2Q9NTI2 1148 aa18.56■□□□□ 0.56
CTSD-207ENST00000636571 PASKQ96RG2 1323 aa18.56■□□□□ 0.56
CTSD-207ENST00000636571 GNAT2P19087 354 aa18.55■□□□□ 0.56
CTSD-207ENST00000636571 CTR9Q6PD62 1173 aa18.55■□□□□ 0.56
CTSD-207ENST00000636571 MOB2Q70IA6 237 aa18.55■□□□□ 0.56
CTSD-207ENST00000636571 RUFY2Q8WXA3 655 aa18.55■□□□□ 0.56
CTSD-207ENST00000636571 PPP2R3BQ9Y5P8 575 aa18.55■□□□□ 0.56
CTSD-207ENST00000636571 RAD50Q92878 1312 aa18.55■□□□□ 0.56
CTSD-207ENST00000636571 ATRNL1Q5VV63 1379 aa18.55■□□□□ 0.56
CTSD-207ENST00000636571 LAMB1P07942 1786 aa18.55■□□□□ 0.56
CTSD-207ENST00000636571 USP17L12C9JPN9 530 aa18.55■□□□□ 0.56
CTSD-207ENST00000636571 USP17L21D6R901 530 aa18.55■□□□□ 0.56
CTSD-207ENST00000636571 CST9Q5W186 159 aa18.55■□□□□ 0.56
CTSD-207ENST00000636571 STK11IPQ8N1F8 1099 aa18.55■□□□□ 0.56
CTSD-207ENST00000636571 RPAP1Q9BWH6 1393 aaPredicted RBP18.54■□□□□ 0.56
CTSD-207ENST00000636571 CELF2O95319 508 aaKnown RBP18.54■□□□□ 0.56
CTSD-207ENST00000636571 TDO2P48775 406 aa18.54■□□□□ 0.56
CTSD-207ENST00000636571 FGAP02671 866 aa18.53■□□□□ 0.56
CTSD-207ENST00000636571 POLR3DP05423 398 aaPredicted RBP18.53■□□□□ 0.56
CTSD-207ENST00000636571 DYNLL2Q96FJ2 89 aa18.53■□□□□ 0.56
CTSD-207ENST00000636571 DNAJC18Q9H819 358 aa18.53■□□□□ 0.56
CTSD-207ENST00000636571 COL2A1P02458 1487 aaPredicted RBP18.53■□□□□ 0.56
CTSD-207ENST00000636571 MINDY4BA8MYZ0 360 aa18.53■□□□□ 0.56
CTSD-207ENST00000636571 FSTL1Q12841 308 aa18.53■□□□□ 0.56
CTSD-207ENST00000636571 NAPBQ9H115 298 aa18.53■□□□□ 0.56
CTSD-207ENST00000636571 TSHZ2Q9NRE2 1034 aa18.53■□□□□ 0.56
CTSD-207ENST00000636571 SLC44A5Q8NCS7 719 aa18.52■□□□□ 0.55
CTSD-207ENST00000636571 LSG1Q9H089 658 aaKnown RBP18.52■□□□□ 0.55
CTSD-207ENST00000636571 ANO2Q9NQ90 1003 aa18.52■□□□□ 0.55
CTSD-207ENST00000636571 OTOFQ9HC10 1997 aa18.52■□□□□ 0.55
CTSD-207ENST00000636571 HAND2P61296 217 aa18.51■□□□□ 0.55
CTSD-207ENST00000636571 C12orf60Q5U649 245 aa18.51■□□□□ 0.55
CTSD-207ENST00000636571 GIMAP6Q6P9H5 292 aa18.51■□□□□ 0.55
CTSD-207ENST00000636571 DDRGK1Q96HY6 314 aa18.51■□□□□ 0.55
CTSD-207ENST00000636571 NACAP1Q9BZK3 213 aa18.51■□□□□ 0.55
CTSD-207ENST00000636571 TACC3Q9Y6A5 838 aa18.51■□□□□ 0.55
CTSD-207ENST00000636571 CTDSPL2Q05D32 466 aa18.5■□□□□ 0.55
CTSD-207ENST00000636571 RRP1BQ14684 758 aaKnown RBP18.5■□□□□ 0.55
CTSD-207ENST00000636571 SUPT20HL1Q3ZLR7 823 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms