RNA–Protein interactions for RNA: ENST00000636271.1

CHRNA7-212, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 1,974 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-212ENST00000636271 STRBPQ96SI9 672 aaKnown RBP18.42■□□□□ 0.54
CHRNA7-212ENST00000636271 ARMT1Q9H993 441 aa18.42■□□□□ 0.54
CHRNA7-212ENST00000636271 FER1L6Q2WGJ9 1857 aa18.42■□□□□ 0.54
CHRNA7-212ENST00000636271 EXOSC10Q01780 885 aaKnown RBP18.42■□□□□ 0.54
CHRNA7-212ENST00000636271 STRIP1Q5VSL9 837 aa18.42■□□□□ 0.54
CHRNA7-212ENST00000636271 LCORLQ8N3X6 602 aa18.42■□□□□ 0.54
CHRNA7-212ENST00000636271 AIDAQ96BJ3 306 aa18.42■□□□□ 0.54
CHRNA7-212ENST00000636271 VPS33BQ9H267 617 aa18.42■□□□□ 0.54
CHRNA7-212ENST00000636271 USP17L3A6NCW0 530 aa18.41■□□□□ 0.54
CHRNA7-212ENST00000636271 USP17L4A6NCW7 530 aa18.41■□□□□ 0.54
CHRNA7-212ENST00000636271 USP17L1Q7RTZ2 530 aa18.41■□□□□ 0.54
CHRNA7-212ENST00000636271 PPP1R9BQ96SB3 815 aa18.41■□□□□ 0.54
CHRNA7-212ENST00000636271 RIOK1Q9BRS2 568 aaKnown RBP18.41■□□□□ 0.54
CHRNA7-212ENST00000636271 LRRC2Q9BYS8 371 aa18.41■□□□□ 0.54
CHRNA7-212ENST00000636271 CTNNA3Q9UI47 895 aa18.41■□□□□ 0.54
CHRNA7-212ENST00000636271 F8W031 263 aaPredicted RBP18.41■□□□□ 0.54
CHRNA7-212ENST00000636271 DYNLL1P63167 89 aaKnown RBP18.41■□□□□ 0.54
CHRNA7-212ENST00000636271 AGXT2Q9BYV1 514 aa18.41■□□□□ 0.54
CHRNA7-212ENST00000636271 LTBP3Q9NS15 1303 aa18.4■□□□□ 0.54
CHRNA7-212ENST00000636271 PRKAB2O43741 272 aa18.4■□□□□ 0.54
CHRNA7-212ENST00000636271 YBX3P16989 372 aaKnown RBP eCLIP18.4■□□□□ 0.54
CHRNA7-212ENST00000636271 TRIM44Q96DX7 344 aaPredicted RBP18.4■□□□□ 0.54
CHRNA7-212ENST00000636271 MAGEB6P1A0A0J9YX57 407 aa18.39■□□□□ 0.53
CHRNA7-212ENST00000636271 PFKFB2O60825 505 aa18.39■□□□□ 0.53
CHRNA7-212ENST00000636271 RAD17O75943 681 aa18.39■□□□□ 0.53
CHRNA7-212ENST00000636271 AATFQ9NY61 560 aaKnown RBP eCLIP18.39■□□□□ 0.53
CHRNA7-212ENST00000636271 ZNRF3Q9ULT6 936 aa18.39■□□□□ 0.53
CHRNA7-212ENST00000636271 JAK2O60674 1132 aa18.39■□□□□ 0.53
CHRNA7-212ENST00000636271 KRT85P78386 507 aa18.39■□□□□ 0.53
CHRNA7-212ENST00000636271 SCRN1Q12765 414 aa18.39■□□□□ 0.53
CHRNA7-212ENST00000636271 CCDC183Q5T5S1 534 aa18.39■□□□□ 0.53
CHRNA7-212ENST00000636271 ARHGAP27Q6ZUM4 889 aa18.39■□□□□ 0.53
CHRNA7-212ENST00000636271 NIM1KQ8IY84 436 aa18.39■□□□□ 0.53
CHRNA7-212ENST00000636271 LLPHQ9BRT6 129 aaKnown RBP18.39■□□□□ 0.53
CHRNA7-212ENST00000636271 RRAGDQ9NQL2 400 aaPredicted RBP18.39■□□□□ 0.53
CHRNA7-212ENST00000636271 ARFGEF1Q9Y6D6 1849 aa18.38■□□□□ 0.53
CHRNA7-212ENST00000636271 IMMTQ16891 758 aaKnown RBP18.38■□□□□ 0.53
CHRNA7-212ENST00000636271 FERMT3Q86UX7 667 aa18.38■□□□□ 0.53
CHRNA7-212ENST00000636271 TSPY26PQ9H489 355 aa18.38■□□□□ 0.53
CHRNA7-212ENST00000636271 TTF2Q9UNY4 1162 aaKnown RBP18.38■□□□□ 0.53
CHRNA7-212ENST00000636271 PSMD14O00487 310 aa18.37■□□□□ 0.53
CHRNA7-212ENST00000636271 SCNN1DP51172 638 aa18.37■□□□□ 0.53
CHRNA7-212ENST00000636271 KIAA0825Q8IV33 1275 aa18.37■□□□□ 0.53
CHRNA7-212ENST00000636271 SUGT1Q9Y2Z0 365 aa18.37■□□□□ 0.53
CHRNA7-212ENST00000636271 GSG1L2A8MUP6 293 aa18.37■□□□□ 0.53
CHRNA7-212ENST00000636271 IGSF3O75054 1194 aa18.37■□□□□ 0.53
CHRNA7-212ENST00000636271 FGAP02671 866 aa18.37■□□□□ 0.53
CHRNA7-212ENST00000636271 GSTO1P78417 241 aa18.37■□□□□ 0.53
CHRNA7-212ENST00000636271 APOBRQ0VD83 1088 aa18.37■□□□□ 0.53
CHRNA7-212ENST00000636271 SMARCC2Q8TAQ2 1214 aa18.37■□□□□ 0.53
CHRNA7-212ENST00000636271 JDP2Q8WYK2 163 aa18.37■□□□□ 0.53
CHRNA7-212ENST00000636271 EPB41L4AQ9HCS5 686 aaPredicted RBP18.37■□□□□ 0.53
CHRNA7-212ENST00000636271 MROH7-TTC4A0A0A0MT08 1334 aa18.36■□□□□ 0.53
CHRNA7-212ENST00000636271 FKBP1AP62942 108 aaKnown RBP18.36■□□□□ 0.53
CHRNA7-212ENST00000636271 CXCL9Q07325 125 aa18.36■□□□□ 0.53
CHRNA7-212ENST00000636271 TMED8Q6PL24 325 aaPredicted RBP18.36■□□□□ 0.53
CHRNA7-212ENST00000636271 FBXL16Q8N461 479 aa18.36■□□□□ 0.53
CHRNA7-212ENST00000636271 SDR42E1Q8WUS8 393 aa18.36■□□□□ 0.53
CHRNA7-212ENST00000636271 SLC4A4Q9Y6R1 1079 aa18.36■□□□□ 0.53
CHRNA7-212ENST00000636271 ZNF646O15015 1829 aaPredicted RBP18.36■□□□□ 0.53
CHRNA7-212ENST00000636271 PATL2C9JE40 543 aaKnown RBP18.35■□□□□ 0.53
CHRNA7-212ENST00000636271 LETM1O95202 739 aaPredicted RBP18.35■□□□□ 0.53
CHRNA7-212ENST00000636271 APPP05067 770 aa18.35■□□□□ 0.53
CHRNA7-212ENST00000636271 VIL1P09327 827 aaKnown RBP18.35■□□□□ 0.53
CHRNA7-212ENST00000636271 FAM163AQ96GL9 167 aaPredicted RBP18.35■□□□□ 0.53
CHRNA7-212ENST00000636271 DAGLAQ9Y4D2 1042 aa18.35■□□□□ 0.53
CHRNA7-212ENST00000636271 ELP1O95163 1332 aa18.35■□□□□ 0.53
CHRNA7-212ENST00000636271 LDHCP07864 332 aa18.35■□□□□ 0.53
CHRNA7-212ENST00000636271 HAND2P61296 217 aa18.35■□□□□ 0.53
CHRNA7-212ENST00000636271 TPRNQ4KMQ1 711 aa18.35■□□□□ 0.53
CHRNA7-212ENST00000636271 FAM184AQ8NB25 1140 aa18.35■□□□□ 0.53
CHRNA7-212ENST00000636271 ZNF274Q96GC6 653 aaPredicted RBP18.35■□□□□ 0.53
CHRNA7-212ENST00000636271 ZBTB12Q9Y330 459 aaPredicted RBP18.35■□□□□ 0.53
CHRNA7-212ENST00000636271 MAST2Q6P0Q8 1798 aa18.34■□□□□ 0.53
CHRNA7-212ENST00000636271 GAKO14976 1311 aa18.34■□□□□ 0.53
CHRNA7-212ENST00000636271 GPR75-ASB3A0A0A6YYF3 556 aa18.34■□□□□ 0.53
CHRNA7-212ENST00000636271 BTDP43251 543 aa18.34■□□□□ 0.53
CHRNA7-212ENST00000636271 HMGN5P82970 282 aaKnown RBP18.34■□□□□ 0.53
CHRNA7-212ENST00000636271 FAM173BQ6P4H8 233 aa18.34■□□□□ 0.53
CHRNA7-212ENST00000636271 TTC6Q86TZ1 520 aa18.34■□□□□ 0.53
CHRNA7-212ENST00000636271 IFNL3Q8IZI9 196 aa18.34■□□□□ 0.53
CHRNA7-212ENST00000636271 NSUN7Q8NE18 718 aaKnown RBP18.34■□□□□ 0.53
CHRNA7-212ENST00000636271 DDX11Q96FC9 970 aa18.34■□□□□ 0.53
CHRNA7-212ENST00000636271 PCDHAC2Q9Y5I4 1007 aa18.34■□□□□ 0.53
CHRNA7-212ENST00000636271 CCDC88AQ3V6T2 1871 aa18.34■□□□□ 0.53
CHRNA7-212ENST00000636271 PPP4CP60510 307 aa18.33■□□□□ 0.53
CHRNA7-212ENST00000636271 RSBN1LQ6PCB5 846 aaPredicted RBP18.33■□□□□ 0.53
CHRNA7-212ENST00000636271 CHST3Q7LGC8 479 aa18.33■□□□□ 0.53
CHRNA7-212ENST00000636271 SH3RF3Q8TEJ3 882 aaPredicted RBP18.33■□□□□ 0.53
CHRNA7-212ENST00000636271 CHMP4CQ96CF2 233 aa18.33■□□□□ 0.53
CHRNA7-212ENST00000636271 GMLQ99445 158 aa18.33■□□□□ 0.53
CHRNA7-212ENST00000636271 SCAND2PQ9GZW5 306 aaPredicted RBP18.33■□□□□ 0.53
CHRNA7-212ENST00000636271 H3BQV1 296 aa18.33■□□□□ 0.52
CHRNA7-212ENST00000636271 ZNF213O14771 459 aa18.33■□□□□ 0.52
CHRNA7-212ENST00000636271 GNAT2P19087 354 aa18.33■□□□□ 0.52
CHRNA7-212ENST00000636271 PDIA3P30101 505 aaKnown RBP18.33■□□□□ 0.52
CHRNA7-212ENST00000636271 EVCP57679 992 aa18.33■□□□□ 0.52
CHRNA7-212ENST00000636271 IFFO2Q5TF58 517 aa18.33■□□□□ 0.52
CHRNA7-212ENST00000636271 KIF3AQ9Y496 699 aa18.33■□□□□ 0.52
CHRNA7-212ENST00000636271 PTPDC1A2A3K4 754 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms